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OptionKeys.cc.gen1.hh File Reference

Namespaces

 out
 
 out::path
 
 run
 
 run::PyMOLMover
 
 parser
 
 jd3
 
 jd2
 
 view
 
 score
 

Functions

PathOptionKey const out::path::mmCIF ("out:path:mmCIF")
 
PathOptionKey const out::path::mmtf ("out:path:mmtf")
 
BooleanOptionKey const run::run ("run")
 
FileVectorOptionKey const run::batches ("run:batches")
 
BooleanOptionKey const run::no_prof_info_in_silentout ("run:no_prof_info_in_silentout")
 
BooleanOptionKey const run::archive ("run:archive")
 
IntegerOptionKey const run::n_replica ("run:n_replica")
 
BooleanOptionKey const run::shuffle ("run:shuffle")
 
IntegerOptionKey const run::n_cycles ("run:n_cycles")
 
IntegerOptionKey const run::repeat ("run:repeat")
 
IntegerOptionKey const run::max_min_iter ("run:max_min_iter")
 
IntegerOptionKey const run::maxruntime ("run:maxruntime")
 
RealOptionKey const run::maxruntime_bufferfactor ("run:maxruntime_bufferfactor")
 
BooleanOptionKey const run::write_failures ("run:write_failures")
 
BooleanOptionKey const run::benchmark ("run:benchmark")
 
BooleanOptionKey const run::test_cycles ("run:test_cycles")
 
BooleanOptionKey const run::memory_test_cycles ("run:memory_test_cycles")
 
BooleanOptionKey const run::dry_run ("run:dry_run")
 
BooleanOptionKey const run::debug ("run:debug")
 
BooleanOptionKey const run::profile ("run:profile")
 
IntegerOptionKey const run::max_retry_job ("run:max_retry_job")
 
BooleanOptionKey const run::version ("run:version")
 
BooleanOptionKey const run::nodelay ("run:nodelay")
 
IntegerOptionKey const run::delay ("run:delay")
 
IntegerOptionKey const run::random_delay ("run:random_delay")
 
BooleanOptionKey const run::timer ("run:timer")
 
StringOptionKey const run::chain ("run:chain")
 
BooleanOptionKey const run::score_only ("run:score_only")
 
BooleanOptionKey const run::decoystats ("run:decoystats")
 
BooleanOptionKey const run::output_hbond_info ("run:output_hbond_info")
 
RealOptionKey const run::wide_nblist_extension ("run:wide_nblist_extension")
 
BooleanOptionKey const run::constant_seed ("run:constant_seed")
 
IntegerOptionKey const run::jran ("run:jran")
 
BooleanOptionKey const run::use_time_as_seed ("run:use_time_as_seed")
 
StringOptionKey const run::rng_seed_device ("run:rng_seed_device")
 
IntegerOptionKey const run::seed_offset ("run:seed_offset")
 
StringOptionKey const run::rng ("run:rng")
 
BooleanOptionKey const run::rebuild_disulf ("run:rebuild_disulf")
 
BooleanOptionKey const run::preserve_header ("run:preserve_header")
 
BooleanOptionKey const run::suppress_checkpoints ("run:suppress_checkpoints")
 
BooleanOptionKey const run::checkpoint ("run:checkpoint")
 
BooleanOptionKey const run::delete_checkpoints ("run:delete_checkpoints")
 
IntegerOptionKey const run::checkpoint_interval ("run:checkpoint_interval")
 
StringOptionKey const run::protocol ("run:protocol")
 
BooleanOptionKey const run::remove_ss_length_screen ("run:remove_ss_length_screen")
 
StringOptionKey const run::min_type ("run:min_type")
 
RealOptionKey const run::min_tolerance ("run:min_tolerance")
 
BooleanOptionKey const run::nblist_autoupdate ("run:nblist_autoupdate")
 
RealOptionKey const run::nblist_autoupdate_narrow ("run:nblist_autoupdate_narrow")
 
RealOptionKey const run::nblist_autoupdate_wide ("run:nblist_autoupdate_wide")
 
BooleanOptionKey const run::skip_set_reasonable_fold_tree ("run:skip_set_reasonable_fold_tree")
 
BooleanOptionKey const run::randomize_missing_coords ("run:randomize_missing_coords")
 
BooleanOptionKey const run::ignore_zero_occupancy ("run:ignore_zero_occupancy")
 
IntegerOptionKey const run::cycles_outer ("run:cycles_outer")
 
IntegerOptionKey const run::cycles_inner ("run:cycles_inner")
 
IntegerOptionKey const run::repack_rate ("run:repack_rate")
 
BooleanOptionKey const run::reinitialize_mover_for_each_job ("run:reinitialize_mover_for_each_job")
 
BooleanOptionKey const run::reinitialize_mover_for_new_input ("run:reinitialize_mover_for_new_input")
 
BooleanOptionKey const run::multiple_processes_writing_to_one_directory ("run:multiple_processes_writing_to_one_directory")
 
StringOptionKey const run::jobdist_miscfile_ext ("run:jobdist_miscfile_ext")
 
BooleanOptionKey const run::no_scorefile ("run:no_scorefile")
 
BooleanOptionKey const run::other_pose_to_scorefile ("run:other_pose_to_scorefile")
 
FileOptionKey const run::other_pose_scorefile ("run:other_pose_scorefile")
 
BooleanOptionKey const run::intermediate_scorefiles ("run:intermediate_scorefiles")
 
BooleanOptionKey const run::intermediate_structures ("run:intermediate_structures")
 
BooleanOptionKey const run::idealize_before_protocol ("run:idealize_before_protocol")
 
BooleanOptionKey const run::interactive ("run:interactive")
 
BooleanOptionKey const run::nosignal ("run:nosignal")
 
BooleanOptionKey const run::crash_to_console ("run:crash_to_console")
 
BooleanOptionKey const run::condor ("run:condor")
 
IntegerOptionKey const run::nproc ("run:nproc")
 
IntegerOptionKey const run::proc_id ("run:proc_id")
 
BooleanOptionKey const run::exit_if_missing_heavy_atoms ("run:exit_if_missing_heavy_atoms")
 
RealOptionKey const run::show_simulation_in_pymol ("run:show_simulation_in_pymol")
 
BooleanOptionKey const run::update_pymol_on_energy_changes_only ("run:update_pymol_on_energy_changes_only")
 
BooleanOptionKey const run::update_pymol_on_conformation_changes_only ("run:update_pymol_on_conformation_changes_only")
 
BooleanOptionKey const run::keep_pymol_simulation_history ("run:keep_pymol_simulation_history")
 
BooleanOptionKey const run::PyMOLMover::PyMOLMover ("run:PyMOLMover")
 
StringOptionKey const run::PyMOLMover::address ("run:PyMOLMover:address")
 
IntegerOptionKey const run::PyMOLMover::port ("run:PyMOLMover:port")
 
IntegerOptionKey const run::PyMOLMover::max_packet_size ("run:PyMOLMover:max_packet_size")
 
BooleanOptionKey const parser::parser ("parser")
 
StringOptionKey const parser::protocol ("parser:protocol")
 
StringVectorOptionKey const parser::script_vars ("parser:script_vars")
 
BooleanOptionKey const parser::view ("parser:view")
 
StringVectorOptionKey const parser::info ("parser:info")
 
StringOptionKey const parser::output_schema ("parser:output_schema")
 
BooleanOptionKey const parser::validate_and_exit ("parser:validate_and_exit")
 
StringOptionKey const parser::patchdock ("parser:patchdock")
 
IntegerVectorOptionKey const parser::patchdock_random_entry ("parser:patchdock_random_entry")
 
IntegerOptionKey const parser::inclusion_recursion_limit ("parser:inclusion_recursion_limit")
 
BooleanOptionKey const jd3::jd3 ("jd3")
 
BooleanOptionKey const jd3::mpi_work_partition_job_distributor ("jd3:mpi_work_partition_job_distributor")
 
FileOptionKey const jd3::job_definition_schema ("jd3:job_definition_schema")
 
BooleanOptionKey const jd3::mpi_fast_nonblocking_output ("jd3:mpi_fast_nonblocking_output")
 
IntegerOptionKey const jd3::n_archive_nodes ("jd3:n_archive_nodes")
 
BooleanOptionKey const jd3::do_not_archive_on_node0 ("jd3:do_not_archive_on_node0")
 
RealOptionKey const jd3::mpi_fraction_outputters ("jd3:mpi_fraction_outputters")
 
IntegerOptionKey const jd3::nthreads ("jd3:nthreads")
 
StringOptionKey const jd3::archive_on_disk ("jd3:archive_on_disk")
 
BooleanOptionKey const jd3::compress_job_results ("jd3:compress_job_results")
 
FileVectorOptionKey const jd3::resource_definition_files ("jd3:resource_definition_files")
 
FileOptionKey const jd3::resource_definition_schema ("jd3:resource_definition_schema")
 
BooleanOptionKey const jd3::load_input_poses_only_once ("jd3:load_input_poses_only_once")
 
BooleanOptionKey const jd3::checkpoint ("jd3:checkpoint")
 
IntegerOptionKey const jd3::checkpoint_period ("jd3:checkpoint_period")
 
StringOptionKey const jd3::checkpoint_directory ("jd3:checkpoint_directory")
 
BooleanOptionKey const jd3::restore_from_checkpoint ("jd3:restore_from_checkpoint")
 
BooleanOptionKey const jd3::continue_past_failed_checkpoint_restoration ("jd3:continue_past_failed_checkpoint_restoration")
 
BooleanOptionKey const jd3::keep_all_checkpoints ("jd3:keep_all_checkpoints")
 
IntegerOptionKey const jd3::keep_checkpoint ("jd3:keep_checkpoint")
 
StringVectorOptionKey const jd3::job_definition_script_vars ("jd3:job_definition_script_vars")
 
BooleanOptionKey const jd2::jd2 ("jd2")
 
BooleanOptionKey const jd2::pose_input_stream ("jd2:pose_input_stream")
 
BooleanOptionKey const jd2::lazy_silent_file_reader ("jd2:lazy_silent_file_reader")
 
BooleanOptionKey const jd2::mpi_nowait_for_remaining_jobs ("jd2:mpi_nowait_for_remaining_jobs")
 
RealOptionKey const jd2::mpi_timeout_factor ("jd2:mpi_timeout_factor")
 
BooleanOptionKey const jd2::mpi_work_partition_job_distributor ("jd2:mpi_work_partition_job_distributor")
 
BooleanOptionKey const jd2::mpi_file_buf_job_distributor ("jd2:mpi_file_buf_job_distributor")
 
BooleanOptionKey const jd2::mpi_filebuf_jobdistributor ("jd2:mpi_filebuf_jobdistributor")
 
BooleanOptionKey const jd2::mpi_fast_nonblocking_output ("jd2:mpi_fast_nonblocking_output")
 
BooleanOptionKey const jd2::input_empty_pose ("jd2:input_empty_pose")
 
BooleanOptionKey const jd2::dd_parser ("jd2:dd_parser")
 
IntegerOptionKey const jd2::ntrials ("jd2:ntrials")
 
StringOptionKey const jd2::generic_job_name ("jd2:generic_job_name")
 
BooleanOptionKey const jd2::no_output ("jd2:no_output")
 
BooleanOptionKey const jd2::enzdes_out ("jd2:enzdes_out")
 
IntegerOptionKey const jd2::buffer_silent_output ("jd2:buffer_silent_output")
 
RealOptionKey const jd2::buffer_flush_frequency ("jd2:buffer_flush_frequency")
 
BooleanOptionKey const jd2::delete_old_poses ("jd2:delete_old_poses")
 
FileOptionKey const jd2::checkpoint_file ("jd2:checkpoint_file")
 
BooleanOptionKey const jd2::failed_job_exception ("jd2:failed_job_exception")
 
IntegerOptionKey const jd2::max_nstruct_in_memory ("jd2:max_nstruct_in_memory")
 
BooleanOptionKey const jd2::sequential_mpi_job_distribution ("jd2:sequential_mpi_job_distribution")
 
BooleanOptionKey const jd2::grid_ensemble ("jd2:grid_ensemble")
 
BooleanOptionKey const jd2::seed_ensemble ("jd2:seed_ensemble")
 
RealVectorOptionKey const jd2::seed_ensemble_weights ("jd2:seed_ensemble_weights")
 
FileOptionKey const jd2::seed_ensemble_weights_file ("jd2:seed_ensemble_weights_file")
 
BooleanOptionKey const jd2::HOSTNAME_in_jobname ("jd2:HOSTNAME_in_jobname")
 
BooleanOptionKey const jd2::parse_script_once_only ("jd2:parse_script_once_only")
 
BooleanOptionKey const view::view ("view")
 
BooleanOptionKey const view::show_virtual_residues ("view:show_virtual_residues")
 
BooleanOptionKey const view::single_glycan_color ("view:single_glycan_color")
 
BooleanOptionKey const score::score_pose_cutpoint_variants ("score:score_pose_cutpoint_variants")
 
BooleanOptionKey const score::score ("score")
 
StringOptionKey const score::weights ("score:weights")
 
StringVectorOptionKey const score::set_weights ("score:set_weights")
 
StringOptionKey const score::pack_weights ("score:pack_weights")
 
StringOptionKey const score::soft_wts ("score:soft_wts")
 
BooleanOptionKey const score::docking_interface_score ("score:docking_interface_score")
 
RealOptionKey const score::min_score_score ("score:min_score_score")
 
StringOptionKey const score::custom_atom_pair ("score:custom_atom_pair")
 
FileVectorOptionKey const score::patch ("score:patch")
 
BooleanOptionKey const score::empty ("score:empty")
 
RealOptionKey const score::fa_max_dis ("score:fa_max_dis")
 
BooleanOptionKey const score::fa_Hatr ("score:fa_Hatr")
 
BooleanOptionKey const score::no_smooth_etables ("score:no_smooth_etables")
 
BooleanOptionKey const score::count_pair_hybrid ("score:count_pair_hybrid")
 
BooleanOptionKey const score::count_pair_full ("score:count_pair_full")
 
BooleanOptionKey const score::no_lk_polar_desolvation ("score:no_lk_polar_desolvation")
 
BooleanOptionKey const score::lk_polar_without_proline_N ("score:lk_polar_without_proline_N")
 
StringOptionKey const score::input_etables ("score:input_etables")
 
StringOptionKey const score::output_etables ("score:output_etables")
 
BooleanOptionKey const score::analytic_etable_evaluation ("score:analytic_etable_evaluation")
 
BooleanOptionKey const score::put_intra_into_total ("score:put_intra_into_total")
 
BooleanOptionKey const score::include_intra_res_protein ("score:include_intra_res_protein")
 
BooleanOptionKey const score::fa_stack_base_base_only ("score:fa_stack_base_base_only")
 
BooleanOptionKey const score::fa_stack_include_rna_protein ("score:fa_stack_include_rna_protein")
 
RealOptionKey const score::fa_stack_sol_prefactor ("score:fa_stack_sol_prefactor")
 
RealOptionKey const score::fa_stack_sol_stack_cutoff ("score:fa_stack_sol_stack_cutoff")
 
RealOptionKey const score::fa_stack_sol_dist_cutoff ("score:fa_stack_sol_dist_cutoff")
 
RealOptionKey const score::fa_stack_lr_prefactor ("score:fa_stack_lr_prefactor")
 
RealOptionKey const score::fa_stack_lr_stack_cutoff ("score:fa_stack_lr_stack_cutoff")
 
RealOptionKey const score::fa_stack_lr_dist_cutoff ("score:fa_stack_lr_dist_cutoff")
 
IntegerOptionKey const score::geom_sol_interres_path_distance_cutoff ("score:geom_sol_interres_path_distance_cutoff")
 
IntegerOptionKey const score::geom_sol_intrares_path_distance_cutoff ("score:geom_sol_intrares_path_distance_cutoff")
 
RealOptionKey const score::rms_target ("score:rms_target")
 
BooleanOptionKey const score::ramaneighbors ("score:ramaneighbors")
 
StringOptionKey const score::optH_weights ("score:optH_weights")
 
StringOptionKey const score::optH_patch ("score:optH_patch")
 
StringVectorOptionKey const score::hb_don_strength ("score:hb_don_strength")
 
StringVectorOptionKey const score::hb_acc_strength ("score:hb_acc_strength")
 
StringOptionKey const score::hbe_for_dH2O_aGEN_SP3SC_ssother ("score:hbe_for_dH2O_aGEN_SP3SC_ssother")
 
RealOptionKey const score::hb_max_energy ("score:hb_max_energy")
 
StringOptionKey const score::hbond_params ("score:hbond_params")
 
BooleanOptionKey const score::hbond_bb_per_residue_energy ("score:hbond_bb_per_residue_energy")
 
BooleanOptionKey const score::hbond_disable_bbsc_exclusion_rule ("score:hbond_disable_bbsc_exclusion_rule")
 
BooleanOptionKey const score::use_hb_env_dep ("score:use_hb_env_dep")
 
BooleanOptionKey const score::water_hybrid_sf ("score:water_hybrid_sf")
 
BooleanOptionKey const score::show_etable_contributions ("score:show_etable_contributions")
 
IntegerOptionKey const score::symE_units ("score:symE_units")
 
RealOptionKey const score::symE_bonus ("score:symE_bonus")
 
BooleanOptionKey const score::symmetric_gly_tables ("score:symmetric_gly_tables")
 
RealOptionKey const score::NV_lbound ("score:NV_lbound")
 
RealOptionKey const score::NV_ubound ("score:NV_ubound")
 
StringOptionKey const score::NV_table ("score:NV_table")
 
BooleanOptionKey const score::find_neighbors_3dgrid ("score:find_neighbors_3dgrid")
 
BooleanOptionKey const score::find_neighbors_stripehash ("score:find_neighbors_stripehash")
 
StringOptionKey const score::seqdep_refene_fname ("score:seqdep_refene_fname")
 
StringOptionKey const score::secondary_seqdep_refene_fname ("score:secondary_seqdep_refene_fname")
 
BooleanOptionKey const score::exact_occ_pairwise ("score:exact_occ_pairwise")
 
BooleanOptionKey const score::exact_occ_skip_Hbonders ("score:exact_occ_skip_Hbonders")
 
BooleanOptionKey const score::exact_occ_pairwise_by_res ("score:exact_occ_pairwise_by_res")
 
BooleanOptionKey const score::exact_occ_split_between_res ("score:exact_occ_split_between_res")
 
BooleanOptionKey const score::exact_occ_self_res_no_occ ("score:exact_occ_self_res_no_occ")
 
RealOptionKey const score::exact_occ_radius_scaling ("score:exact_occ_radius_scaling")
 
StringVectorOptionKey const score::ref_offsets ("score:ref_offsets")
 
RealOptionKey const score::ref_offset ("score:ref_offset")
 
BooleanOptionKey const score::output_residue_energies ("score:output_residue_energies")
 
StringOptionKey const score::fa_custom_pair_distance_file ("score:fa_custom_pair_distance_file")
 
RealOptionKey const score::disulf_matching_probe ("score:disulf_matching_probe")
 
RealVectorOptionKey const score::bonded_params ("score:bonded_params")
 
StringOptionKey const score::bonded_params_dir ("score:bonded_params_dir")
 
StringVectorOptionKey const score::extra_mm_params_dir ("score:extra_mm_params_dir")
 
StringOptionKey const score::gen_bonded_params_file ("score:gen_bonded_params_file")
 
StringOptionKey const score::torsion_distr_params_file ("score:torsion_distr_params_file")
 
StringOptionKey const score::gen_bonded_exclude_def_file ("score:gen_bonded_exclude_def_file")
 
BooleanOptionKey const score::genbonded_score_full ("score:genbonded_score_full")
 
BooleanOptionKey const score::genbonded_score_hybrid ("score:genbonded_score_hybrid")
 
StringOptionKey const score::extra_improper_file ("score:extra_improper_file")
 
BooleanOptionKey const score::cart_bonded_skip_cutpoints ("score:cart_bonded_skip_cutpoints")
 
RealOptionKey const score::pro_close_planar_constraint ("score:pro_close_planar_constraint")
 
BooleanOptionKey const score::no_pro_close_ring_closure ("score:no_pro_close_ring_closure")
 
RealOptionKey const score::ring_close_shadow_constraint ("score:ring_close_shadow_constraint")
 
BooleanOptionKey const score::linear_bonded_potential ("score:linear_bonded_potential")
 
RealOptionKey const score::free_side_chain_bonus ("score:free_side_chain_bonus")
 
BooleanOptionKey const score::compute_mg_sol_for_hydrogens ("score:compute_mg_sol_for_hydrogens")
 
IntegerVectorOptionKey const score::rg_local_span ("score:rg_local_span")
 
BooleanOptionKey const score::unmodifypot ("score:unmodifypot")
 
RealOptionKey const score::conc ("score:conc")
 
IntegerVectorOptionKey const score::sidechain_buried ("score:sidechain_buried")
 
IntegerVectorOptionKey const score::sidechain_exposed ("score:sidechain_exposed")
 
StringVectorOptionKey const score::aa_composition_setup_file ("score:aa_composition_setup_file")
 
StringOptionKey const score::aa_repeat_energy_penalty_file ("score:aa_repeat_energy_penalty_file")
 
RealOptionKey const score::approximate_buried_unsat_penalty_hbond_energy_threshold ("score:approximate_buried_unsat_penalty_hbond_energy_threshold")
 
RealOptionKey const score::approximate_buried_unsat_penalty_burial_atomic_depth ("score:approximate_buried_unsat_penalty_burial_atomic_depth")
 
RealOptionKey const score::approximate_buried_unsat_penalty_burial_probe_radius ("score:approximate_buried_unsat_penalty_burial_probe_radius")
 
RealOptionKey const score::approximate_buried_unsat_penalty_burial_resolution ("score:approximate_buried_unsat_penalty_burial_resolution")
 
RealOptionKey const score::approximate_buried_unsat_penalty_oversat_penalty ("score:approximate_buried_unsat_penalty_oversat_penalty")
 
BooleanOptionKey const score::approximate_buried_unsat_penalty_assume_const_backbone ("score:approximate_buried_unsat_penalty_assume_const_backbone")
 
BooleanOptionKey const score::approximate_buried_unsat_penalty_natural_corrections1 ("score:approximate_buried_unsat_penalty_natural_corrections1")
 
RealOptionKey const score::approximate_buried_unsat_penalty_hbond_bonus_cross_chain ("score:approximate_buried_unsat_penalty_hbond_bonus_cross_chain")
 
RealOptionKey const score::approximate_buried_unsat_penalty_hbond_bonus_ser_to_helix_bb ("score:approximate_buried_unsat_penalty_hbond_bonus_ser_to_helix_bb")
 
StringOptionKey const score::target_clash_pdb ("score:target_clash_pdb")
 
RealOptionKey const score::aspartimide_penalty_value ("score:aspartimide_penalty_value")
 
RealOptionKey const score::buried_unsatisfied_penalty_cone_angle_exponent ("score:buried_unsatisfied_penalty_cone_angle_exponent")
 
RealOptionKey const score::buried_unsatisfied_penalty_cone_angle_shift_factor ("score:buried_unsatisfied_penalty_cone_angle_shift_factor")
 
RealOptionKey const score::buried_unsatisfied_penalty_cone_dist_exponent ("score:buried_unsatisfied_penalty_cone_dist_exponent")
 
RealOptionKey const score::buried_unsatisfied_penalty_cone_dist_midpoint ("score:buried_unsatisfied_penalty_cone_dist_midpoint")
 
RealOptionKey const score::buried_unsatisfied_penalty_burial_threshold ("score:buried_unsatisfied_penalty_burial_threshold")
 
RealOptionKey const score::buried_unsatisfied_penalty_hbond_energy_threshold ("score:buried_unsatisfied_penalty_hbond_energy_threshold")
 
FileOptionKey const score::covalent_labeling_input ("score:covalent_labeling_input")
 
FileOptionKey const score::hrf_dynamics_input ("score:hrf_dynamics_input")
 
FileOptionKey const score::covalent_labeling_fa_input ("score:covalent_labeling_fa_input")
 
RealOptionKey const score::elec_min_dis ("score:elec_min_dis")
 
RealOptionKey const score::elec_max_dis ("score:elec_max_dis")
 
RealOptionKey const score::elec_die ("score:elec_die")
 
BooleanOptionKey const score::elec_r_option ("score:elec_r_option")
 
BooleanOptionKey const score::elec_sigmoidal_die ("score:elec_sigmoidal_die")
 
RealOptionKey const score::elec_sigmoidal_die_D ("score:elec_sigmoidal_die_D")
 
RealOptionKey const score::elec_sigmoidal_die_D0 ("score:elec_sigmoidal_die_D0")
 
RealOptionKey const score::elec_sigmoidal_die_S ("score:elec_sigmoidal_die_S")
 
BooleanOptionKey const score::stack_elec_sigmoidal_die ("score:stack_elec_sigmoidal_die")
 
BooleanOptionKey const score::elec_representative_cp ("score:elec_representative_cp")
 
BooleanOptionKey const score::elec_representative_cp_flip ("score:elec_representative_cp_flip")
 
BooleanOptionKey const score::eval_intrares_elec_ST_only ("score:eval_intrares_elec_ST_only")
 
BooleanOptionKey const score::smooth_fa_elec ("score:smooth_fa_elec")
 
StringOptionKey const score::grpelec_fade_type ("score:grpelec_fade_type")
 
RealOptionKey const score::grpelec_fade_param1 ("score:grpelec_fade_param1")
 
RealOptionKey const score::grpelec_fade_param2 ("score:grpelec_fade_param2")
 
StringOptionKey const score::elec_group_file ("score:elec_group_file")
 
StringOptionKey const score::elec_group_extrafile ("score:elec_group_extrafile")
 
BooleanOptionKey const score::grpelec_fade_hbond ("score:grpelec_fade_hbond")
 
RealVectorOptionKey const score::grpelec_max_qeps ("score:grpelec_max_qeps")
 
BooleanOptionKey const score::grpelec_context_dependent ("score:grpelec_context_dependent")
 
BooleanOptionKey const score::grp_cpfxn ("score:grp_cpfxn")
 
RealVectorOptionKey const score::grpelec_cpfxn_weight ("score:grpelec_cpfxn_weight")
 
StringOptionKey const score::hbnet_bonus_function_ramping ("score:hbnet_bonus_function_ramping")
 
IntegerOptionKey const score::hbnet_max_network_size ("score:hbnet_max_network_size")
 
RealOptionKey const score::elec_context_minstrength ("score:elec_context_minstrength")
 
RealOptionKey const score::elec_context_minburial ("score:elec_context_minburial")
 
RealOptionKey const score::elec_context_maxburial ("score:elec_context_maxburial")
 
BooleanOptionKey const score::use_polarization ("score:use_polarization")
 
BooleanOptionKey const score::use_gen_kirkwood ("score:use_gen_kirkwood")
 
RealOptionKey const score::protein_dielectric ("score:protein_dielectric")
 
RealOptionKey const score::water_dielectric ("score:water_dielectric")
 
RealOptionKey const score::facts_GBpair_cut ("score:facts_GBpair_cut")