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Namespaces | Functions
templates Namespace Reference

Namespaces

 cst
 
 fragsteal
 

Functions

BooleanOptionKey const templates ("templates")
 
FileOptionKey const config ("templates:config")
 
BooleanOptionKey const fix_aligned_residues ("templates:fix_aligned_residues")
 
FileOptionKey const fix_frag_file ("templates:fix_frag_file")
 
IntegerOptionKey const fix_margin ("templates:fix_margin")
 
IntegerOptionKey const min_nr_large_frags ("templates:min_nr_large_frags")
 
IntegerOptionKey const min_nr_small_frags ("templates:min_nr_small_frags")
 
BooleanOptionKey const no_pick_fragments ("templates:no_pick_fragments")
 
IntegerOptionKey const nr_large_copies ("templates:nr_large_copies")
 
IntegerOptionKey const nr_small_copies ("templates:nr_small_copies")
 
BooleanOptionKey const pairings ("templates:pairings")
 
BooleanOptionKey const pick_multiple_sizes ("templates:pick_multiple_sizes")
 
BooleanOptionKey const strand_constraint ("templates:strand_constraint")
 
BooleanOptionKey const vary_frag_size ("templates:vary_frag_size")
 
BooleanOptionKey const no_culling ("templates:no_culling")
 
FileOptionKey const helix_pairings ("templates:helix_pairings")
 
FileOptionKey const prefix ("templates:prefix")
 
IntegerOptionKey const change_movemap ("templates:change_movemap")
 
BooleanOptionKey const force_native_topology ("templates:force_native_topology")
 
RealOptionKey const topology_rank_cutoff ("templates:topology_rank_cutoff")
 
IntegerOptionKey const min_frag_size ("templates:min_frag_size")
 
IntegerOptionKey const max_shrink ("templates:max_shrink")
 
IntegerOptionKey const shrink_step ("templates:shrink_step")
 
IntegerOptionKey const shrink_pos_step ("templates:shrink_pos_step")
 
IntegerOptionKey const min_padding ("templates:min_padding")
 
IntegerOptionKey const min_align_pos ("templates:min_align_pos")
 
IntegerOptionKey const max_align_pos ("templates:max_align_pos")
 

Function Documentation

IntegerOptionKey const templates::change_movemap ( "templates:change_movemap"  )
FileOptionKey const templates::config ( "templates:config"  )
BooleanOptionKey const templates::fix_aligned_residues ( "templates:fix_aligned_residues"  )
FileOptionKey const templates::fix_frag_file ( "templates:fix_frag_file"  )
IntegerOptionKey const templates::fix_margin ( "templates:fix_margin"  )
BooleanOptionKey const templates::force_native_topology ( "templates:force_native_topology"  )
FileOptionKey const templates::helix_pairings ( "templates:helix_pairings"  )
IntegerOptionKey const templates::max_align_pos ( "templates:max_align_pos"  )
IntegerOptionKey const templates::max_shrink ( "templates:max_shrink"  )
IntegerOptionKey const templates::min_align_pos ( "templates:min_align_pos"  )
IntegerOptionKey const templates::min_frag_size ( "templates:min_frag_size"  )
IntegerOptionKey const templates::min_nr_large_frags ( "templates:min_nr_large_frags"  )
IntegerOptionKey const templates::min_nr_small_frags ( "templates:min_nr_small_frags"  )
IntegerOptionKey const templates::min_padding ( "templates:min_padding"  )
BooleanOptionKey const templates::no_culling ( "templates:no_culling"  )
BooleanOptionKey const templates::no_pick_fragments ( "templates:no_pick_fragments"  )
IntegerOptionKey const templates::nr_large_copies ( "templates:nr_large_copies"  )
IntegerOptionKey const templates::nr_small_copies ( "templates:nr_small_copies"  )
BooleanOptionKey const templates::pairings ( "templates:pairings"  )
BooleanOptionKey const templates::pick_multiple_sizes ( "templates:pick_multiple_sizes"  )
FileOptionKey const templates::prefix ( "templates:prefix"  )
IntegerOptionKey const templates::shrink_pos_step ( "templates:shrink_pos_step"  )
IntegerOptionKey const templates::shrink_step ( "templates:shrink_step"  )
BooleanOptionKey const templates::strand_constraint ( "templates:strand_constraint"  )
BooleanOptionKey const templates::templates ( "templates"  )
RealOptionKey const templates::topology_rank_cutoff ( "templates:topology_rank_cutoff"  )
BooleanOptionKey const templates::vary_frag_size ( "templates:vary_frag_size"  )