Rosetta  2020.37
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Friends Macros Pages
Functions
analyze_base_pairing.cc File Reference

Analyze base pairing patterns in a silent file. More...

#include <core/types.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/io/silent/BinarySilentStruct.hh>
#include <core/io/silent/SilentFileData.hh>
#include <core/io/silent/SilentFileOptions.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/rms_util.hh>
#include <core/scoring/rna/RNA_ScoringInfo.hh>
#include <core/energy_methods/RNA_ChemicalMappingEnergy.hh>
#include <core/pose/rna/RNA_DataInfo.hh>
#include <core/pose/rna/util.hh>
#include <basic/options/option.hh>
#include <basic/options/option_macros.hh>
#include <basic/database/open.hh>
#include <protocols/viewer/viewers.hh>
#include <core/pose/Pose.hh>
#include <core/pose/full_model_info/FullModelInfo.hh>
#include <core/pose/datacache/CacheableDataType.hh>
#include <basic/datacache/BasicDataCache.hh>
#include <core/pose/extra_pose_info_util.hh>
#include <devel/init.hh>
#include <core/import_pose/import_pose.hh>
#include <core/import_pose/pose_stream/PoseInputStream.hh>
#include <core/import_pose/pose_stream/PoseInputStream.fwd.hh>
#include <core/import_pose/pose_stream/PDBPoseInputStream.hh>
#include <core/import_pose/pose_stream/SilentFilePoseInputStream.hh>
#include <utility/vector1.hh>
#include <ObjexxFCL/string.functions.hh>
#include <protocols/stepwise/modeler/util.hh>
#include <protocols/stepwise/modeler/rna/util.hh>
#include <protocols/stepwise/modeler/align/util.hh>
#include <core/io/rna/RNA_DataReader.hh>
#include <core/pose/PDBInfo.hh>
#include <protocols/recces/sampler/rna/MC_RNA_Suite.hh>
#include <protocols/recces/sampler/rna/MC_RNA_MultiSuite.hh>
#include <protocols/moves/SimulatedTempering.hh>
#include <protocols/moves/MonteCarlo.hh>
#include <protocols/recces/sampler/rna/MC_RNA_KIC_Sampler.hh>
#include <protocols/stepwise/sampler/rna/RNA_KIC_Sampler.hh>
#include <core/id/TorsionID.hh>
#include <protocols/recces/sampler/MC_OneTorsion.hh>
#include <utility/io/ozstream.hh>
#include <iostream>
#include <string>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/chemical.OptionKeys.gen.hh>
#include <basic/options/keys/full_model.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/keys/rna.OptionKeys.gen.hh>
#include <basic/options/keys/score.OptionKeys.gen.hh>
#include <basic/options/keys/stepwise.OptionKeys.gen.hh>
#include <utility/excn/Exceptions.hh>

Functions

void analyze_base_pair_test ()
 
void * my_main (void *)
 
int main (int argc, char *argv[])
 

Detailed Description

Analyze base pairing patterns in a silent file.

Function Documentation

void analyze_base_pair_test ( )
int main ( int  argc,
char *  argv[] 
)
void* my_main ( void *  )