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Rosetta
2020.50
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StringOptionKey const basic::options::OptionKeys::tcrmodel::ab_template_db_path |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::alpha_cdr1_template_id |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::alpha_cdr1_template_pdb |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::alpha_cdr2_template_id |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::alpha_cdr2_template_pdb |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::alpha_cdr3_template_id |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::alpha_cdr3_template_pdb |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::alpha_framework_template_id |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::alpha_framework_template_pdb |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::alpha_germline_template_id |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::alpha_germline_template_pdb |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::alpha_orientation_template_id |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::alpha_orientation_template_pdb |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::anarci_path |
Referenced by add_rosetta_options_15().
BooleanOptionKey const basic::options::OptionKeys::tcrmodel::assign_cdr |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::assign_cdr1a |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::assign_cdr1b |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::assign_cdr2a |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::assign_cdr2b |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::assign_cdr3a |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::assign_cdr3b |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::beta_cdr1_template_id |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::beta_cdr1_template_pdb |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::beta_cdr2_template_id |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::beta_cdr2_template_pdb |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::beta_cdr3_template_id |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::beta_cdr3_template_pdb |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::beta_framework_template_id |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::beta_framework_template_pdb |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::beta_germline_template_id |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::beta_germline_template_pdb |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::beta_orientation_template_id |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::beta_orientation_template_pdb |
Referenced by add_rosetta_options_15().
RealOptionKey const basic::options::OptionKeys::tcrmodel::blastp_identity_cutoff |
Referenced by add_rosetta_options_15().
BooleanOptionKey const basic::options::OptionKeys::tcrmodel::dump_templates |
Referenced by add_rosetta_options_15().
FileOptionKey const basic::options::OptionKeys::tcrmodel::ignore_list |
Referenced by add_rosetta_options_15().
BooleanOptionKey const basic::options::OptionKeys::tcrmodel::include_ab_templates |
Referenced by add_rosetta_options_15().
BooleanOptionKey const basic::options::OptionKeys::tcrmodel::minimize_model |
Referenced by add_rosetta_options_15().
BooleanOptionKey const basic::options::OptionKeys::tcrmodel::refine_all_tcr_cdr_loops |
Referenced by add_rosetta_options_15().
BooleanOptionKey const basic::options::OptionKeys::tcrmodel::refine_tcr_cdr3_loops |
Referenced by add_rosetta_options_15().
BooleanOptionKey const basic::options::OptionKeys::tcrmodel::refine_tcr_cdr3a_loop |
Referenced by add_rosetta_options_15().
BooleanOptionKey const basic::options::OptionKeys::tcrmodel::refine_tcr_cdr3b_loop |
Referenced by add_rosetta_options_15().
BooleanOptionKey const basic::options::OptionKeys::tcrmodel::relax_model |
Referenced by add_rosetta_options_15().
BooleanOptionKey const basic::options::OptionKeys::tcrmodel::remodel_loop_cdr3a |
Referenced by add_rosetta_options_15().
BooleanOptionKey const basic::options::OptionKeys::tcrmodel::remodel_loop_cdr3b |
Referenced by add_rosetta_options_15().
BooleanOptionKey const basic::options::OptionKeys::tcrmodel::remodel_tcr_cdr3_loops |
Referenced by add_rosetta_options_15().
BooleanOptionKey const basic::options::OptionKeys::tcrmodel::remodel_tcr_cdr3a_loop |
Referenced by add_rosetta_options_15().
BooleanOptionKey const basic::options::OptionKeys::tcrmodel::remodel_tcr_cdr3b_loop |
Referenced by add_rosetta_options_15().
BooleanOptionKey const basic::options::OptionKeys::tcrmodel::skip_modeling |
Referenced by add_rosetta_options_15().
StringOptionKey const basic::options::OptionKeys::tcrmodel::tcr_template_db_path |
Referenced by add_rosetta_options_15().
BooleanOptionKey const basic::options::OptionKeys::tcrmodel::tcrmodel |
Referenced by add_rosetta_options_15().
RealOptionKey const basic::options::OptionKeys::tcrmodel::template_identity_cutoff |
Referenced by add_rosetta_options_15().
BooleanOptionKey const basic::options::OptionKeys::tcrmodel::use_alpha_germline_templates |
Referenced by add_rosetta_options_15().
BooleanOptionKey const basic::options::OptionKeys::tcrmodel::use_beta_germline_templates |
Referenced by add_rosetta_options_15().
BooleanOptionKey const basic::options::OptionKeys::tcrmodel::use_user_templates |
Referenced by add_rosetta_options_15().