Rosetta  2020.03
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Namespaces | Variables
basic::options::OptionKeys::packing Namespace Reference

Namespaces

 ex1
 
 ex1aro
 
 ex1aro_exposed
 
 ex2
 
 ex2aro
 
 ex2aro_exposed
 
 ex3
 
 ex4
 
 exdna
 
 packer_palette
 

Variables

BooleanOptionKey const packing
 
BooleanOptionKey const repack_only
 
BooleanOptionKey const prevent_repacking
 
RealOptionKey const cenrot_cutoff
 
BooleanOptionKey const ignore_ligand_chi
 
BooleanOptionKey const quasisymmetry
 
IntegerOptionKey const ndruns
 
BooleanOptionKey const soft_rep_design
 
RealOptionKey const mainchain_h_rebuild_threshold
 
BooleanOptionKey const use_electrostatic_repulsion
 
BooleanOptionKey const dump_rotamer_sets
 
RealOptionKey const dunbrack_prob_buried
 
RealOptionKey const dunbrack_prob_nonburied
 
RealOptionKey const dunbrack_prob_buried_semi
 
RealOptionKey const dunbrack_prob_nonburied_semi
 
BooleanOptionKey const no_optH
 
BooleanOptionKey const optH_MCA
 
BooleanOptionKey const pack_missing_sidechains
 
BooleanOptionKey const preserve_c_beta
 
BooleanOptionKey const flip_HNQ
 
IntegerVectorOptionKey const fix_his_tautomer
 
BooleanOptionKey const print_pymol_selection
 
IntegerOptionKey const extrachi_cutoff
 
FileVectorOptionKey const resfile
 
BooleanOptionKey const sc_branch_rotamers
 
RealOptionKey const outeriterations_scaling
 
RealOptionKey const inneriterations_scaling
 
StringVectorOptionKey const adducts
 
BooleanOptionKey const use_input_sc
 
FileVectorOptionKey const unboundrot
 
RealOptionKey const max_rotbump_energy
 
BooleanOptionKey const lazy_ig
 
BooleanOptionKey const double_lazy_ig
 
IntegerOptionKey const linmem_ig
 
IntegerOptionKey const multi_cool_annealer
 
BooleanOptionKey const sequence_symmetric_annealer
 
RealVectorOptionKey const minpack_temp_schedule
 
IntegerOptionKey const minpack_inner_iteration_scale
 
BooleanOptionKey const minpack_disable_bumpcheck
 

Variable Documentation

StringVectorOptionKey const basic::options::OptionKeys::packing::adducts

Referenced by add_rosetta_options_2().

RealOptionKey const basic::options::OptionKeys::packing::cenrot_cutoff

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::packing::double_lazy_ig

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::packing::dump_rotamer_sets

Referenced by add_rosetta_options_2().

RealOptionKey const basic::options::OptionKeys::packing::dunbrack_prob_buried

Referenced by add_rosetta_options_2().

RealOptionKey const basic::options::OptionKeys::packing::dunbrack_prob_buried_semi

Referenced by add_rosetta_options_2().

RealOptionKey const basic::options::OptionKeys::packing::dunbrack_prob_nonburied

Referenced by add_rosetta_options_2().

RealOptionKey const basic::options::OptionKeys::packing::dunbrack_prob_nonburied_semi

Referenced by add_rosetta_options_2().

IntegerOptionKey const basic::options::OptionKeys::packing::extrachi_cutoff

Referenced by add_rosetta_options_2(), and main().

IntegerVectorOptionKey const basic::options::OptionKeys::packing::fix_his_tautomer

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::packing::flip_HNQ

Referenced by add_rosetta_options_2(), and main().

BooleanOptionKey const basic::options::OptionKeys::packing::ignore_ligand_chi

Referenced by add_rosetta_options_2().

RealOptionKey const basic::options::OptionKeys::packing::inneriterations_scaling

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::packing::lazy_ig

Referenced by add_rosetta_options_2().

IntegerOptionKey const basic::options::OptionKeys::packing::linmem_ig

Referenced by add_rosetta_options_2().

RealOptionKey const basic::options::OptionKeys::packing::mainchain_h_rebuild_threshold

Referenced by add_rosetta_options_2().

RealOptionKey const basic::options::OptionKeys::packing::max_rotbump_energy

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::packing::minpack_disable_bumpcheck

Referenced by add_rosetta_options_2().

IntegerOptionKey const basic::options::OptionKeys::packing::minpack_inner_iteration_scale

Referenced by add_rosetta_options_2().

RealVectorOptionKey const basic::options::OptionKeys::packing::minpack_temp_schedule

Referenced by add_rosetta_options_2().

IntegerOptionKey const basic::options::OptionKeys::packing::multi_cool_annealer

Referenced by add_rosetta_options_2().

IntegerOptionKey const basic::options::OptionKeys::packing::ndruns

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::packing::no_optH

Referenced by add_rosetta_options_2(), and main().

BooleanOptionKey const basic::options::OptionKeys::packing::optH_MCA

Referenced by add_rosetta_options_2().

RealOptionKey const basic::options::OptionKeys::packing::outeriterations_scaling

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::packing::pack_missing_sidechains

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::packing::packing

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::packing::preserve_c_beta

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::packing::prevent_repacking
BooleanOptionKey const basic::options::OptionKeys::packing::print_pymol_selection

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::packing::quasisymmetry

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::packing::repack_only

Referenced by add_rosetta_options_2().

FileVectorOptionKey const basic::options::OptionKeys::packing::resfile
BooleanOptionKey const basic::options::OptionKeys::packing::sc_branch_rotamers

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::packing::sequence_symmetric_annealer

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::packing::soft_rep_design

Referenced by add_rosetta_options_2().

FileVectorOptionKey const basic::options::OptionKeys::packing::unboundrot

Referenced by add_rosetta_options_2(), and main().

BooleanOptionKey const basic::options::OptionKeys::packing::use_electrostatic_repulsion

Referenced by add_rosetta_options_2().

BooleanOptionKey const basic::options::OptionKeys::packing::use_input_sc