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abinitio.OptionKeys.gen.hh File Reference

basic::options::OptionKeys collection More...

#include <basic/options/keys/OptionKeys.hh>

Namespaces

 basic
 Tags used to tag messeges sent by MPI functions used to decide whether a slave is requesting a new job id or flagging as job as being a bad input.
 
 basic::options
 
 basic::options::OptionKeys
 
 basic::options::OptionKeys::abinitio
 
 basic::options::OptionKeys::abinitio::star
 

Variables

BooleanOptionKey const basic::options::OptionKeys::abinitio::abinitio
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::membrane
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::use_loophash_filter
 
RealOptionKey const basic::options::OptionKeys::abinitio::loophash_filter_acceptance_rate
 
FileOptionKey const basic::options::OptionKeys::abinitio::kill_hairpins
 
RealOptionKey const basic::options::OptionKeys::abinitio::kill_hairpins_frequency
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::smooth_cycles_only
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::relax
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::final_clean_relax
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::fastrelax
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::multifastrelax
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::debug
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::clear_pose_cache
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::explicit_pdb_debug
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::use_filters
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::use_trRosetta_constraints
 
RealOptionKey const basic::options::OptionKeys::abinitio::increase_cycles
 
IntegerOptionKey const basic::options::OptionKeys::abinitio::number_3mer_frags
 
IntegerOptionKey const basic::options::OptionKeys::abinitio::number_9mer_frags
 
RealOptionKey const basic::options::OptionKeys::abinitio::temperature
 
RealOptionKey const basic::options::OptionKeys::abinitio::rg_reweight
 
RealOptionKey const basic::options::OptionKeys::abinitio::rsd_wt_helix
 
RealOptionKey const basic::options::OptionKeys::abinitio::rsd_wt_strand
 
RealOptionKey const basic::options::OptionKeys::abinitio::rsd_wt_loop
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::skip_convergence_check
 
FileVectorOptionKey const basic::options::OptionKeys::abinitio::stage1_patch
 
FileVectorOptionKey const basic::options::OptionKeys::abinitio::stage2_patch
 
FileVectorOptionKey const basic::options::OptionKeys::abinitio::stage3a_patch
 
FileVectorOptionKey const basic::options::OptionKeys::abinitio::stage3b_patch
 
FileVectorOptionKey const basic::options::OptionKeys::abinitio::stage4_patch
 
FileVectorOptionKey const basic::options::OptionKeys::abinitio::stage5_patch
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::steal_3mers
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::steal_9mers
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::no_write_failures
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::relax_failures
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::relax_with_jumps
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::process_store
 
IntegerVectorOptionKey const basic::options::OptionKeys::abinitio::fix_residues_to_native
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::return_full_atom
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::detect_disulfide_before_relax
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::close_loops
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::bGDT
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::dump_frags
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::jdist_rerun
 
RealOptionKey const basic::options::OptionKeys::abinitio::perturb
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::rerun
 
IntegerVectorOptionKey const basic::options::OptionKeys::abinitio::rmsd_residues
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::start_native
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::cyclic_peptide
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::debug_structures
 
FileOptionKey const basic::options::OptionKeys::abinitio::log_frags
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::only_stage1
 
RealOptionKey const basic::options::OptionKeys::abinitio::end_bias
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::apply_end_bias
 
IntegerOptionKey const basic::options::OptionKeys::abinitio::symmetry_residue
 
RealOptionKey const basic::options::OptionKeys::abinitio::vdw_weight_stage1
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::override_vdw_all_stages
 
IntegerVectorOptionKey const basic::options::OptionKeys::abinitio::recover_low_in_stages
 
IntegerVectorOptionKey const basic::options::OptionKeys::abinitio::skip_stages
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::close_chbrk
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::include_stage5
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::close_loops_by_idealizing
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::optimize_cutpoints_using_kic
 
IntegerOptionKey const basic::options::OptionKeys::abinitio::optimize_cutpoints_margin
 
BooleanOptionKey const basic::options::OptionKeys::abinitio::star::star
 
RealOptionKey const basic::options::OptionKeys::abinitio::star::initial_dist_cutoff
 
IntegerOptionKey const basic::options::OptionKeys::abinitio::star::min_unaligned_len
 

Detailed Description

basic::options::OptionKeys collection

Author
Stuart G. Mentzer (Stuar.nosp@m.t_Me.nosp@m.ntzer.nosp@m.@obj.nosp@m.exx.c.nosp@m.om)
James M. Thompson (tex@u.nosp@m..was.nosp@m.hingt.nosp@m.on.e.nosp@m.du)