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Variables
basic::options::OptionKeys::ddg Namespace Reference

Variables

BooleanOptionKey const ddg
 
BooleanOptionKey const opt_input_structure
 
BooleanOptionKey const pack_until_converge
 
BooleanOptionKey const no_constraints
 
BooleanOptionKey const use_rotamer_constraints_to_native
 
BooleanOptionKey const suppress_checkpointing
 
BooleanOptionKey const wt_only
 
BooleanOptionKey const mut_only
 
BooleanOptionKey const optimize_wt
 
BooleanOptionKey const output_silent
 
StringOptionKey const minimization_scorefunction
 
StringOptionKey const minimization_patch
 
BooleanOptionKey const min_cst
 
IntegerOptionKey const lowest_x_decoys
 
BooleanOptionKey const local_opt_only
 
BooleanOptionKey const print_per_res_diff
 
BooleanOptionKey const mean
 
BooleanOptionKey const min
 
BooleanOptionKey const no_bb_movement
 
BooleanOptionKey const initial_repack
 
IntegerOptionKey const interface_ddg
 
RealOptionKey const ens_variation
 
BooleanOptionKey const sc_min_only
 
BooleanOptionKey const rna_all_prot_sc_min_only
 
StringOptionKey const min_cst_weights
 
RealOptionKey const opt_radius
 
StringOptionKey const output_dir
 
StringOptionKey const last_accepted_pose_dir
 
BooleanOptionKey const min_with_cst
 
RealOptionKey const temperature
 
BooleanOptionKey const ramp_repulsive
 
StringOptionKey const mut_file
 
StringOptionKey const out_pdb_prefix
 
RealOptionKey const constraint_weight
 
RealOptionKey const harmonic_ca_tether
 
IntegerOptionKey const iterations
 
BooleanOptionKey const force_iterations
 
StringOptionKey const out
 
BooleanOptionKey const debug_output
 
BooleanOptionKey const dump_pdbs
 
StringOptionKey const weight_file
 
RealOptionKey const cst_dist_cutoff
 
BooleanOptionKey const cartesian
 
IntegerOptionKey const extract_element_nbrs
 
IntegerOptionKey const frag_nbrs
 
IntegerOptionKey const bbnbrs
 
IntegerOptionKey const nfrags
 
IntegerOptionKey const ntrials
 
BooleanOptionKey const optimize_proline
 
BooleanOptionKey const flex_bb
 
BooleanOptionKey const fd_mode
 
BooleanOptionKey const legacy
 
BooleanOptionKey const json
 
IntegerOptionKey const n_converged
 
RealOptionKey const score_cutoff
 

Variable Documentation

IntegerOptionKey const basic::options::OptionKeys::ddg::bbnbrs
BooleanOptionKey const basic::options::OptionKeys::ddg::cartesian

Referenced by add_rosetta_options_7().

RealOptionKey const basic::options::OptionKeys::ddg::constraint_weight

Referenced by add_rosetta_options_7().

RealOptionKey const basic::options::OptionKeys::ddg::cst_dist_cutoff
BooleanOptionKey const basic::options::OptionKeys::ddg::ddg
BooleanOptionKey const basic::options::OptionKeys::ddg::debug_output

Referenced by add_rosetta_options_7(), and main().

BooleanOptionKey const basic::options::OptionKeys::ddg::dump_pdbs

Referenced by add_rosetta_options_7(), and main().

RealOptionKey const basic::options::OptionKeys::ddg::ens_variation

Referenced by add_rosetta_options_7().

IntegerOptionKey const basic::options::OptionKeys::ddg::extract_element_nbrs

Referenced by add_rosetta_options_7().

BooleanOptionKey const basic::options::OptionKeys::ddg::fd_mode

Referenced by add_rosetta_options_7(), and main().

BooleanOptionKey const basic::options::OptionKeys::ddg::flex_bb

Referenced by add_rosetta_options_7().

BooleanOptionKey const basic::options::OptionKeys::ddg::force_iterations

Referenced by add_rosetta_options_7().

IntegerOptionKey const basic::options::OptionKeys::ddg::frag_nbrs

Referenced by add_rosetta_options_7().

RealOptionKey const basic::options::OptionKeys::ddg::harmonic_ca_tether
BooleanOptionKey const basic::options::OptionKeys::ddg::initial_repack

Referenced by add_rosetta_options_7().

IntegerOptionKey const basic::options::OptionKeys::ddg::interface_ddg

Referenced by add_rosetta_options_7(), and main().

IntegerOptionKey const basic::options::OptionKeys::ddg::iterations
BooleanOptionKey const basic::options::OptionKeys::ddg::json
StringOptionKey const basic::options::OptionKeys::ddg::last_accepted_pose_dir

Referenced by add_rosetta_options_7(), and run_mc().

BooleanOptionKey const basic::options::OptionKeys::ddg::legacy

Referenced by add_rosetta_options_7(), and main().

BooleanOptionKey const basic::options::OptionKeys::ddg::local_opt_only

Referenced by add_rosetta_options_7(), and main().

IntegerOptionKey const basic::options::OptionKeys::ddg::lowest_x_decoys

Referenced by add_rosetta_options_7().

BooleanOptionKey const basic::options::OptionKeys::ddg::mean

Referenced by add_rosetta_options_7().

BooleanOptionKey const basic::options::OptionKeys::ddg::min

Referenced by add_rosetta_options_7().

BooleanOptionKey const basic::options::OptionKeys::ddg::min_cst

Referenced by add_rosetta_options_7(), and main().

StringOptionKey const basic::options::OptionKeys::ddg::min_cst_weights

Referenced by add_rosetta_options_7().

BooleanOptionKey const basic::options::OptionKeys::ddg::min_with_cst

Referenced by add_rosetta_options_7(), and run_mc().

StringOptionKey const basic::options::OptionKeys::ddg::minimization_patch

Referenced by add_rosetta_options_7(), and main().

StringOptionKey const basic::options::OptionKeys::ddg::minimization_scorefunction

Referenced by add_rosetta_options_7(), and main().

StringOptionKey const basic::options::OptionKeys::ddg::mut_file

Referenced by add_rosetta_options_7(), and main().

BooleanOptionKey const basic::options::OptionKeys::ddg::mut_only

Referenced by add_rosetta_options_7(), and main().

IntegerOptionKey const basic::options::OptionKeys::ddg::n_converged

Referenced by add_rosetta_options_7().

IntegerOptionKey const basic::options::OptionKeys::ddg::nfrags
BooleanOptionKey const basic::options::OptionKeys::ddg::no_bb_movement

Referenced by add_rosetta_options_7(), and run_mc().

BooleanOptionKey const basic::options::OptionKeys::ddg::no_constraints
IntegerOptionKey const basic::options::OptionKeys::ddg::ntrials

Referenced by add_rosetta_options_7().

BooleanOptionKey const basic::options::OptionKeys::ddg::opt_input_structure

Referenced by add_rosetta_options_7().

RealOptionKey const basic::options::OptionKeys::ddg::opt_radius

Referenced by add_rosetta_options_7().

BooleanOptionKey const basic::options::OptionKeys::ddg::optimize_proline

Referenced by add_rosetta_options_7().

BooleanOptionKey const basic::options::OptionKeys::ddg::optimize_wt

Referenced by add_rosetta_options_7().

StringOptionKey const basic::options::OptionKeys::ddg::out

Referenced by add_rosetta_options_7().

StringOptionKey const basic::options::OptionKeys::ddg::out_pdb_prefix
StringOptionKey const basic::options::OptionKeys::ddg::output_dir
BooleanOptionKey const basic::options::OptionKeys::ddg::output_silent
BooleanOptionKey const basic::options::OptionKeys::ddg::pack_until_converge

Referenced by add_rosetta_options_7().

BooleanOptionKey const basic::options::OptionKeys::ddg::print_per_res_diff

Referenced by add_rosetta_options_7().

BooleanOptionKey const basic::options::OptionKeys::ddg::ramp_repulsive
BooleanOptionKey const basic::options::OptionKeys::ddg::rna_all_prot_sc_min_only
BooleanOptionKey const basic::options::OptionKeys::ddg::sc_min_only
RealOptionKey const basic::options::OptionKeys::ddg::score_cutoff

Referenced by add_rosetta_options_7().

BooleanOptionKey const basic::options::OptionKeys::ddg::suppress_checkpointing

Referenced by add_rosetta_options_7().

RealOptionKey const basic::options::OptionKeys::ddg::temperature

Referenced by add_rosetta_options_7().

BooleanOptionKey const basic::options::OptionKeys::ddg::use_rotamer_constraints_to_native

Referenced by add_rosetta_options_7().

StringOptionKey const basic::options::OptionKeys::ddg::weight_file

Referenced by add_rosetta_options_7(), and main().

BooleanOptionKey const basic::options::OptionKeys::ddg::wt_only

Referenced by add_rosetta_options_7(), and main().