Rosetta  2020.37
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Variables
basic::options::OptionKeys::cluster::energy_based_clustering Namespace Reference

Variables

BooleanOptionKey const energy_based_clustering
 
BooleanOptionKey const prerelax
 
IntegerOptionKey const relax_rounds
 
StringOptionKey const cluster_by
 
BooleanOptionKey const use_CB
 
RealOptionKey const cluster_radius
 
IntegerVectorOptionKey const residues_to_ignore
 
IntegerVectorOptionKey const chains_to_ignore
 
IntegerOptionKey const limit_structures_per_cluster
 
IntegerOptionKey const limit_clusters
 
BooleanOptionKey const cyclic
 
IntegerOptionKey const cyclic_symmetry
 
BooleanOptionKey const cyclic_symmetry_mirroring
 
RealOptionKey const cyclic_symmetry_threshold
 
BooleanOptionKey const cluster_cyclic_permutations
 
IntegerOptionKey const cyclic_permutation_offset
 
BooleanOptionKey const perform_ABOXYZ_bin_analysis
 
BooleanOptionKey const mutate_to_ala
 
IntegerVectorOptionKey const disulfide_positions
 
BooleanOptionKey const homooligomer_swap
 
BooleanOptionKey const silent_output
 
FileVectorOptionKey const cst_file
 
StringVectorOptionKey const extra_rms_atoms
 
BooleanOptionKey const rebuild_all_in_dihedral_mode
 

Variable Documentation

IntegerVectorOptionKey const basic::options::OptionKeys::cluster::energy_based_clustering::chains_to_ignore

Referenced by add_rosetta_options_6().

StringOptionKey const basic::options::OptionKeys::cluster::energy_based_clustering::cluster_by

Referenced by add_rosetta_options_6().

BooleanOptionKey const basic::options::OptionKeys::cluster::energy_based_clustering::cluster_cyclic_permutations

Referenced by add_rosetta_options_6().

RealOptionKey const basic::options::OptionKeys::cluster::energy_based_clustering::cluster_radius
FileVectorOptionKey const basic::options::OptionKeys::cluster::energy_based_clustering::cst_file
BooleanOptionKey const basic::options::OptionKeys::cluster::energy_based_clustering::cyclic
IntegerOptionKey const basic::options::OptionKeys::cluster::energy_based_clustering::cyclic_permutation_offset

Referenced by add_rosetta_options_6().

IntegerOptionKey const basic::options::OptionKeys::cluster::energy_based_clustering::cyclic_symmetry

Referenced by add_rosetta_options_6().

BooleanOptionKey const basic::options::OptionKeys::cluster::energy_based_clustering::cyclic_symmetry_mirroring

Referenced by add_rosetta_options_6().

RealOptionKey const basic::options::OptionKeys::cluster::energy_based_clustering::cyclic_symmetry_threshold

Referenced by add_rosetta_options_6().

IntegerVectorOptionKey const basic::options::OptionKeys::cluster::energy_based_clustering::disulfide_positions

Referenced by add_rosetta_options_6().

BooleanOptionKey const basic::options::OptionKeys::cluster::energy_based_clustering::energy_based_clustering

Referenced by add_rosetta_options_6(), and main().

StringVectorOptionKey const basic::options::OptionKeys::cluster::energy_based_clustering::extra_rms_atoms

Referenced by add_rosetta_options_6().

BooleanOptionKey const basic::options::OptionKeys::cluster::energy_based_clustering::homooligomer_swap

Referenced by add_rosetta_options_6().

IntegerOptionKey const basic::options::OptionKeys::cluster::energy_based_clustering::limit_clusters

Referenced by add_rosetta_options_6().

IntegerOptionKey const basic::options::OptionKeys::cluster::energy_based_clustering::limit_structures_per_cluster

Referenced by add_rosetta_options_6().

BooleanOptionKey const basic::options::OptionKeys::cluster::energy_based_clustering::mutate_to_ala

Referenced by add_rosetta_options_6().

BooleanOptionKey const basic::options::OptionKeys::cluster::energy_based_clustering::perform_ABOXYZ_bin_analysis

Referenced by add_rosetta_options_6().

BooleanOptionKey const basic::options::OptionKeys::cluster::energy_based_clustering::prerelax

Referenced by add_rosetta_options_6().

BooleanOptionKey const basic::options::OptionKeys::cluster::energy_based_clustering::rebuild_all_in_dihedral_mode

Referenced by add_rosetta_options_6().

IntegerOptionKey const basic::options::OptionKeys::cluster::energy_based_clustering::relax_rounds

Referenced by add_rosetta_options_6().

IntegerVectorOptionKey const basic::options::OptionKeys::cluster::energy_based_clustering::residues_to_ignore

Referenced by add_rosetta_options_6().

BooleanOptionKey const basic::options::OptionKeys::cluster::energy_based_clustering::silent_output

Referenced by add_rosetta_options_6().

BooleanOptionKey const basic::options::OptionKeys::cluster::energy_based_clustering::use_CB

Referenced by add_rosetta_options_6().