Rosetta  2019.47
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rna_score.cc File Reference
#include <core/types.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/io/silent/BinarySilentStruct.hh>
#include <core/io/silent/SilentFileOptions.hh>
#include <core/io/silent/util.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/rms_util.hh>
#include <core/scoring/rna/RNA_ScoringInfo.hh>
#include <core/energy_methods/RNA_ChemicalMappingEnergy.hh>
#include <core/pose/rna/RNA_DataInfo.hh>
#include <basic/options/option.hh>
#include <basic/options/option_macros.hh>
#include <basic/database/open.hh>
#include <protocols/viewer/viewers.hh>
#include <core/pose/Pose.hh>
#include <core/pose/rna/util.hh>
#include <core/pose/full_model_info/FullModelInfo.hh>
#include <core/pose/datacache/CacheableDataType.hh>
#include <basic/datacache/BasicDataCache.hh>
#include <core/pose/extra_pose_info_util.hh>
#include <devel/init.hh>
#include <core/import_pose/import_pose.hh>
#include <core/import_pose/FullModelPoseBuilder.hh>
#include <core/import_pose/pose_stream/PoseInputStream.hh>
#include <core/import_pose/pose_stream/PDBPoseInputStream.hh>
#include <core/import_pose/pose_stream/SilentFilePoseInputStream.hh>
#include <utility/vector1.hh>
#include <ObjexxFCL/string.functions.hh>
#include <protocols/stepwise/modeler/util.hh>
#include <protocols/stepwise/modeler/rna/util.hh>
#include <protocols/stepwise/modeler/align/util.hh>
#include <protocols/rna/denovo/RNA_DeNovoPoseInitializer.hh>
#include <core/io/rna/RNA_DataReader.hh>
#include <core/pose/PDBInfo.hh>
#include <core/scoring/ScoreType.hh>
#include <core/scoring/etable/EtableEnergy.hh>
#include <core/scoring/etable/EtableEnergyCreator.hh>
#include <core/scoring/ScoringManager.hh>
#include <core/scoring/Energies.hh>
#include <core/scoring/etable/BaseEtableEnergy.hh>
#include <core/scoring/etable/BaseEtableEnergy.tmpl.hh>
#include <core/scoring/etable/count_pair/CountPairFunction.hh>
#include <core/scoring/etable/count_pair/CountPairGeneric.hh>
#include <core/scoring/etable/count_pair/CountPairFactory.hh>
#include <core/scoring/etable/atom_pair_energy_inline.hh>
#include <core/util/SwitchResidueTypeSet.hh>
#include <protocols/moves/Mover.hh>
#include <iostream>
#include <string>
#include <numeric/conversions.hh>
#include <basic/Tracer.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/chemical.OptionKeys.gen.hh>
#include <basic/options/keys/full_model.OptionKeys.gen.hh>
#include <basic/options/keys/out.OptionKeys.gen.hh>
#include <basic/options/keys/rna.OptionKeys.gen.hh>
#include <basic/options/keys/score.OptionKeys.gen.hh>
#include <basic/options/keys/stepwise.OptionKeys.gen.hh>
#include <protocols/jd2/util.hh>
#include <protocols/jd2/internal_util.hh>
#include <protocols/jd2/JobDistributor.hh>
#include <utility/excn/Exceptions.hh>

Classes

class  RNA_ScoreMover
 

Functions

void do_color_by_score (core::pose::Pose &pose)
 
Real calc_dihedral_rms (core::pose::Pose const &pose, core::pose::Pose const &native_pose, bool verbose=false)
 
void * my_main (void *)
 
int main (int argc, char *argv[])
 

Variables

static basic::Tracer TR ("apps.public.rna.util.rna_score")
 

Function Documentation

Real calc_dihedral_rms ( core::pose::Pose const &  pose,
core::pose::Pose const &  native_pose,
bool  verbose = false 
)
void do_color_by_score ( core::pose::Pose pose)
int main ( int  argc,
char *  argv[] 
)
void* my_main ( void *  )

Variable Documentation

basic::Tracer TR("apps.public.rna.util.rna_score")
static