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Functions
jd2 Namespace Reference

Functions

BooleanOptionKey const jd2 ("jd2")
 
BooleanOptionKey const pose_input_stream ("jd2:pose_input_stream")
 
BooleanOptionKey const lazy_silent_file_reader ("jd2:lazy_silent_file_reader")
 
BooleanOptionKey const mpi_nowait_for_remaining_jobs ("jd2:mpi_nowait_for_remaining_jobs")
 
RealOptionKey const mpi_timeout_factor ("jd2:mpi_timeout_factor")
 
BooleanOptionKey const mpi_work_partition_job_distributor ("jd2:mpi_work_partition_job_distributor")
 
BooleanOptionKey const mpi_file_buf_job_distributor ("jd2:mpi_file_buf_job_distributor")
 
BooleanOptionKey const mpi_filebuf_jobdistributor ("jd2:mpi_filebuf_jobdistributor")
 
BooleanOptionKey const mpi_fast_nonblocking_output ("jd2:mpi_fast_nonblocking_output")
 
BooleanOptionKey const input_empty_pose ("jd2:input_empty_pose")
 
BooleanOptionKey const dd_parser ("jd2:dd_parser")
 
IntegerOptionKey const ntrials ("jd2:ntrials")
 
StringOptionKey const generic_job_name ("jd2:generic_job_name")
 
BooleanOptionKey const no_output ("jd2:no_output")
 
BooleanOptionKey const enzdes_out ("jd2:enzdes_out")
 
IntegerOptionKey const buffer_silent_output ("jd2:buffer_silent_output")
 
RealOptionKey const buffer_flush_frequency ("jd2:buffer_flush_frequency")
 
BooleanOptionKey const delete_old_poses ("jd2:delete_old_poses")
 
FileOptionKey const checkpoint_file ("jd2:checkpoint_file")
 
BooleanOptionKey const failed_job_exception ("jd2:failed_job_exception")
 
IntegerOptionKey const max_nstruct_in_memory ("jd2:max_nstruct_in_memory")
 
BooleanOptionKey const sequential_mpi_job_distribution ("jd2:sequential_mpi_job_distribution")
 
BooleanOptionKey const grid_ensemble ("jd2:grid_ensemble")
 
BooleanOptionKey const seed_ensemble ("jd2:seed_ensemble")
 
RealVectorOptionKey const seed_ensemble_weights ("jd2:seed_ensemble_weights")
 
FileOptionKey const seed_ensemble_weights_file ("jd2:seed_ensemble_weights_file")
 
BooleanOptionKey const HOSTNAME_in_jobname ("jd2:HOSTNAME_in_jobname")
 

Function Documentation

RealOptionKey const jd2::buffer_flush_frequency ( "jd2:buffer_flush_frequency"  )
IntegerOptionKey const jd2::buffer_silent_output ( "jd2:buffer_silent_output"  )
FileOptionKey const jd2::checkpoint_file ( "jd2:checkpoint_file"  )
BooleanOptionKey const jd2::dd_parser ( "jd2:dd_parser"  )
BooleanOptionKey const jd2::delete_old_poses ( "jd2:delete_old_poses"  )
BooleanOptionKey const jd2::enzdes_out ( "jd2:enzdes_out"  )
BooleanOptionKey const jd2::failed_job_exception ( "jd2:failed_job_exception"  )
StringOptionKey const jd2::generic_job_name ( "jd2:generic_job_name"  )
BooleanOptionKey const jd2::grid_ensemble ( "jd2:grid_ensemble"  )
BooleanOptionKey const jd2::HOSTNAME_in_jobname ( "jd2:HOSTNAME_in_jobname"  )
BooleanOptionKey const jd2::input_empty_pose ( "jd2:input_empty_pose"  )
BooleanOptionKey const jd2::jd2 ( "jd2"  )
BooleanOptionKey const jd2::lazy_silent_file_reader ( "jd2:lazy_silent_file_reader"  )
IntegerOptionKey const jd2::max_nstruct_in_memory ( "jd2:max_nstruct_in_memory"  )
BooleanOptionKey const jd2::mpi_fast_nonblocking_output ( "jd2:mpi_fast_nonblocking_output"  )
BooleanOptionKey const jd2::mpi_file_buf_job_distributor ( "jd2:mpi_file_buf_job_distributor"  )
BooleanOptionKey const jd2::mpi_filebuf_jobdistributor ( "jd2:mpi_filebuf_jobdistributor"  )
BooleanOptionKey const jd2::mpi_nowait_for_remaining_jobs ( "jd2:mpi_nowait_for_remaining_jobs"  )
RealOptionKey const jd2::mpi_timeout_factor ( "jd2:mpi_timeout_factor"  )
BooleanOptionKey const jd2::mpi_work_partition_job_distributor ( "jd2:mpi_work_partition_job_distributor"  )
BooleanOptionKey const jd2::no_output ( "jd2:no_output"  )
IntegerOptionKey const jd2::ntrials ( "jd2:ntrials"  )
BooleanOptionKey const jd2::pose_input_stream ( "jd2:pose_input_stream"  )
BooleanOptionKey const jd2::seed_ensemble ( "jd2:seed_ensemble"  )
RealVectorOptionKey const jd2::seed_ensemble_weights ( "jd2:seed_ensemble_weights"  )
FileOptionKey const jd2::seed_ensemble_weights_file ( "jd2:seed_ensemble_weights_file"  )
BooleanOptionKey const jd2::sequential_mpi_job_distribution ( "jd2:sequential_mpi_job_distribution"  )