Rosetta Utilities  2014.35
Namespaces | Functions | Variables
basic::options::OptionKeys::optE Namespace Reference

Namespaces

 rescore
 

Functions

BooleanOptionKey const optE ("optE")
 
StringOptionKey const load_from_silent ("optE:load_from_silent")
 
StringOptionKey const data_in ("optE:data_in")
 
StringOptionKey const data_out ("optE:data_out")
 
StringOptionKey const weights ("optE:weights")
 
StringVectorOptionKey const fix ("optE:fix")
 
FileOptionKey const free ("optE:free")
 
FileOptionKey const fixed ("optE:fixed")
 
FileOptionKey const parse_tagfile ("optE:parse_tagfile")
 
FileOptionKey const constant_logic_taskops_file ("optE:constant_logic_taskops_file")
 
BooleanOptionKey const optE_soft_rep ("optE:optE_soft_rep")
 
BooleanOptionKey const no_hb_env_dependence ("optE:no_hb_env_dependence")
 
BooleanOptionKey const no_hb_env_dependence_DNA ("optE:no_hb_env_dependence_DNA")
 
BooleanOptionKey const optE_no_protein_fa_elec ("optE:optE_no_protein_fa_elec")
 
BooleanOptionKey const design_first ("optE:design_first")
 
IntegerOptionKey const n_design_cycles ("optE:n_design_cycles")
 
BooleanOptionKey const recover_nat_rot ("optE:recover_nat_rot")
 
FileOptionKey const component_weights ("optE:component_weights")
 
BooleanOptionKey const optimize_nat_aa ("optE:optimize_nat_aa")
 
BooleanOptionKey const optimize_nat_rot ("optE:optimize_nat_rot")
 
FileOptionKey const optimize_ligand_rot ("optE:optimize_ligand_rot")
 
BooleanOptionKey const optimize_pssm ("optE:optimize_pssm")
 
FileOptionKey const optimize_dGbinding ("optE:optimize_dGbinding")
 
FileOptionKey const optimize_ddG_bind_correlation ("optE:optimize_ddG_bind_correlation")
 
FileOptionKey const optimize_ddGmutation ("optE:optimize_ddGmutation")
 
BooleanOptionKey const optimize_ddGmutation_straight_mean ("optE:optimize_ddGmutation_straight_mean")
 
BooleanOptionKey const optimize_ddGmutation_boltzman_average ("optE:optimize_ddGmutation_boltzman_average")
 
RealOptionKey const exclude_badrep_ddGs ("optE:exclude_badrep_ddGs")
 
BooleanOptionKey const pretend_no_ddG_repulsion ("optE:pretend_no_ddG_repulsion")
 
FileOptionKey const optimize_decoy_discrimination ("optE:optimize_decoy_discrimination")
 
StringOptionKey const normalize_decoy_score_spread ("optE:normalize_decoy_score_spread")
 
BooleanOptionKey const ramp_nativeness ("optE:ramp_nativeness")
 
IntegerOptionKey const n_top_natives_to_optimize ("optE:n_top_natives_to_optimize")
 
RealOptionKey const approximate_decoy_entropy ("optE:approximate_decoy_entropy")
 
BooleanOptionKey const repack_and_minimize_decoys ("optE:repack_and_minimize_decoys")
 
BooleanOptionKey const repack_and_minimize_input_structures ("optE:repack_and_minimize_input_structures")
 
IntegerOptionKey const output_top_n_new_decoys ("optE:output_top_n_new_decoys")
 
FileOptionKey const optimize_ligand_discrimination ("optE:optimize_ligand_discrimination")
 
BooleanOptionKey const no_design ("optE:no_design")
 
BooleanOptionKey const sqrt_pssm ("optE:sqrt_pssm")
 
RealOptionKey const min_decoy_rms_to_native ("optE:min_decoy_rms_to_native")
 
RealOptionKey const max_rms_from_native ("optE:max_rms_from_native")
 
BooleanOptionKey const optimize_starting_free_weights ("optE:optimize_starting_free_weights")
 
FileOptionKey const wrap_dof_optimization ("optE:wrap_dof_optimization")
 
RealOptionKey const randomly_perturb_starting_free_weights ("optE:randomly_perturb_starting_free_weights")
 
RealOptionKey const inv_kT_natrot ("optE:inv_kT_natrot")
 
RealOptionKey const inv_kT_nataa ("optE:inv_kT_nataa")
 
RealOptionKey const inv_kT_natstruct ("optE:inv_kT_natstruct")
 
BooleanOptionKey const mpi_weight_minimization ("optE:mpi_weight_minimization")
 
BooleanOptionKey const dont_use_reference_energies ("optE:dont_use_reference_energies")
 
IntegerOptionKey const number_of_swarm_particles ("optE:number_of_swarm_particles")
 
IntegerOptionKey const number_of_swarm_cycles ("optE:number_of_swarm_cycles")
 
FileOptionKey const constrain_weights ("optE:constrain_weights")
 
BooleanOptionKey const fit_reference_energies_to_aa_profile_recovery ("optE:fit_reference_energies_to_aa_profile_recovery")
 
FileOptionKey const starting_refEs ("optE:starting_refEs")
 
BooleanOptionKey const repeat_swarm_optimization_until_fitness_improves ("optE:repeat_swarm_optimization_until_fitness_improves")
 
BooleanOptionKey const design_with_minpack ("optE:design_with_minpack")
 
BooleanOptionKey const limit_bad_scores ("optE:limit_bad_scores")
 
BooleanOptionKey const no_design_pdb_output ("optE:no_design_pdb_output")
 

Variables

BooleanOptionKey const optE
 
StringOptionKey const load_from_silent
 
StringOptionKey const data_in
 
StringOptionKey const data_out
 
StringOptionKey const weights
 
StringVectorOptionKey const fix
 
FileOptionKey const free
 
FileOptionKey const fixed
 
FileOptionKey const parse_tagfile
 
FileOptionKey const constant_logic_taskops_file
 
BooleanOptionKey const optE_soft_rep
 
BooleanOptionKey const no_hb_env_dependence
 
BooleanOptionKey const no_hb_env_dependence_DNA
 
BooleanOptionKey const optE_no_protein_fa_elec
 
BooleanOptionKey const design_first
 
IntegerOptionKey const n_design_cycles
 
BooleanOptionKey const recover_nat_rot
 
FileOptionKey const component_weights
 
BooleanOptionKey const optimize_nat_aa
 
BooleanOptionKey const optimize_nat_rot
 
FileOptionKey const optimize_ligand_rot
 
BooleanOptionKey const optimize_pssm
 
FileOptionKey const optimize_dGbinding
 
FileOptionKey const optimize_ddG_bind_correlation
 
FileOptionKey const optimize_ddGmutation
 
BooleanOptionKey const optimize_ddGmutation_straight_mean
 
BooleanOptionKey const optimize_ddGmutation_boltzman_average
 
RealOptionKey const exclude_badrep_ddGs
 
BooleanOptionKey const pretend_no_ddG_repulsion
 
FileOptionKey const optimize_decoy_discrimination
 
StringOptionKey const normalize_decoy_score_spread
 
BooleanOptionKey const ramp_nativeness
 
IntegerOptionKey const n_top_natives_to_optimize
 
RealOptionKey const approximate_decoy_entropy
 
BooleanOptionKey const repack_and_minimize_decoys
 
BooleanOptionKey const repack_and_minimize_input_structures
 
IntegerOptionKey const output_top_n_new_decoys
 
FileOptionKey const optimize_ligand_discrimination
 
BooleanOptionKey const no_design
 
BooleanOptionKey const sqrt_pssm
 
RealOptionKey const min_decoy_rms_to_native
 
RealOptionKey const max_rms_from_native
 
BooleanOptionKey const optimize_starting_free_weights
 
FileOptionKey const wrap_dof_optimization
 
RealOptionKey const randomly_perturb_starting_free_weights
 
RealOptionKey const inv_kT_natrot
 
RealOptionKey const inv_kT_nataa
 
RealOptionKey const inv_kT_natstruct
 
BooleanOptionKey const mpi_weight_minimization
 
BooleanOptionKey const dont_use_reference_energies
 
IntegerOptionKey const number_of_swarm_particles
 
IntegerOptionKey const number_of_swarm_cycles
 
FileOptionKey const constrain_weights
 
BooleanOptionKey const fit_reference_energies_to_aa_profile_recovery
 
FileOptionKey const starting_refEs
 
BooleanOptionKey const repeat_swarm_optimization_until_fitness_improves
 
BooleanOptionKey const design_with_minpack
 
BooleanOptionKey const limit_bad_scores
 
BooleanOptionKey const no_design_pdb_output
 

Function Documentation

RealOptionKey const basic::options::OptionKeys::optE::approximate_decoy_entropy ( "optE:approximate_decoy_entropy"  )
FileOptionKey const basic::options::OptionKeys::optE::component_weights ( "optE:component_weights"  )
FileOptionKey const basic::options::OptionKeys::optE::constant_logic_taskops_file ( "optE:constant_logic_taskops_file"  )
FileOptionKey const basic::options::OptionKeys::optE::constrain_weights ( "optE:constrain_weights"  )
StringOptionKey const basic::options::OptionKeys::optE::data_in ( "optE:data_in"  )
StringOptionKey const basic::options::OptionKeys::optE::data_out ( "optE:data_out"  )
BooleanOptionKey const basic::options::OptionKeys::optE::design_first ( "optE:design_first"  )
BooleanOptionKey const basic::options::OptionKeys::optE::design_with_minpack ( "optE:design_with_minpack"  )
BooleanOptionKey const basic::options::OptionKeys::optE::dont_use_reference_energies ( "optE:dont_use_reference_energies"  )
RealOptionKey const basic::options::OptionKeys::optE::exclude_badrep_ddGs ( "optE:exclude_badrep_ddGs"  )
BooleanOptionKey const basic::options::OptionKeys::optE::fit_reference_energies_to_aa_profile_recovery ( "optE:fit_reference_energies_to_aa_profile_recovery"  )
StringVectorOptionKey const basic::options::OptionKeys::optE::fix ( "optE:fix"  )
FileOptionKey const basic::options::OptionKeys::optE::fixed ( "optE:fixed"  )
FileOptionKey const basic::options::OptionKeys::optE::free ( "optE:free"  )
RealOptionKey const basic::options::OptionKeys::optE::inv_kT_nataa ( "optE:inv_kT_nataa"  )
RealOptionKey const basic::options::OptionKeys::optE::inv_kT_natrot ( "optE:inv_kT_natrot"  )
RealOptionKey const basic::options::OptionKeys::optE::inv_kT_natstruct ( "optE:inv_kT_natstruct"  )
BooleanOptionKey const basic::options::OptionKeys::optE::limit_bad_scores ( "optE:limit_bad_scores"  )
StringOptionKey const basic::options::OptionKeys::optE::load_from_silent ( "optE:load_from_silent"  )
RealOptionKey const basic::options::OptionKeys::optE::max_rms_from_native ( "optE:max_rms_from_native"  )
RealOptionKey const basic::options::OptionKeys::optE::min_decoy_rms_to_native ( "optE:min_decoy_rms_to_native"  )
BooleanOptionKey const basic::options::OptionKeys::optE::mpi_weight_minimization ( "optE:mpi_weight_minimization"  )
IntegerOptionKey const basic::options::OptionKeys::optE::n_design_cycles ( "optE:n_design_cycles"  )
IntegerOptionKey const basic::options::OptionKeys::optE::n_top_natives_to_optimize ( "optE:n_top_natives_to_optimize"  )
BooleanOptionKey const basic::options::OptionKeys::optE::no_design ( "optE:no_design"  )
BooleanOptionKey const basic::options::OptionKeys::optE::no_design_pdb_output ( "optE:no_design_pdb_output"  )
BooleanOptionKey const basic::options::OptionKeys::optE::no_hb_env_dependence ( "optE:no_hb_env_dependence"  )
BooleanOptionKey const basic::options::OptionKeys::optE::no_hb_env_dependence_DNA ( "optE:no_hb_env_dependence_DNA"  )
StringOptionKey const basic::options::OptionKeys::optE::normalize_decoy_score_spread ( "optE:normalize_decoy_score_spread"  )
IntegerOptionKey const basic::options::OptionKeys::optE::number_of_swarm_cycles ( "optE:number_of_swarm_cycles"  )
IntegerOptionKey const basic::options::OptionKeys::optE::number_of_swarm_particles ( "optE:number_of_swarm_particles"  )
BooleanOptionKey const basic::options::OptionKeys::optE::optE ( "optE"  )
BooleanOptionKey const basic::options::OptionKeys::optE::optE_no_protein_fa_elec ( "optE:optE_no_protein_fa_elec"  )
BooleanOptionKey const basic::options::OptionKeys::optE::optE_soft_rep ( "optE:optE_soft_rep"  )
FileOptionKey const basic::options::OptionKeys::optE::optimize_ddG_bind_correlation ( "optE:optimize_ddG_bind_correlation"  )
FileOptionKey const basic::options::OptionKeys::optE::optimize_ddGmutation ( "optE:optimize_ddGmutation"  )
BooleanOptionKey const basic::options::OptionKeys::optE::optimize_ddGmutation_boltzman_average ( "optE:optimize_ddGmutation_boltzman_average"  )
BooleanOptionKey const basic::options::OptionKeys::optE::optimize_ddGmutation_straight_mean ( "optE:optimize_ddGmutation_straight_mean"  )
FileOptionKey const basic::options::OptionKeys::optE::optimize_decoy_discrimination ( "optE:optimize_decoy_discrimination"  )
FileOptionKey const basic::options::OptionKeys::optE::optimize_dGbinding ( "optE:optimize_dGbinding"  )
FileOptionKey const basic::options::OptionKeys::optE::optimize_ligand_discrimination ( "optE:optimize_ligand_discrimination"  )
FileOptionKey const basic::options::OptionKeys::optE::optimize_ligand_rot ( "optE:optimize_ligand_rot"  )
BooleanOptionKey const basic::options::OptionKeys::optE::optimize_nat_aa ( "optE:optimize_nat_aa"  )
BooleanOptionKey const basic::options::OptionKeys::optE::optimize_nat_rot ( "optE:optimize_nat_rot"  )
BooleanOptionKey const basic::options::OptionKeys::optE::optimize_pssm ( "optE:optimize_pssm"  )
BooleanOptionKey const basic::options::OptionKeys::optE::optimize_starting_free_weights ( "optE:optimize_starting_free_weights"  )
IntegerOptionKey const basic::options::OptionKeys::optE::output_top_n_new_decoys ( "optE:output_top_n_new_decoys"  )
FileOptionKey const basic::options::OptionKeys::optE::parse_tagfile ( "optE:parse_tagfile"  )
BooleanOptionKey const basic::options::OptionKeys::optE::pretend_no_ddG_repulsion ( "optE:pretend_no_ddG_repulsion"  )
BooleanOptionKey const basic::options::OptionKeys::optE::ramp_nativeness ( "optE:ramp_nativeness"  )
RealOptionKey const basic::options::OptionKeys::optE::randomly_perturb_starting_free_weights ( "optE:randomly_perturb_starting_free_weights"  )
BooleanOptionKey const basic::options::OptionKeys::optE::recover_nat_rot ( "optE:recover_nat_rot"  )
BooleanOptionKey const basic::options::OptionKeys::optE::repack_and_minimize_decoys ( "optE:repack_and_minimize_decoys"  )
BooleanOptionKey const basic::options::OptionKeys::optE::repack_and_minimize_input_structures ( "optE:repack_and_minimize_input_structures"  )
BooleanOptionKey const basic::options::OptionKeys::optE::repeat_swarm_optimization_until_fitness_improves ( "optE:repeat_swarm_optimization_until_fitness_improves"  )
BooleanOptionKey const basic::options::OptionKeys::optE::sqrt_pssm ( "optE:sqrt_pssm"  )
FileOptionKey const basic::options::OptionKeys::optE::starting_refEs ( "optE:starting_refEs"  )
StringOptionKey const basic::options::OptionKeys::optE::weights ( "optE:weights"  )
FileOptionKey const basic::options::OptionKeys::optE::wrap_dof_optimization ( "optE:wrap_dof_optimization"  )

Variable Documentation

RealOptionKey const basic::options::OptionKeys::optE::approximate_decoy_entropy("optE:approximate_decoy_entropy")

Referenced by add_rosetta_options_2().

FileOptionKey const basic::options::OptionKeys::optE::component_weights("optE:component_weights")

Referenced by add_rosetta_options_2().

FileOptionKey const basic::options::OptionKeys::optE::constant_logic_taskops_file("optE:constant_logic_taskops_file")

Referenced by add_rosetta_options_2().

FileOptionKey const basic::options::OptionKeys::optE::constrain_weights("optE:constrain_weights")

Referenced by add_rosetta_options_2().

StringOptionKey const basic::options::OptionKeys::optE::data_in("optE:data_in")

Referenced by add_rosetta_options_2().

StringOptionKey const basic::options::OptionKeys::optE::data_out("optE:data_out")

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::optE::design_first("optE:design_first")

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::optE::design_with_minpack("optE:design_with_minpack")

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::optE::dont_use_reference_energies("optE:dont_use_reference_energies")

Referenced by add_rosetta_options_2().

RealOptionKey const basic::options::OptionKeys::optE::exclude_badrep_ddGs("optE:exclude_badrep_ddGs")

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::optE::fit_reference_energies_to_aa_profile_recovery("optE:fit_reference_energies_to_aa_profile_recovery")

Referenced by add_rosetta_options_2().

StringVectorOptionKey const basic::options::OptionKeys::optE::fix("optE:fix")
FileOptionKey const basic::options::OptionKeys::optE::fixed("optE:fixed")
FileOptionKey const basic::options::OptionKeys::optE::free("optE:free")
RealOptionKey const basic::options::OptionKeys::optE::inv_kT_nataa("optE:inv_kT_nataa")

Referenced by add_rosetta_options_2().

RealOptionKey const basic::options::OptionKeys::optE::inv_kT_natrot("optE:inv_kT_natrot")

Referenced by add_rosetta_options_2().

RealOptionKey const basic::options::OptionKeys::optE::inv_kT_natstruct("optE:inv_kT_natstruct")

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::optE::limit_bad_scores("optE:limit_bad_scores")

Referenced by add_rosetta_options_2().

StringOptionKey const basic::options::OptionKeys::optE::load_from_silent("optE:load_from_silent")

Referenced by add_rosetta_options_2().

RealOptionKey const basic::options::OptionKeys::optE::max_rms_from_native("optE:max_rms_from_native")

Referenced by add_rosetta_options_2().

RealOptionKey const basic::options::OptionKeys::optE::min_decoy_rms_to_native("optE:min_decoy_rms_to_native")

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::optE::mpi_weight_minimization("optE:mpi_weight_minimization")

Referenced by add_rosetta_options_2().

IntegerOptionKey const basic::options::OptionKeys::optE::n_design_cycles("optE:n_design_cycles")

Referenced by add_rosetta_options_2().

IntegerOptionKey const basic::options::OptionKeys::optE::n_top_natives_to_optimize("optE:n_top_natives_to_optimize")

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::optE::no_design("optE:no_design")
BooleanOptionKey const basic::options::OptionKeys::optE::no_design_pdb_output("optE:no_design_pdb_output")

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::optE::no_hb_env_dependence("optE:no_hb_env_dependence")

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::optE::no_hb_env_dependence_DNA("optE:no_hb_env_dependence_DNA")

Referenced by add_rosetta_options_2().

StringOptionKey const basic::options::OptionKeys::optE::normalize_decoy_score_spread("optE:normalize_decoy_score_spread")

Referenced by add_rosetta_options_2().

IntegerOptionKey const basic::options::OptionKeys::optE::number_of_swarm_cycles("optE:number_of_swarm_cycles")

Referenced by add_rosetta_options_2().

IntegerOptionKey const basic::options::OptionKeys::optE::number_of_swarm_particles("optE:number_of_swarm_particles")

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::optE::optE("optE")

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::optE::optE_no_protein_fa_elec("optE:optE_no_protein_fa_elec")

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::optE::optE_soft_rep("optE:optE_soft_rep")

Referenced by add_rosetta_options_2().

FileOptionKey const basic::options::OptionKeys::optE::optimize_ddG_bind_correlation("optE:optimize_ddG_bind_correlation")

Referenced by add_rosetta_options_2().

FileOptionKey const basic::options::OptionKeys::optE::optimize_ddGmutation("optE:optimize_ddGmutation")

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::optE::optimize_ddGmutation_boltzman_average("optE:optimize_ddGmutation_boltzman_average")

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::optE::optimize_ddGmutation_straight_mean("optE:optimize_ddGmutation_straight_mean")

Referenced by add_rosetta_options_2().

FileOptionKey const basic::options::OptionKeys::optE::optimize_decoy_discrimination("optE:optimize_decoy_discrimination")

Referenced by add_rosetta_options_2().

FileOptionKey const basic::options::OptionKeys::optE::optimize_dGbinding("optE:optimize_dGbinding")

Referenced by add_rosetta_options_2().

FileOptionKey const basic::options::OptionKeys::optE::optimize_ligand_discrimination("optE:optimize_ligand_discrimination")

Referenced by add_rosetta_options_2().

FileOptionKey const basic::options::OptionKeys::optE::optimize_ligand_rot("optE:optimize_ligand_rot")

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::optE::optimize_nat_aa("optE:optimize_nat_aa")

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::optE::optimize_nat_rot("optE:optimize_nat_rot")

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::optE::optimize_pssm("optE:optimize_pssm")

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::optE::optimize_starting_free_weights("optE:optimize_starting_free_weights")

Referenced by add_rosetta_options_2().

IntegerOptionKey const basic::options::OptionKeys::optE::output_top_n_new_decoys("optE:output_top_n_new_decoys")

Referenced by add_rosetta_options_2().

FileOptionKey const basic::options::OptionKeys::optE::parse_tagfile("optE:parse_tagfile")

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::optE::pretend_no_ddG_repulsion("optE:pretend_no_ddG_repulsion")

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::optE::ramp_nativeness("optE:ramp_nativeness")

Referenced by add_rosetta_options_2().

RealOptionKey const basic::options::OptionKeys::optE::randomly_perturb_starting_free_weights("optE:randomly_perturb_starting_free_weights")

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::optE::recover_nat_rot("optE:recover_nat_rot")

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::optE::repack_and_minimize_decoys("optE:repack_and_minimize_decoys")

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::optE::repack_and_minimize_input_structures("optE:repack_and_minimize_input_structures")

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::optE::repeat_swarm_optimization_until_fitness_improves("optE:repeat_swarm_optimization_until_fitness_improves")

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::optE::sqrt_pssm("optE:sqrt_pssm")

Referenced by add_rosetta_options_2().

FileOptionKey const basic::options::OptionKeys::optE::starting_refEs("optE:starting_refEs")

Referenced by add_rosetta_options_2().

StringOptionKey const basic::options::OptionKeys::optE::weights("optE:weights")

Referenced by add_rosetta_options_2().

FileOptionKey const basic::options::OptionKeys::optE::wrap_dof_optimization("optE:wrap_dof_optimization")

Referenced by add_rosetta_options_2().