Rosetta  2020.37
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Variables
basic::options::OptionKeys::dna::specificity Namespace Reference

Variables

BooleanOptionKey const specificity
 
BooleanOptionKey const exclude_dna_dna
 
RealVectorOptionKey const params
 
FileVectorOptionKey const frag_files
 
BooleanOptionKey const only_repack
 
BooleanOptionKey const design_DNA
 
BooleanOptionKey const soft_rep
 
BooleanOptionKey const dump_pdbs
 
BooleanOptionKey const fast
 
BooleanOptionKey const randomize_motif
 
RealOptionKey const Wfa_elec
 
RealOptionKey const Wdna_bs
 
RealOptionKey const Wdna_bp
 
RealOptionKey const minimize_tolerance
 
StringOptionKey const weights_tag
 
StringOptionKey const weights_tag_list
 
StringOptionKey const min_type
 
StringOptionKey const mode
 
StringOptionKey const score_function
 
BooleanOptionKey const pre_minimize
 
BooleanOptionKey const post_minimize
 
BooleanOptionKey const pre_pack
 
IntegerOptionKey const nloop
 
IntegerOptionKey const n_inner
 
IntegerOptionKey const n_outer
 
IntegerOptionKey const nstep_water
 
IntegerOptionKey const moving_jump
 
IntegerOptionKey const motif_begin
 
IntegerOptionKey const motif_size
 
StringVectorOptionKey const pdb_pos
 
StringVectorOptionKey const methylate
 
RealVectorOptionKey const dna_backbone_torsion_sdevs
 
RealOptionKey const dna_sugar_torsion_sdev
 
RealOptionKey const dna_chi_torsion_sdev
 
StringOptionKey const lk_ball_wtd_tag
 
BooleanOptionKey const lk_ball_for_bb
 
RealOptionKey const lk_ball_ramp_width_A2
 
RealOptionKey const lk_ball_overlap_gap
 
RealOptionKey const lk_ball_overlap_width_A2
 
RealOptionKey const lk_ball_water_fade
 
RealVectorOptionKey const lk_ball_wtd_prefactors
 
RealVectorOptionKey const lk_ball_waters_sp2
 
RealVectorOptionKey const lk_ball_waters_sp3
 
RealVectorOptionKey const lk_ball_waters_ring
 
RealOptionKey const lk_ball_waters_donor
 
RealOptionKey const lk_ball_bridge_angle_widthscale
 

Variable Documentation

BooleanOptionKey const basic::options::OptionKeys::dna::specificity::design_DNA

Referenced by add_rosetta_options_7().

RealVectorOptionKey const basic::options::OptionKeys::dna::specificity::dna_backbone_torsion_sdevs

Referenced by add_rosetta_options_7().

RealOptionKey const basic::options::OptionKeys::dna::specificity::dna_chi_torsion_sdev

Referenced by add_rosetta_options_7().

RealOptionKey const basic::options::OptionKeys::dna::specificity::dna_sugar_torsion_sdev

Referenced by add_rosetta_options_7().

BooleanOptionKey const basic::options::OptionKeys::dna::specificity::dump_pdbs

Referenced by add_rosetta_options_7().

BooleanOptionKey const basic::options::OptionKeys::dna::specificity::exclude_dna_dna

Referenced by add_rosetta_options_7().

BooleanOptionKey const basic::options::OptionKeys::dna::specificity::fast
FileVectorOptionKey const basic::options::OptionKeys::dna::specificity::frag_files
RealOptionKey const basic::options::OptionKeys::dna::specificity::lk_ball_bridge_angle_widthscale

Referenced by add_rosetta_options_7().

BooleanOptionKey const basic::options::OptionKeys::dna::specificity::lk_ball_for_bb

Referenced by add_rosetta_options_7().

RealOptionKey const basic::options::OptionKeys::dna::specificity::lk_ball_overlap_gap

Referenced by add_rosetta_options_7().

RealOptionKey const basic::options::OptionKeys::dna::specificity::lk_ball_overlap_width_A2

Referenced by add_rosetta_options_7().

RealOptionKey const basic::options::OptionKeys::dna::specificity::lk_ball_ramp_width_A2

Referenced by add_rosetta_options_7().

RealOptionKey const basic::options::OptionKeys::dna::specificity::lk_ball_water_fade

Referenced by add_rosetta_options_7().

RealOptionKey const basic::options::OptionKeys::dna::specificity::lk_ball_waters_donor

Referenced by add_rosetta_options_7().

RealVectorOptionKey const basic::options::OptionKeys::dna::specificity::lk_ball_waters_ring

Referenced by add_rosetta_options_7().

RealVectorOptionKey const basic::options::OptionKeys::dna::specificity::lk_ball_waters_sp2

Referenced by add_rosetta_options_7().

RealVectorOptionKey const basic::options::OptionKeys::dna::specificity::lk_ball_waters_sp3

Referenced by add_rosetta_options_7().

RealVectorOptionKey const basic::options::OptionKeys::dna::specificity::lk_ball_wtd_prefactors

Referenced by add_rosetta_options_7().

StringOptionKey const basic::options::OptionKeys::dna::specificity::lk_ball_wtd_tag

Referenced by add_rosetta_options_7().

StringVectorOptionKey const basic::options::OptionKeys::dna::specificity::methylate

Referenced by add_rosetta_options_7().

StringOptionKey const basic::options::OptionKeys::dna::specificity::min_type
RealOptionKey const basic::options::OptionKeys::dna::specificity::minimize_tolerance

Referenced by add_rosetta_options_7().

StringOptionKey const basic::options::OptionKeys::dna::specificity::mode
IntegerOptionKey const basic::options::OptionKeys::dna::specificity::motif_begin

Referenced by add_rosetta_options_7().

IntegerOptionKey const basic::options::OptionKeys::dna::specificity::motif_size

Referenced by add_rosetta_options_7().

IntegerOptionKey const basic::options::OptionKeys::dna::specificity::moving_jump

Referenced by add_rosetta_options_7().

IntegerOptionKey const basic::options::OptionKeys::dna::specificity::n_inner

Referenced by add_rosetta_options_7().

IntegerOptionKey const basic::options::OptionKeys::dna::specificity::n_outer

Referenced by add_rosetta_options_7().

IntegerOptionKey const basic::options::OptionKeys::dna::specificity::nloop

Referenced by add_rosetta_options_7().

IntegerOptionKey const basic::options::OptionKeys::dna::specificity::nstep_water

Referenced by add_rosetta_options_7().

BooleanOptionKey const basic::options::OptionKeys::dna::specificity::only_repack

Referenced by add_rosetta_options_7().

RealVectorOptionKey const basic::options::OptionKeys::dna::specificity::params
StringVectorOptionKey const basic::options::OptionKeys::dna::specificity::pdb_pos

Referenced by add_rosetta_options_7().

BooleanOptionKey const basic::options::OptionKeys::dna::specificity::post_minimize

Referenced by add_rosetta_options_7().

BooleanOptionKey const basic::options::OptionKeys::dna::specificity::pre_minimize

Referenced by add_rosetta_options_7().

BooleanOptionKey const basic::options::OptionKeys::dna::specificity::pre_pack

Referenced by add_rosetta_options_7().

BooleanOptionKey const basic::options::OptionKeys::dna::specificity::randomize_motif

Referenced by add_rosetta_options_7().

StringOptionKey const basic::options::OptionKeys::dna::specificity::score_function
BooleanOptionKey const basic::options::OptionKeys::dna::specificity::soft_rep
BooleanOptionKey const basic::options::OptionKeys::dna::specificity::specificity

Referenced by add_rosetta_options_7().

RealOptionKey const basic::options::OptionKeys::dna::specificity::Wdna_bp

Referenced by add_rosetta_options_7().

RealOptionKey const basic::options::OptionKeys::dna::specificity::Wdna_bs

Referenced by add_rosetta_options_7().

StringOptionKey const basic::options::OptionKeys::dna::specificity::weights_tag

Referenced by add_rosetta_options_7().

StringOptionKey const basic::options::OptionKeys::dna::specificity::weights_tag_list

Referenced by add_rosetta_options_7().

RealOptionKey const basic::options::OptionKeys::dna::specificity::Wfa_elec

Referenced by add_rosetta_options_7().