Rosetta Utilities  2014.35
Variables
basic::options::OptionKeys::stepwise::protein Namespace Reference

Variables

BooleanOptionKey const protein ("stepwise:protein")
 
BooleanOptionKey const global_optimize ("stepwise:protein:global_optimize")
 
BooleanOptionKey const disable_sampling_of_loop_takeoff ("stepwise:protein:disable_sampling_of_loop_takeoff")
 
BooleanOptionKey const sample_beta ("stepwise:protein:sample_beta")
 
BooleanOptionKey const ghost_loops ("stepwise:protein:ghost_loops")
 
StringOptionKey const min_type ("stepwise:protein:min_type")
 
RealOptionKey const min_tolerance ("stepwise:protein:min_tolerance")
 
BooleanOptionKey const centroid_screen ("stepwise:protein:centroid_screen")
 
RealOptionKey const centroid_score_diff_cut ("stepwise:protein:centroid_score_diff_cut")
 
StringOptionKey const centroid_weights ("stepwise:protein:centroid_weights")
 
RealOptionKey const score_diff_cut ("stepwise:protein:score_diff_cut")
 
BooleanOptionKey const filter_native_big_bins ("stepwise:protein:filter_native_big_bins")
 
BooleanOptionKey const cluster_by_all_atom_rmsd ("stepwise:protein:cluster_by_all_atom_rmsd")
 
BooleanOptionKey const centroid_output ("stepwise:protein:centroid_output")
 
IntegerOptionKey const n_sample ("stepwise:protein:n_sample")
 
IntegerOptionKey const nstruct_centroid ("stepwise:protein:nstruct_centroid")
 
BooleanOptionKey const ccd_close ("stepwise:protein:ccd_close")
 
IntegerVectorOptionKey const bridge_res ("stepwise:protein:bridge_res")
 
BooleanOptionKey const cart_min ("stepwise:protein:cart_min")
 
BooleanOptionKey const move_jumps_between_chains ("stepwise:protein:move_jumps_between_chains")
 
BooleanOptionKey const use_packer_instead_of_rotamer_trials ("stepwise:protein:use_packer_instead_of_rotamer_trials")
 
BooleanOptionKey const expand_loop_takeoff ("stepwise:protein:expand_loop_takeoff")
 
BooleanOptionKey const skip_coord_constraints ("stepwise:protein:skip_coord_constraints")
 
BooleanOptionKey const allow_virtual_side_chains ("stepwise:protein:allow_virtual_side_chains")
 
BooleanOptionKey const protein_prepack ("stepwise:protein:protein_prepack")
 

Variable Documentation

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::allow_virtual_side_chains

Referenced by add_rosetta_options_3().

IntegerVectorOptionKey const basic::options::OptionKeys::stepwise::protein::bridge_res

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::cart_min

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::ccd_close

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::centroid_output

Referenced by add_rosetta_options_3().

RealOptionKey const basic::options::OptionKeys::stepwise::protein::centroid_score_diff_cut

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::centroid_screen

Referenced by add_rosetta_options_3().

StringOptionKey const basic::options::OptionKeys::stepwise::protein::centroid_weights

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::cluster_by_all_atom_rmsd

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::disable_sampling_of_loop_takeoff

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::expand_loop_takeoff

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::filter_native_big_bins

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::ghost_loops

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::global_optimize

Referenced by add_rosetta_options_3().

RealOptionKey const basic::options::OptionKeys::stepwise::protein::min_tolerance

Referenced by add_rosetta_options_3().

StringOptionKey const basic::options::OptionKeys::stepwise::protein::min_type
BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::move_jumps_between_chains

Referenced by add_rosetta_options_3().

IntegerOptionKey const basic::options::OptionKeys::stepwise::protein::n_sample

Referenced by add_rosetta_options_3().

IntegerOptionKey const basic::options::OptionKeys::stepwise::protein::nstruct_centroid

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::protein

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::protein_prepack

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::sample_beta

Referenced by add_rosetta_options_3().

RealOptionKey const basic::options::OptionKeys::stepwise::protein::score_diff_cut
BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::skip_coord_constraints

Referenced by add_rosetta_options_3().

BooleanOptionKey const basic::options::OptionKeys::stepwise::protein::use_packer_instead_of_rotamer_trials

Referenced by add_rosetta_options_3().