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Variables
basic::options::OptionKeys::cutoutdomain Namespace Reference

Variables

BooleanOptionKey const cutoutdomain
 
IntegerOptionKey const start
 
IntegerOptionKey const end
 

Variable Documentation

BooleanOptionKey const basic::options::OptionKeys::cutoutdomain::cutoutdomain

Referenced by add_rosetta_options_6().

IntegerOptionKey const basic::options::OptionKeys::cutoutdomain::end

Referenced by utility::json_spirit::add_esc_chars(), apps::public1::scenarios::chemically_conjugated_docking::add_extra_bodies(), add_rosetta_options_6(), utility::vectorL< L, bool, A >::append(), utility::vectorL< 1, std::string, A >::append(), base_name(), calc_scores(), utility::options::OptionCollection::check_specs(), utility::options::OptionCollection::check_values(), utility::vectorL< 1, std::string, A >::contains(), delete_protein_from_pose(), delete_RNA_from_pose(), numeric::interpolation::spline::CubicSpline::dF(), extract_pdbs_test(), numeric::interpolation::spline::CubicSpline::F(), utility::file::file_size(), basic::sampling::orientations::QuaternionGridManager::fill_metadata(), fmt::internal::ArgMap< Char >::find(), utility::graph::Node::find_edge(), utility::graph::DirectedNode::find_edge_from(), utility::graph::DirectedNode::find_edge_to(), utility::options::OptionCollection::find_key_cl(), fmt::format_arg(), utility::json_spirit::get_str(), numeric::VoxelGrid< typename >::GetNeighborsMultiDimensional(), harvest_scores(), utility::vector1< numeric::urs_Quat >::has_value(), utility::vectorL< L, bool, A >::has_value(), numeric::VoxelGrid< typename >::HasNeighborsMultiDimensional(), utility::vector1< bool, A >::index(), utility::vector1< numeric::urs_Quat >::index(), utility::vectorL< 1, std::string, A >::index_of(), UBQ_GTPase_disulfide_Mover::init_on_new_input(), UBQ_E2Mover::init_on_new_input(), numeric::geometry::hashing::SixDOffsetTree::insert(), numeric::IntervalSet< double >::IntervalSet(), binder::Config::is_function_binding_requested(), binder::Config::is_function_skipping_requested(), main(), measure_sequence_recovery(), numeric::kinematic_closure::modp(), utility::json_spirit::Semantic_actions< Value_type, Iter_type >::new_false(), utility::json_spirit::Semantic_actions< Value_type, Iter_type >::new_name(), utility::json_spirit::Semantic_actions< Value_type, Iter_type >::new_null(), utility::json_spirit::Semantic_actions< Value_type, Iter_type >::new_true(), utility::options::operator<<(), apps::public1::scenarios::chemically_conjugated_docking::pack_extra_bodies(), utility::vectorL< 1, std::string, A >::pop(), fmt::BasicWriter< Char >::prepare_int_buffer(), numeric::IntervalSet< double >::push_back(), utility::tag::Tag::read(), utility::replace_environment_variables(), numeric::random::reservoir_sample(), utility::graph::RingSizeVisitor< Graph, DistanceMap, LabelMap >::RingSizeVisitor(), ResidueTypeBenchmark::run(), ScoreFragmentSetMover::run(), FragmentAssemblyMover::run(), ConsensusFragmentMover::run(), SolutionRescoreMover::run(), run_pep_prep(), sequence_tolerance_main(), numeric::IntervalSet< double >::set(), PDB_IOBenchmark::setUp(), utility::options::OptionCollection::show_all(), utility::options::OptionCollection::show_all_hier(), utility::options::OptionCollection::show_help(), utility::options::OptionCollection::show_help_hier(), utility::options::OptionCollection::show_inaccessed_user_options(), utility::options::OptionCollection::show_table_text(), utility::options::OptionCollection::show_table_Wiki(), utility::options::OptionCollection::show_user(), store_energies(), utility::strip(), svm_binary_svc_probability(), svm_cross_validation(), basic::database::schema_generator::Schema::table_schema_statements(), and numeric::kdtree::KDPoint::to_string().

IntegerOptionKey const basic::options::OptionKeys::cutoutdomain::start