Rosetta Utilities  2014.35
Namespaces | Functions | Variables
basic::options::OptionKeys::dna::design Namespace Reference

Namespaces

 reversion
 
 specificity
 

Functions

BooleanOptionKey const design ("dna:design")
 
BooleanOptionKey const output_unbound_pdb ("dna:design:output_unbound_pdb")
 
RealOptionKey const z_cutoff ("dna:design:z_cutoff")
 
StringOptionKey const protein_scan ("dna:design:protein_scan")
 
StringOptionKey const checkpoint ("dna:design:checkpoint")
 
BooleanOptionKey const minimize ("dna:design:minimize")
 
StringVectorOptionKey const dna_defs ("dna:design:dna_defs")
 
StringOptionKey const dna_defs_file ("dna:design:dna_defs_file")
 
BooleanOptionKey const nopdb ("dna:design:nopdb")
 
BooleanOptionKey const designable_second_shell ("dna:design:designable_second_shell")
 
BooleanOptionKey const base_contacts_only ("dna:design:base_contacts_only")
 
IntegerOptionKey const probe_specificity ("dna:design:probe_specificity")
 
BooleanOptionKey const reversion_scan ("dna:design:reversion_scan")
 
BooleanOptionKey const binding ("dna:design:binding")
 
RealOptionKey const Boltz_temp ("dna:design:Boltz_temp")
 
BooleanOptionKey const repack_only ("dna:design:repack_only")
 
BooleanOptionKey const sparse_pdb_output ("dna:design:sparse_pdb_output")
 

Variables

BooleanOptionKey const design
 
BooleanOptionKey const output_unbound_pdb
 
RealOptionKey const z_cutoff
 
StringOptionKey const protein_scan
 
StringOptionKey const checkpoint
 
BooleanOptionKey const minimize
 
StringVectorOptionKey const dna_defs
 
StringOptionKey const dna_defs_file
 
BooleanOptionKey const nopdb
 
BooleanOptionKey const designable_second_shell
 
BooleanOptionKey const base_contacts_only
 
IntegerOptionKey const probe_specificity
 
BooleanOptionKey const reversion_scan
 
BooleanOptionKey const binding
 
RealOptionKey const Boltz_temp
 
BooleanOptionKey const repack_only
 
BooleanOptionKey const sparse_pdb_output
 

Function Documentation

BooleanOptionKey const basic::options::OptionKeys::dna::design::base_contacts_only ( "dna:design:base_contacts_only"  )
BooleanOptionKey const basic::options::OptionKeys::dna::design::binding ( "dna:design:binding"  )
RealOptionKey const basic::options::OptionKeys::dna::design::Boltz_temp ( "dna:design:Boltz_temp"  )
StringOptionKey const basic::options::OptionKeys::dna::design::checkpoint ( "dna:design:checkpoint"  )
BooleanOptionKey const basic::options::OptionKeys::dna::design::design ( "dna:design"  )
BooleanOptionKey const basic::options::OptionKeys::dna::design::designable_second_shell ( "dna:design:designable_second_shell"  )
StringVectorOptionKey const basic::options::OptionKeys::dna::design::dna_defs ( "dna:design:dna_defs"  )
StringOptionKey const basic::options::OptionKeys::dna::design::dna_defs_file ( "dna:design:dna_defs_file"  )
BooleanOptionKey const basic::options::OptionKeys::dna::design::minimize ( "dna:design:minimize"  )
BooleanOptionKey const basic::options::OptionKeys::dna::design::nopdb ( "dna:design:nopdb"  )
BooleanOptionKey const basic::options::OptionKeys::dna::design::output_unbound_pdb ( "dna:design:output_unbound_pdb"  )
IntegerOptionKey const basic::options::OptionKeys::dna::design::probe_specificity ( "dna:design:probe_specificity"  )
StringOptionKey const basic::options::OptionKeys::dna::design::protein_scan ( "dna:design:protein_scan"  )
BooleanOptionKey const basic::options::OptionKeys::dna::design::repack_only ( "dna:design:repack_only"  )
BooleanOptionKey const basic::options::OptionKeys::dna::design::reversion_scan ( "dna:design:reversion_scan"  )
BooleanOptionKey const basic::options::OptionKeys::dna::design::sparse_pdb_output ( "dna:design:sparse_pdb_output"  )
RealOptionKey const basic::options::OptionKeys::dna::design::z_cutoff ( "dna:design:z_cutoff"  )

Variable Documentation

BooleanOptionKey const basic::options::OptionKeys::dna::design::base_contacts_only("dna:design:base_contacts_only")

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::dna::design::binding("dna:design:binding")

Referenced by add_rosetta_options_1().

RealOptionKey const basic::options::OptionKeys::dna::design::Boltz_temp("dna:design:Boltz_temp")

Referenced by add_rosetta_options_1().

StringOptionKey const basic::options::OptionKeys::dna::design::checkpoint("dna:design:checkpoint")

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::dna::design::design("dna:design")

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::dna::design::designable_second_shell("dna:design:designable_second_shell")

Referenced by add_rosetta_options_1().

StringVectorOptionKey const basic::options::OptionKeys::dna::design::dna_defs("dna:design:dna_defs")

Referenced by add_rosetta_options_1().

StringOptionKey const basic::options::OptionKeys::dna::design::dna_defs_file("dna:design:dna_defs_file")

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::dna::design::minimize("dna:design:minimize")

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::dna::design::nopdb("dna:design:nopdb")

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::dna::design::output_unbound_pdb("dna:design:output_unbound_pdb")

Referenced by add_rosetta_options_1().

IntegerOptionKey const basic::options::OptionKeys::dna::design::probe_specificity("dna:design:probe_specificity")

Referenced by add_rosetta_options_1().

StringOptionKey const basic::options::OptionKeys::dna::design::protein_scan("dna:design:protein_scan")

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::dna::design::repack_only("dna:design:repack_only")
BooleanOptionKey const basic::options::OptionKeys::dna::design::reversion_scan("dna:design:reversion_scan")

Referenced by add_rosetta_options_1().

BooleanOptionKey const basic::options::OptionKeys::dna::design::sparse_pdb_output("dna:design:sparse_pdb_output")

Referenced by add_rosetta_options_1().

RealOptionKey const basic::options::OptionKeys::dna::design::z_cutoff("dna:design:z_cutoff")

Referenced by add_rosetta_options_1().