Rosetta Utilities  2014.35
Namespaces | Functions
packing Namespace Reference

Namespaces

 ex1
 
 ex1aro
 
 ex1aro_exposed
 
 ex2
 
 ex2aro
 
 ex2aro_exposed
 
 ex3
 
 ex4
 
 exdna
 

Functions

BooleanOptionKey const packing ("packing")
 
BooleanOptionKey const repack_only ("packing:repack_only")
 
BooleanOptionKey const prevent_repacking ("packing:prevent_repacking")
 
RealOptionKey const cenrot_cutoff ("packing:cenrot_cutoff")
 
BooleanOptionKey const ignore_ligand_chi ("packing:ignore_ligand_chi")
 
IntegerOptionKey const ndruns ("packing:ndruns")
 
BooleanOptionKey const soft_rep_design ("packing:soft_rep_design")
 
BooleanOptionKey const use_electrostatic_repulsion ("packing:use_electrostatic_repulsion")
 
BooleanOptionKey const dump_rotamer_sets ("packing:dump_rotamer_sets")
 
RealOptionKey const dunbrack_prob_buried ("packing:dunbrack_prob_buried")
 
RealOptionKey const dunbrack_prob_nonburied ("packing:dunbrack_prob_nonburied")
 
BooleanOptionKey const no_optH ("packing:no_optH")
 
BooleanOptionKey const optH_MCA ("packing:optH_MCA")
 
BooleanOptionKey const pack_missing_sidechains ("packing:pack_missing_sidechains")
 
BooleanOptionKey const preserve_c_beta ("packing:preserve_c_beta")
 
BooleanOptionKey const flip_HNQ ("packing:flip_HNQ")
 
IntegerVectorOptionKey const fix_his_tautomer ("packing:fix_his_tautomer")
 
BooleanOptionKey const print_pymol_selection ("packing:print_pymol_selection")
 
IntegerOptionKey const extrachi_cutoff ("packing:extrachi_cutoff")
 
FileVectorOptionKey const resfile ("packing:resfile")
 
RealOptionKey const outeriterations_scaling ("packing:outeriterations_scaling")
 
RealOptionKey const inneriterations_scaling ("packing:inneriterations_scaling")
 
StringVectorOptionKey const adducts ("packing:adducts")
 
BooleanOptionKey const use_input_sc ("packing:use_input_sc")
 
FileVectorOptionKey const unboundrot ("packing:unboundrot")
 
RealOptionKey const max_rotbump_energy ("packing:max_rotbump_energy")
 
BooleanOptionKey const lazy_ig ("packing:lazy_ig")
 
BooleanOptionKey const double_lazy_ig ("packing:double_lazy_ig")
 
IntegerOptionKey const linmem_ig ("packing:linmem_ig")
 
IntegerOptionKey const multi_cool_annealer ("packing:multi_cool_annealer")
 
RealVectorOptionKey const minpack_temp_schedule ("packing:minpack_temp_schedule")
 
IntegerOptionKey const minpack_inner_iteration_scale ("packing:minpack_inner_iteration_scale")
 
BooleanOptionKey const minpack_disable_bumpcheck ("packing:minpack_disable_bumpcheck")
 

Function Documentation

StringVectorOptionKey const packing::adducts ( "packing:adducts"  )
RealOptionKey const packing::cenrot_cutoff ( "packing:cenrot_cutoff"  )
BooleanOptionKey const packing::double_lazy_ig ( "packing:double_lazy_ig"  )
BooleanOptionKey const packing::dump_rotamer_sets ( "packing:dump_rotamer_sets"  )
RealOptionKey const packing::dunbrack_prob_buried ( "packing:dunbrack_prob_buried"  )
RealOptionKey const packing::dunbrack_prob_nonburied ( "packing:dunbrack_prob_nonburied"  )
IntegerOptionKey const packing::extrachi_cutoff ( "packing:extrachi_cutoff"  )
IntegerVectorOptionKey const packing::fix_his_tautomer ( "packing:fix_his_tautomer"  )
BooleanOptionKey const packing::flip_HNQ ( "packing:flip_HNQ"  )
BooleanOptionKey const packing::ignore_ligand_chi ( "packing:ignore_ligand_chi"  )
RealOptionKey const packing::inneriterations_scaling ( "packing:inneriterations_scaling"  )
BooleanOptionKey const packing::lazy_ig ( "packing:lazy_ig"  )
IntegerOptionKey const packing::linmem_ig ( "packing:linmem_ig"  )
RealOptionKey const packing::max_rotbump_energy ( "packing:max_rotbump_energy"  )
BooleanOptionKey const packing::minpack_disable_bumpcheck ( "packing:minpack_disable_bumpcheck"  )
IntegerOptionKey const packing::minpack_inner_iteration_scale ( "packing:minpack_inner_iteration_scale"  )
RealVectorOptionKey const packing::minpack_temp_schedule ( "packing:minpack_temp_schedule"  )
IntegerOptionKey const packing::multi_cool_annealer ( "packing:multi_cool_annealer"  )
IntegerOptionKey const packing::ndruns ( "packing:ndruns"  )
BooleanOptionKey const packing::no_optH ( "packing:no_optH"  )
BooleanOptionKey const packing::optH_MCA ( "packing:optH_MCA"  )
RealOptionKey const packing::outeriterations_scaling ( "packing:outeriterations_scaling"  )
BooleanOptionKey const packing::pack_missing_sidechains ( "packing:pack_missing_sidechains"  )
BooleanOptionKey const packing::packing ( "packing"  )
BooleanOptionKey const packing::preserve_c_beta ( "packing:preserve_c_beta"  )
BooleanOptionKey const packing::prevent_repacking ( "packing:prevent_repacking"  )
BooleanOptionKey const packing::print_pymol_selection ( "packing:print_pymol_selection"  )
BooleanOptionKey const packing::repack_only ( "packing:repack_only"  )
FileVectorOptionKey const packing::resfile ( "packing:resfile"  )
BooleanOptionKey const packing::soft_rep_design ( "packing:soft_rep_design"  )
FileVectorOptionKey const packing::unboundrot ( "packing:unboundrot"  )
BooleanOptionKey const packing::use_electrostatic_repulsion ( "packing:use_electrostatic_repulsion"  )
BooleanOptionKey const packing::use_input_sc ( "packing:use_input_sc"  )