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calibur.cc File Reference
#include <devel/init.hh>
#include <basic/options/option_macros.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <cmath>
#include <cstdlib>
#include <protocols/cluster/calibur/AdjacentList.hh>
#include <protocols/cluster/calibur/Clustering.hh>
#include <protocols/cluster/calibur/SimPDB.hh>
#include <utility/string_constants.hh>
#include <utility/string_util.hh>

Macros

#define RANDOM_DECOY_SIZE_FOR_THRESHOLD   101
 
#define NUM_TRIALS_FOR_THRESHOLD   16
 

Functions

 OPT_1GRP_KEY (String, input, pdb_list) OPT_1GRP_KEY(Integer
 
start OPT_1GRP_KEY (Integer, res, end) OPT_1GRP_KEY(String
 
start chains OPT_1GRP_KEY (Real, strategy, thres) OPT_1GRP_KEY(Boolean
 
start chains nofilter OPT_1GRP_KEY (Integer, strategy, thres_finder) int main(int argc
 

Variables

 res
 
start chains strategy
 
start chains nofilter char ** argv
 

Macro Definition Documentation

#define NUM_TRIALS_FOR_THRESHOLD   16
#define RANDOM_DECOY_SIZE_FOR_THRESHOLD   101

Function Documentation

OPT_1GRP_KEY ( String  ,
input  ,
pdb_list   
)
start OPT_1GRP_KEY ( Integer  ,
res  ,
end   
)
start chains OPT_1GRP_KEY ( Real  ,
strategy  ,
thres   
)
start chains nofilter OPT_1GRP_KEY ( Integer  ,
strategy  ,
thres_finder   
)

Variable Documentation

start chains nofilter char** argv

Referenced by main().

start res
start chains strategy