numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real > Class Template Reference

#include <CoordinateArray_RMSD_FlatLookup.hh>

Public Member Functions
	CoordinateArray_RMSD_FlatLookup (Real *entry_coordinates, Real *entry_radii, numeric::Size num_entries, numeric::Size coordinates_per_entry)
virtual void	prepare_for_query (Real *&q)
virtual Real	entry_distance (Real *&q, numeric::Size &e)
virtual Real	entry_radius (numeric::Size &e)
Public Member Functions inherited from numeric::coordinate_fitting::FlatLookup< Real *, numeric::Size, Real >
	~FlatLookup ()
void	initialize (InputIterator first, InputIterator last)
bool	first_match (Real *&query, numeric::Size &entry, Real &distance)
bool	closest_match (Real *&query, numeric::Size &entry, Real &distance)

Public Attributes
Real *	entry_coordinates
Real *	entry_radii
numeric::Size	num_entries
numeric::Size	coordinates_per_entry
numeric::Size	entry_size
numeric::alignment::QCP_Kernel < Real >	kernel
Public Attributes inherited from numeric::coordinate_fitting::FlatLookup< Real *, numeric::Size, Real >
std::vector< numeric::Size >	entries

Constructor & Destructor Documentation

template<class Real = double>

numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::CoordinateArray_RMSD_FlatLookup ( Real *  entry_coordinates, Real *  entry_radii, numeric::Size  num_entries, numeric::Size  coordinates_per_entry  )

inline

References numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::entry_size, numeric::coordinate_fitting::FlatLookup< Real *, numeric::Size, Real >::initialize(), numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::kernel, and numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::num_entries.

Member Function Documentation

template<class Real = double>

virtual Real numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::entry_distance ( Real *&  q, numeric::Size &  e  )

inlinevirtual

Implements numeric::coordinate_fitting::FlatLookup< Real *, numeric::Size, Real >.

References numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::coordinates_per_entry, numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::entry_coordinates, numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::entry_size, and numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::kernel.

template<class Real = double>

virtual Real numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::entry_radius ( numeric::Size &  e )

inlinevirtual

Implements numeric::coordinate_fitting::FlatLookup< Real *, numeric::Size, Real >.

References numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::entry_radii.

template<class Real = double>

virtual void numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::prepare_for_query ( Real *&  q )

inlinevirtual

Reimplemented from numeric::coordinate_fitting::FlatLookup< Real *, numeric::Size, Real >.

References numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::coordinates_per_entry, and numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::kernel.

Member Data Documentation

template<class Real = double>

numeric::Size numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::coordinates_per_entry

Referenced by numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::entry_distance(), and numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::prepare_for_query().

template<class Real = double>

Real* numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::entry_coordinates

Referenced by numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::entry_distance().

template<class Real = double>

Real* numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::entry_radii

Referenced by numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::entry_radius().

template<class Real = double>

numeric::Size numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::entry_size

Referenced by numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::CoordinateArray_RMSD_FlatLookup(), and numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::entry_distance().

template<class Real = double>

numeric::alignment::QCP_Kernel<Real> numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::kernel

Referenced by numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::CoordinateArray_RMSD_FlatLookup(), numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::entry_distance(), and numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::prepare_for_query().

template<class Real = double>

numeric::Size numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::num_entries

Referenced by numeric::coordinate_fitting::CoordinateArray_RMSD_FlatLookup< Real >::CoordinateArray_RMSD_FlatLookup().

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The documentation for this class was generated from the following file:

• src/numeric/coordinate_fitting/CoordinateArray_RMSD_FlatLookup.hh