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Rosetta Utilities
2014.35
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BooleanOptionKey const | out ("out") |
BooleanOptionKey const | overwrite ("out:overwrite") |
IntegerOptionKey const | nstruct ("out:nstruct") |
IntegerOptionKey const | shuffle_nstruct ("out:shuffle_nstruct") |
StringOptionKey const | prefix ("out:prefix") |
StringOptionKey const | suffix ("out:suffix") |
BooleanOptionKey const | no_nstruct_label ("out:no_nstruct_label") |
BooleanOptionKey const | pdb_gz ("out:pdb_gz") |
BooleanOptionKey const | pdb ("out:pdb") |
BooleanOptionKey const | silent_gz ("out:silent_gz") |
BooleanOptionKey const | membrane_pdb ("out:membrane_pdb") |
RealOptionKey const | membrane_pdb_thickness ("out:membrane_pdb_thickness") |
BooleanOptionKey const | use_database ("out:use_database") |
IntegerOptionKey const | database_protocol_id ("out:database_protocol_id") |
StringVectorOptionKey const | database_filter ("out:database_filter") |
IntegerVectorOptionKey const | resume_batch ("out:resume_batch") |
BooleanOptionKey const | nooutput ("out:nooutput") |
BooleanOptionKey const | output ("out:output") |
RealOptionKey const | scorecut ("out:scorecut") |
BooleanOptionKey const | show_accessed_options ("out:show_accessed_options") |
BooleanOptionKey const | show_unused_options ("out:show_unused_options") |
FileOptionKey const | sf ("out:sf") |
StringVectorOptionKey const | mute ("out:mute") |
StringVectorOptionKey const | unmute ("out:unmute") |
IntegerOptionKey const | level ("out:level") |
StringVectorOptionKey const | levels ("out:levels") |
IntegerOptionKey const | std_IO_exit_error_code ("out:std_IO_exit_error_code") |
BooleanOptionKey const | chname ("out:chname") |
BooleanOptionKey const | chtimestamp ("out:chtimestamp") |
BooleanOptionKey const | dry_run ("out:dry_run") |
StringOptionKey const | mpi_tracer_to_file ("out:mpi_tracer_to_file") |
StringOptionKey const | user_tag ("out:user_tag") |
StringOptionKey const | output_tag ("out:output_tag") |
BooleanOptionKey const basic::options::OptionKeys::out::chname |
Referenced by add_rosetta_options_0().
BooleanOptionKey const basic::options::OptionKeys::out::chtimestamp |
Referenced by add_rosetta_options_0().
StringVectorOptionKey const basic::options::OptionKeys::out::database_filter |
Referenced by add_rosetta_options_0().
IntegerOptionKey const basic::options::OptionKeys::out::database_protocol_id |
Referenced by add_rosetta_options_0().
BooleanOptionKey const basic::options::OptionKeys::out::dry_run |
Referenced by add_rosetta_options_0().
IntegerOptionKey const basic::options::OptionKeys::out::level |
StringVectorOptionKey const basic::options::OptionKeys::out::levels |
Referenced by add_rosetta_options_0().
BooleanOptionKey const basic::options::OptionKeys::out::membrane_pdb |
Referenced by add_rosetta_options_0().
RealOptionKey const basic::options::OptionKeys::out::membrane_pdb_thickness |
Referenced by add_rosetta_options_0().
StringOptionKey const basic::options::OptionKeys::out::mpi_tracer_to_file |
Referenced by add_rosetta_options_0().
StringVectorOptionKey const basic::options::OptionKeys::out::mute |
Referenced by add_rosetta_options_0(), and basic::Tracer::super_mute_().
BooleanOptionKey const basic::options::OptionKeys::out::no_nstruct_label |
Referenced by add_rosetta_options_0().
BooleanOptionKey const basic::options::OptionKeys::out::nooutput |
Referenced by add_rosetta_options_0().
IntegerOptionKey const basic::options::OptionKeys::out::nstruct |
Referenced by add_rosetta_options_0().
BooleanOptionKey const basic::options::OptionKeys::out::out |
Referenced by add_rosetta_options_0(), add_rosetta_options_1(), numeric::average_link_clustering(), basic::ComparingTracer::ComparingTracer(), numeric::complete_link_clustering(), utility::file::create_blank_file(), utility::file::gunzip(), utility::io::izstream::open(), utility::io::ozstream::open(), utility::io::ozstream::open_append(), numeric::kinematic_closure::operator<<(), basic::resource_manager::operator<<(), numeric::kdtree::operator<<(), numeric::operator<<(), basic::sampling::orientations::operator<<(), utility::tag::operator<<(), basic::sampling::SphereSampler::pdb_from_level(), utility::tag::Tag::setOption(), basic::resource_manager::locator::FileSystemResourceLocator::show(), numeric::single_link_clustering(), basic::TracerToFile::TracerToFile(), and utility::io::write_vector().
BooleanOptionKey const basic::options::OptionKeys::out::output |
Referenced by add_rosetta_options_0().
StringOptionKey const basic::options::OptionKeys::out::output_tag |
Referenced by add_rosetta_options_0().
BooleanOptionKey const basic::options::OptionKeys::out::overwrite |
Referenced by add_rosetta_options_0().
BooleanOptionKey const basic::options::OptionKeys::out::pdb |
Referenced by add_rosetta_options_0().
BooleanOptionKey const basic::options::OptionKeys::out::pdb_gz |
Referenced by add_rosetta_options_0().
StringOptionKey const basic::options::OptionKeys::out::prefix |
Referenced by add_rosetta_options_0().
IntegerVectorOptionKey const basic::options::OptionKeys::out::resume_batch |
Referenced by add_rosetta_options_0().
RealOptionKey const basic::options::OptionKeys::out::scorecut |
Referenced by add_rosetta_options_0().
FileOptionKey const basic::options::OptionKeys::out::sf |
Referenced by add_rosetta_options_0().
BooleanOptionKey const basic::options::OptionKeys::out::show_accessed_options |
Referenced by add_rosetta_options_0().
BooleanOptionKey const basic::options::OptionKeys::out::show_unused_options |
Referenced by add_rosetta_options_0().
IntegerOptionKey const basic::options::OptionKeys::out::shuffle_nstruct |
Referenced by add_rosetta_options_0().
BooleanOptionKey const basic::options::OptionKeys::out::silent_gz |
Referenced by add_rosetta_options_0().
IntegerOptionKey const basic::options::OptionKeys::out::std_IO_exit_error_code |
Referenced by add_rosetta_options_0().
StringOptionKey const basic::options::OptionKeys::out::suffix |
Referenced by add_rosetta_options_0(), and numeric::kinematic_closure::operator<<().
StringVectorOptionKey const basic::options::OptionKeys::out::unmute |
Referenced by add_rosetta_options_0().
BooleanOptionKey const basic::options::OptionKeys::out::use_database |
Referenced by add_rosetta_options_0().
StringOptionKey const basic::options::OptionKeys::out::user_tag |
Referenced by add_rosetta_options_0().