Rosetta  2020.37
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pocket_grid Namespace Reference

Functions

BooleanOptionKey const pocket_grid ("pocket_grid")
 
RealOptionKey const pocket_grid_size ("pocket_grid:pocket_grid_size")
 
RealOptionKey const pocket_grid_size_x ("pocket_grid:pocket_grid_size_x")
 
RealOptionKey const pocket_grid_size_y ("pocket_grid:pocket_grid_size_y")
 
RealOptionKey const pocket_grid_size_z ("pocket_grid:pocket_grid_size_z")
 
RealOptionKey const pocket_grid_spacing ("pocket_grid:pocket_grid_spacing")
 
RealOptionKey const pocket_max_spacing ("pocket_grid:pocket_max_spacing")
 
RealOptionKey const pocket_min_size ("pocket_grid:pocket_min_size")
 
RealOptionKey const pocket_max_size ("pocket_grid:pocket_max_size")
 
RealOptionKey const pocket_probe_radius ("pocket_grid:pocket_probe_radius")
 
StringOptionKey const central_relax_pdb_num ("pocket_grid:central_relax_pdb_num")
 
IntegerOptionKey const pocket_ntrials ("pocket_grid:pocket_ntrials")
 
IntegerOptionKey const pocket_num_angles ("pocket_grid:pocket_num_angles")
 
BooleanOptionKey const pocket_side ("pocket_grid:pocket_side")
 
BooleanOptionKey const pocket_dump_pdbs ("pocket_grid:pocket_dump_pdbs")
 
BooleanOptionKey const pocket_dump_exemplars ("pocket_grid:pocket_dump_exemplars")
 
BooleanOptionKey const pocket_filter_by_exemplar ("pocket_grid:pocket_filter_by_exemplar")
 
BooleanOptionKey const pocket_limit_exemplar_color ("pocket_grid:pocket_limit_exemplar_color")
 
BooleanOptionKey const pocket_limit_small_exemplars ("pocket_grid:pocket_limit_small_exemplars")
 
BooleanOptionKey const pocket_dump_rama ("pocket_grid:pocket_dump_rama")
 
BooleanOptionKey const pocket_restrict_size ("pocket_grid:pocket_restrict_size")
 
BooleanOptionKey const pocket_ignore_buried ("pocket_grid:pocket_ignore_buried")
 
BooleanOptionKey const pocket_only_buried ("pocket_grid:pocket_only_buried")
 
BooleanOptionKey const pocket_psp ("pocket_grid:pocket_psp")
 
BooleanOptionKey const pocket_sps ("pocket_grid:pocket_sps")
 
BooleanOptionKey const pocket_search13 ("pocket_grid:pocket_search13")
 
RealOptionKey const pocket_surface_score ("pocket_grid:pocket_surface_score")
 
RealOptionKey const pocket_surface_dist ("pocket_grid:pocket_surface_dist")
 
RealOptionKey const pocket_buried_score ("pocket_grid:pocket_buried_score")
 
RealOptionKey const pocket_buried_dist ("pocket_grid:pocket_buried_dist")
 
RealOptionKey const pocket_exemplar_vdw_pen ("pocket_grid:pocket_exemplar_vdw_pen")
 
BooleanOptionKey const pocket_debug_output ("pocket_grid:pocket_debug_output")
 
BooleanOptionKey const dump_pocketGrid ("pocket_grid:dump_pocketGrid")
 
BooleanOptionKey const dump_Grid ("pocket_grid:dump_Grid")
 
BooleanOptionKey const extend_eggshell ("pocket_grid:extend_eggshell")
 
RealOptionKey const extend_eggshell_dist ("pocket_grid:extend_eggshell_dist")
 
RealOptionKey const extra_eggshell_dist ("pocket_grid:extra_eggshell_dist")
 
RealOptionKey const eggshell_dist ("pocket_grid:eggshell_dist")
 
BooleanOptionKey const reduce_rays ("pocket_grid:reduce_rays")
 
BooleanOptionKey const pocket_static_grid ("pocket_grid:pocket_static_grid")
 
BooleanOptionKey const dump_espGrid ("pocket_grid:dump_espGrid")
 
BooleanOptionKey const dump_connollySurface ("pocket_grid:dump_connollySurface")
 
RealOptionKey const esp_buffer_dist ("pocket_grid:esp_buffer_dist")
 
BooleanOptionKey const round_pocketGrid_center ("pocket_grid:round_pocketGrid_center")
 

Function Documentation

StringOptionKey const pocket_grid::central_relax_pdb_num ( "pocket_grid:central_relax_pdb_num"  )
BooleanOptionKey const pocket_grid::dump_connollySurface ( "pocket_grid:dump_connollySurface"  )
BooleanOptionKey const pocket_grid::dump_espGrid ( "pocket_grid:dump_espGrid"  )
BooleanOptionKey const pocket_grid::dump_Grid ( "pocket_grid:dump_Grid"  )
BooleanOptionKey const pocket_grid::dump_pocketGrid ( "pocket_grid:dump_pocketGrid"  )
RealOptionKey const pocket_grid::eggshell_dist ( "pocket_grid:eggshell_dist"  )
RealOptionKey const pocket_grid::esp_buffer_dist ( "pocket_grid:esp_buffer_dist"  )
BooleanOptionKey const pocket_grid::extend_eggshell ( "pocket_grid:extend_eggshell"  )
RealOptionKey const pocket_grid::extend_eggshell_dist ( "pocket_grid:extend_eggshell_dist"  )
RealOptionKey const pocket_grid::extra_eggshell_dist ( "pocket_grid:extra_eggshell_dist"  )
RealOptionKey const pocket_grid::pocket_buried_dist ( "pocket_grid:pocket_buried_dist"  )
RealOptionKey const pocket_grid::pocket_buried_score ( "pocket_grid:pocket_buried_score"  )
BooleanOptionKey const pocket_grid::pocket_debug_output ( "pocket_grid:pocket_debug_output"  )
BooleanOptionKey const pocket_grid::pocket_dump_exemplars ( "pocket_grid:pocket_dump_exemplars"  )
BooleanOptionKey const pocket_grid::pocket_dump_pdbs ( "pocket_grid:pocket_dump_pdbs"  )
BooleanOptionKey const pocket_grid::pocket_dump_rama ( "pocket_grid:pocket_dump_rama"  )
RealOptionKey const pocket_grid::pocket_exemplar_vdw_pen ( "pocket_grid:pocket_exemplar_vdw_pen"  )
BooleanOptionKey const pocket_grid::pocket_filter_by_exemplar ( "pocket_grid:pocket_filter_by_exemplar"  )
BooleanOptionKey const pocket_grid::pocket_grid ( "pocket_grid"  )
RealOptionKey const pocket_grid::pocket_grid_size ( "pocket_grid:pocket_grid_size"  )
RealOptionKey const pocket_grid::pocket_grid_size_x ( "pocket_grid:pocket_grid_size_x"  )
RealOptionKey const pocket_grid::pocket_grid_size_y ( "pocket_grid:pocket_grid_size_y"  )
RealOptionKey const pocket_grid::pocket_grid_size_z ( "pocket_grid:pocket_grid_size_z"  )
RealOptionKey const pocket_grid::pocket_grid_spacing ( "pocket_grid:pocket_grid_spacing"  )
BooleanOptionKey const pocket_grid::pocket_ignore_buried ( "pocket_grid:pocket_ignore_buried"  )
BooleanOptionKey const pocket_grid::pocket_limit_exemplar_color ( "pocket_grid:pocket_limit_exemplar_color"  )
BooleanOptionKey const pocket_grid::pocket_limit_small_exemplars ( "pocket_grid:pocket_limit_small_exemplars"  )
RealOptionKey const pocket_grid::pocket_max_size ( "pocket_grid:pocket_max_size"  )
RealOptionKey const pocket_grid::pocket_max_spacing ( "pocket_grid:pocket_max_spacing"  )
RealOptionKey const pocket_grid::pocket_min_size ( "pocket_grid:pocket_min_size"  )
IntegerOptionKey const pocket_grid::pocket_ntrials ( "pocket_grid:pocket_ntrials"  )
IntegerOptionKey const pocket_grid::pocket_num_angles ( "pocket_grid:pocket_num_angles"  )
BooleanOptionKey const pocket_grid::pocket_only_buried ( "pocket_grid:pocket_only_buried"  )
RealOptionKey const pocket_grid::pocket_probe_radius ( "pocket_grid:pocket_probe_radius"  )
BooleanOptionKey const pocket_grid::pocket_psp ( "pocket_grid:pocket_psp"  )
BooleanOptionKey const pocket_grid::pocket_restrict_size ( "pocket_grid:pocket_restrict_size"  )
BooleanOptionKey const pocket_grid::pocket_search13 ( "pocket_grid:pocket_search13"  )
BooleanOptionKey const pocket_grid::pocket_side ( "pocket_grid:pocket_side"  )
BooleanOptionKey const pocket_grid::pocket_sps ( "pocket_grid:pocket_sps"  )
BooleanOptionKey const pocket_grid::pocket_static_grid ( "pocket_grid:pocket_static_grid"  )
RealOptionKey const pocket_grid::pocket_surface_dist ( "pocket_grid:pocket_surface_dist"  )
RealOptionKey const pocket_grid::pocket_surface_score ( "pocket_grid:pocket_surface_score"  )
BooleanOptionKey const pocket_grid::reduce_rays ( "pocket_grid:reduce_rays"  )
BooleanOptionKey const pocket_grid::round_pocketGrid_center ( "pocket_grid:round_pocketGrid_center"  )