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Rosetta Utilities
2014.35
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Rosetta Utilities
2014.35
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Namespaces | |
| ligand | |
Functions | |
| BooleanOptionKey const | kick_relax ("docking:kick_relax") |
| BooleanOptionKey const | docking ("docking") |
| BooleanOptionKey const | view ("docking:view") |
| BooleanOptionKey const | no_filters ("docking:no_filters") |
| StringVectorOptionKey const | design_chains ("docking:design_chains") |
| FileOptionKey const | recover_sidechains ("docking:recover_sidechains") |
| StringOptionKey const | partners ("docking:partners") |
| BooleanOptionKey const | docking_local_refine ("docking:docking_local_refine") |
| BooleanOptionKey const | low_res_protocol_only ("docking:low_res_protocol_only") |
| BooleanOptionKey const | randomize1 ("docking:randomize1") |
| BooleanOptionKey const | randomize2 ("docking:randomize2") |
| BooleanOptionKey const | use_ellipsoidal_randomization ("docking:use_ellipsoidal_randomization") |
| BooleanOptionKey const | spin ("docking:spin") |
| RealVectorOptionKey const | dock_pert ("docking:dock_pert") |
| RealOptionKey const | uniform_trans ("docking:uniform_trans") |
| BooleanOptionKey const | center_at_interface ("docking:center_at_interface") |
| IntegerOptionKey const | dock_mcm_first_cycles ("docking:dock_mcm_first_cycles") |
| IntegerOptionKey const | dock_mcm_second_cycles ("docking:dock_mcm_second_cycles") |
| IntegerOptionKey const | docking_centroid_outer_cycles ("docking:docking_centroid_outer_cycles") |
| IntegerOptionKey const | docking_centroid_inner_cycles ("docking:docking_centroid_inner_cycles") |
| BooleanOptionKey const | dock_min ("docking:dock_min") |
| StringOptionKey const | flexible_bb_docking ("docking:flexible_bb_docking") |
| RealOptionKey const | flexible_bb_docking_interface_dist ("docking:flexible_bb_docking_interface_dist") |
| StringOptionKey const | ensemble1 ("docking:ensemble1") |
| StringOptionKey const | ensemble2 ("docking:ensemble2") |
| RealOptionKey const | dock_mcm_trans_magnitude ("docking:dock_mcm_trans_magnitude") |
| RealOptionKey const | dock_mcm_rot_magnitude ("docking:dock_mcm_rot_magnitude") |
| RealOptionKey const | minimization_threshold ("docking:minimization_threshold") |
| RealOptionKey const | temperature ("docking:temperature") |
| IntegerOptionKey const | repack_period ("docking:repack_period") |
| BooleanOptionKey const | extra_rottrial ("docking:extra_rottrial") |
| BooleanOptionKey const | dock_rtmin ("docking:dock_rtmin") |
| BooleanOptionKey const | sc_min ("docking:sc_min") |
| BooleanOptionKey const | norepack1 ("docking:norepack1") |
| BooleanOptionKey const | norepack2 ("docking:norepack2") |
| IntegerVectorOptionKey const | bb_min_res ("docking:bb_min_res") |
| IntegerVectorOptionKey const | sc_min_res ("docking:sc_min_res") |
| BooleanOptionKey const | dock_ppk ("docking:dock_ppk") |
| IntegerOptionKey const | max_repeats ("docking:max_repeats") |
| RealVectorOptionKey const | dock_lowres_filter ("docking:dock_lowres_filter") |
| IntegerVectorOptionKey const | multibody ("docking:multibody") |
| BooleanOptionKey const | ignore_default_docking_task ("docking:ignore_default_docking_task") |
| StringOptionKey const | low_patch ("docking:low_patch") |
| StringOptionKey const | high_patch ("docking:high_patch") |
| StringOptionKey const | high_min_patch ("docking:high_min_patch") |
| StringOptionKey const | pack_patch ("docking:pack_patch") |
| BooleanOptionKey const | use_legacy_protocol ("docking:use_legacy_protocol") |
| RealOptionKey const | docklowres_trans_magnitude ("docking:docklowres_trans_magnitude") |
| RealOptionKey const | docklowres_rot_magnitude ("docking:docklowres_rot_magnitude") |
| IntegerVectorOptionKey const docking::bb_min_res | ( | "docking:bb_min_res" | ) |
| BooleanOptionKey const docking::center_at_interface | ( | "docking:center_at_interface" | ) |
| StringVectorOptionKey const docking::design_chains | ( | "docking:design_chains" | ) |
| RealVectorOptionKey const docking::dock_lowres_filter | ( | "docking:dock_lowres_filter" | ) |
| IntegerOptionKey const docking::dock_mcm_first_cycles | ( | "docking:dock_mcm_first_cycles" | ) |
| RealOptionKey const docking::dock_mcm_rot_magnitude | ( | "docking:dock_mcm_rot_magnitude" | ) |
| IntegerOptionKey const docking::dock_mcm_second_cycles | ( | "docking:dock_mcm_second_cycles" | ) |
| RealOptionKey const docking::dock_mcm_trans_magnitude | ( | "docking:dock_mcm_trans_magnitude" | ) |
| BooleanOptionKey const docking::dock_min | ( | "docking:dock_min" | ) |
| RealVectorOptionKey const docking::dock_pert | ( | "docking:dock_pert" | ) |
| BooleanOptionKey const docking::dock_ppk | ( | "docking:dock_ppk" | ) |
| BooleanOptionKey const docking::dock_rtmin | ( | "docking:dock_rtmin" | ) |
| BooleanOptionKey const docking::docking | ( | "docking" | ) |
| IntegerOptionKey const docking::docking_centroid_inner_cycles | ( | "docking:docking_centroid_inner_cycles" | ) |
| IntegerOptionKey const docking::docking_centroid_outer_cycles | ( | "docking:docking_centroid_outer_cycles" | ) |
| BooleanOptionKey const docking::docking_local_refine | ( | "docking:docking_local_refine" | ) |
| RealOptionKey const docking::docklowres_rot_magnitude | ( | "docking:docklowres_rot_magnitude" | ) |
| RealOptionKey const docking::docklowres_trans_magnitude | ( | "docking:docklowres_trans_magnitude" | ) |
| StringOptionKey const docking::ensemble1 | ( | "docking:ensemble1" | ) |
| StringOptionKey const docking::ensemble2 | ( | "docking:ensemble2" | ) |
| BooleanOptionKey const docking::extra_rottrial | ( | "docking:extra_rottrial" | ) |
| StringOptionKey const docking::flexible_bb_docking | ( | "docking:flexible_bb_docking" | ) |
| RealOptionKey const docking::flexible_bb_docking_interface_dist | ( | "docking:flexible_bb_docking_interface_dist" | ) |
| StringOptionKey const docking::high_min_patch | ( | "docking:high_min_patch" | ) |
| StringOptionKey const docking::high_patch | ( | "docking:high_patch" | ) |
| BooleanOptionKey const docking::ignore_default_docking_task | ( | "docking:ignore_default_docking_task" | ) |
| BooleanOptionKey const docking::kick_relax | ( | "docking:kick_relax" | ) |
| StringOptionKey const docking::low_patch | ( | "docking:low_patch" | ) |
| BooleanOptionKey const docking::low_res_protocol_only | ( | "docking:low_res_protocol_only" | ) |
| IntegerOptionKey const docking::max_repeats | ( | "docking:max_repeats" | ) |
| RealOptionKey const docking::minimization_threshold | ( | "docking:minimization_threshold" | ) |
| IntegerVectorOptionKey const docking::multibody | ( | "docking:multibody" | ) |
| BooleanOptionKey const docking::no_filters | ( | "docking:no_filters" | ) |
| BooleanOptionKey const docking::norepack1 | ( | "docking:norepack1" | ) |
| BooleanOptionKey const docking::norepack2 | ( | "docking:norepack2" | ) |
| StringOptionKey const docking::pack_patch | ( | "docking:pack_patch" | ) |
| StringOptionKey const docking::partners | ( | "docking:partners" | ) |
| BooleanOptionKey const docking::randomize1 | ( | "docking:randomize1" | ) |
| BooleanOptionKey const docking::randomize2 | ( | "docking:randomize2" | ) |
| FileOptionKey const docking::recover_sidechains | ( | "docking:recover_sidechains" | ) |
| IntegerOptionKey const docking::repack_period | ( | "docking:repack_period" | ) |
| BooleanOptionKey const docking::sc_min | ( | "docking:sc_min" | ) |
| IntegerVectorOptionKey const docking::sc_min_res | ( | "docking:sc_min_res" | ) |
| BooleanOptionKey const docking::spin | ( | "docking:spin" | ) |
| RealOptionKey const docking::temperature | ( | "docking:temperature" | ) |
| RealOptionKey const docking::uniform_trans | ( | "docking:uniform_trans" | ) |
| BooleanOptionKey const docking::use_ellipsoidal_randomization | ( | "docking:use_ellipsoidal_randomization" | ) |
| BooleanOptionKey const docking::use_legacy_protocol | ( | "docking:use_legacy_protocol" | ) |
| BooleanOptionKey const docking::view | ( | "docking:view" | ) |
1.8.7