basic::options::OptionKeys::smhybrid Namespace Reference

Variables
BooleanOptionKey const	smhybrid ("smhybrid")
BooleanOptionKey const	add_cavities ("smhybrid:add_cavities")
BooleanOptionKey const	abinitio_design ("smhybrid:abinitio_design")
BooleanOptionKey const	fa_refine ("smhybrid:fa_refine")
BooleanOptionKey const	virtual_nterm ("smhybrid:virtual_nterm")
BooleanOptionKey const	debug ("smhybrid:debug")
BooleanOptionKey const	refine ("smhybrid:refine")
BooleanOptionKey const	centroid_all_val ("smhybrid:centroid_all_val")
BooleanOptionKey const	subsubs_attract ("smhybrid:subsubs_attract")
BooleanOptionKey const	linker_cst ("smhybrid:linker_cst")
BooleanOptionKey const	pseudosym ("smhybrid:pseudosym")
BooleanOptionKey const	design_linker ("smhybrid:design_linker")
BooleanOptionKey const	design ("smhybrid:design")
BooleanOptionKey const	restrict_design_to_interface ("smhybrid:restrict_design_to_interface")
BooleanOptionKey const	restrict_design_to_subsub_interface ("smhybrid:restrict_design_to_subsub_interface")
BooleanOptionKey const	design_hydrophobic ("smhybrid:design_hydrophobic")
BooleanOptionKey const	add_metal_at_0 ("smhybrid:add_metal_at_0")
IntegerOptionKey const	nres_mono ("smhybrid:nres_mono")
IntegerOptionKey const	abinitio_cycles ("smhybrid:abinitio_cycles")
IntegerOptionKey const	primary_subsubunit ("smhybrid:primary_subsubunit")
IntegerOptionKey const	minbb ("smhybrid:minbb")
IntegerOptionKey const	switch_concert_sub ("smhybrid:switch_concert_sub")
RealOptionKey const	temperature ("smhybrid:temperature")
BooleanOptionKey const	inter_subsub_cst ("smhybrid:inter_subsub_cst")
RealOptionKey const	rb_mag ("smhybrid:rb_mag")
FileOptionKey const	symm_def_template ("smhybrid:symm_def_template")
FileOptionKey const	symm_def_template_reduced ("smhybrid:symm_def_template_reduced")
IntegerVectorOptionKey const	attach_as_sc ("smhybrid:attach_as_sc")
IntegerVectorOptionKey const	attach_as_sc_sub ("smhybrid:attach_as_sc_sub")
BooleanVectorOptionKey const	chainbreaks ("smhybrid:chainbreaks")
StringVectorOptionKey const	design_res_files ("smhybrid:design_res_files")
StringVectorOptionKey const	fixed_res_files ("smhybrid:fixed_res_files")
StringVectorOptionKey const	frag_res_files ("smhybrid:frag_res_files")
StringVectorOptionKey const	scattach_res_files ("smhybrid:scattach_res_files")
StringVectorOptionKey const	rep_edge_files ("smhybrid:rep_edge_files")
StringVectorOptionKey const	virtual_res_files ("smhybrid:virtual_res_files")
StringVectorOptionKey const	jumpcut_files ("smhybrid:jumpcut_files")
StringVectorOptionKey const	cst_sub_files ("smhybrid:cst_sub_files")
StringVectorOptionKey const	symm_file_tag ("smhybrid:symm_file_tag")
StringVectorOptionKey const	attach_atom ("smhybrid:attach_atom")
StringVectorOptionKey const	add_res_before ("smhybrid:add_res_before")
StringVectorOptionKey const	add_res_after ("smhybrid:add_res_after")
StringVectorOptionKey const	add_ss_before ("smhybrid:add_ss_before")
StringVectorOptionKey const	add_ss_after ("smhybrid:add_ss_after")
StringVectorOptionKey const	add_atom_at_cen ("smhybrid:add_atom_at_cen")
StringVectorOptionKey const	attach_rsd ("smhybrid:attach_rsd")

Variable Documentation

IntegerOptionKey const basic::options::OptionKeys::smhybrid::abinitio_cycles

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::smhybrid::abinitio_design

Referenced by add_rosetta_options_3().

StringVectorOptionKey const basic::options::OptionKeys::smhybrid::add_atom_at_cen

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::smhybrid::add_cavities

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::smhybrid::add_metal_at_0

Referenced by add_rosetta_options_3().

StringVectorOptionKey const basic::options::OptionKeys::smhybrid::add_res_after

Referenced by add_rosetta_options_3().

StringVectorOptionKey const basic::options::OptionKeys::smhybrid::add_res_before

Referenced by add_rosetta_options_3().

StringVectorOptionKey const basic::options::OptionKeys::smhybrid::add_ss_after

Referenced by add_rosetta_options_3().

StringVectorOptionKey const basic::options::OptionKeys::smhybrid::add_ss_before

Referenced by add_rosetta_options_3().

IntegerVectorOptionKey const basic::options::OptionKeys::smhybrid::attach_as_sc

Referenced by add_rosetta_options_3().

IntegerVectorOptionKey const basic::options::OptionKeys::smhybrid::attach_as_sc_sub

Referenced by add_rosetta_options_3().

StringVectorOptionKey const basic::options::OptionKeys::smhybrid::attach_atom

Referenced by add_rosetta_options_3().

StringVectorOptionKey const basic::options::OptionKeys::smhybrid::attach_rsd

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::smhybrid::centroid_all_val

Referenced by add_rosetta_options_3().

BooleanVectorOptionKey const basic::options::OptionKeys::smhybrid::chainbreaks

Referenced by add_rosetta_options_3().

StringVectorOptionKey const basic::options::OptionKeys::smhybrid::cst_sub_files

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::smhybrid::debug

Referenced by add_rosetta_options_0(), add_rosetta_options_1(), add_rosetta_options_2(), and add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::smhybrid::design

Referenced by add_rosetta_options_1(), add_rosetta_options_2(), and add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::smhybrid::design_hydrophobic

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::smhybrid::design_linker

Referenced by add_rosetta_options_3().

StringVectorOptionKey const basic::options::OptionKeys::smhybrid::design_res_files

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::smhybrid::fa_refine

Referenced by add_rosetta_options_3().

StringVectorOptionKey const basic::options::OptionKeys::smhybrid::fixed_res_files

Referenced by add_rosetta_options_3().

StringVectorOptionKey const basic::options::OptionKeys::smhybrid::frag_res_files

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::smhybrid::inter_subsub_cst

Referenced by add_rosetta_options_3().

StringVectorOptionKey const basic::options::OptionKeys::smhybrid::jumpcut_files

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::smhybrid::linker_cst

Referenced by add_rosetta_options_3().

IntegerOptionKey const basic::options::OptionKeys::smhybrid::minbb

Referenced by add_rosetta_options_3().

IntegerOptionKey const basic::options::OptionKeys::smhybrid::nres_mono

Referenced by add_rosetta_options_3().

IntegerOptionKey const basic::options::OptionKeys::smhybrid::primary_subsubunit

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::smhybrid::pseudosym

Referenced by add_rosetta_options_3().

RealOptionKey const basic::options::OptionKeys::smhybrid::rb_mag

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::smhybrid::refine

Referenced by add_rosetta_options_0(), add_rosetta_options_1(), and add_rosetta_options_3().

StringVectorOptionKey const basic::options::OptionKeys::smhybrid::rep_edge_files

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::smhybrid::restrict_design_to_interface

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::smhybrid::restrict_design_to_subsub_interface

Referenced by add_rosetta_options_3().

StringVectorOptionKey const basic::options::OptionKeys::smhybrid::scattach_res_files

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::smhybrid::smhybrid

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::smhybrid::subsubs_attract

Referenced by add_rosetta_options_3().

IntegerOptionKey const basic::options::OptionKeys::smhybrid::switch_concert_sub

Referenced by add_rosetta_options_3().

FileOptionKey const basic::options::OptionKeys::smhybrid::symm_def_template

Referenced by add_rosetta_options_3().

FileOptionKey const basic::options::OptionKeys::smhybrid::symm_def_template_reduced

Referenced by add_rosetta_options_3().

StringVectorOptionKey const basic::options::OptionKeys::smhybrid::symm_file_tag

Referenced by add_rosetta_options_3().

RealOptionKey const basic::options::OptionKeys::smhybrid::temperature

Referenced by add_rosetta_options_1(), and add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::smhybrid::virtual_nterm

Referenced by add_rosetta_options_3().

StringVectorOptionKey const basic::options::OptionKeys::smhybrid::virtual_res_files

Referenced by add_rosetta_options_3().