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mp.OptionKeys.gen.hh File Reference

basic::options::OptionKeys collection More...

#include <basic/options/keys/OptionKeys.hh>

Namespaces

 basic
 Tags used to tag messeges sent by MPI functions used to decide whether a slave is requesting a new job id or flagging as job as being a bad input.
 
 basic::options
 
 basic::options::OptionKeys
 
 basic::options::OptionKeys::mp
 
 basic::options::OptionKeys::mp::lipids
 
 basic::options::OptionKeys::mp::viewer
 
 basic::options::OptionKeys::mp::visualize
 
 basic::options::OptionKeys::mp::scoring
 
 basic::options::OptionKeys::mp::setup
 
 basic::options::OptionKeys::mp::lipid_acc
 
 basic::options::OptionKeys::mp::transform
 
 basic::options::OptionKeys::mp::assembly
 
 basic::options::OptionKeys::mp::dock
 
 basic::options::OptionKeys::mp::quickrelax
 
 basic::options::OptionKeys::mp::mutate_relax
 
 basic::options::OptionKeys::mp::benchmark
 
 basic::options::OptionKeys::mp::benchmark::ideal_helix
 
 basic::options::OptionKeys::mp::benchmark::tilt_angle
 
 basic::options::OptionKeys::mp::output
 

Variables

BooleanOptionKey const basic::options::OptionKeys::mp::mp
 
BooleanOptionKey const basic::options::OptionKeys::mp::restore_lazaridis_imm_behavior
 
RealOptionKey const basic::options::OptionKeys::mp::thickness
 
RealOptionKey const basic::options::OptionKeys::mp::membrane_core
 
RealOptionKey const basic::options::OptionKeys::mp::steepness
 
RealVectorOptionKey const basic::options::OptionKeys::mp::center_start
 
RealOptionKey const basic::options::OptionKeys::mp::center_delta
 
RealOptionKey const basic::options::OptionKeys::mp::center_search_cycles
 
RealVectorOptionKey const basic::options::OptionKeys::mp::normal_start
 
RealOptionKey const basic::options::OptionKeys::mp::normal_angle_start
 
RealOptionKey const basic::options::OptionKeys::mp::normal_angle_delta
 
RealOptionKey const basic::options::OptionKeys::mp::normal_search_cycles
 
RealOptionKey const basic::options::OptionKeys::mp::chain_normal_angle_max
 
RealOptionKey const basic::options::OptionKeys::mp::pose_normal_angle_max
 
BooleanOptionKey const basic::options::OptionKeys::mp::no_interpolate_Mpair
 
BooleanOptionKey const basic::options::OptionKeys::mp::Hbond_depth_correction
 
BooleanOptionKey const basic::options::OptionKeys::mp::TMprojection
 
RealOptionKey const basic::options::OptionKeys::mp::wt_TMprojection
 
BooleanOptionKey const basic::options::OptionKeys::mp::non_helix
 
RealOptionKey const basic::options::OptionKeys::mp::wt_non_helix
 
BooleanOptionKey const basic::options::OptionKeys::mp::termini
 
RealOptionKey const basic::options::OptionKeys::mp::wt_termini
 
BooleanOptionKey const basic::options::OptionKeys::mp::secstruct
 
RealOptionKey const basic::options::OptionKeys::mp::wt_secstruct
 
BooleanOptionKey const basic::options::OptionKeys::mp::spanning
 
RealOptionKey const basic::options::OptionKeys::mp::wt_spanning
 
BooleanOptionKey const basic::options::OptionKeys::mp::lipids::lipids
 
StringOptionKey const basic::options::OptionKeys::mp::lipids::composition
 
RealOptionKey const basic::options::OptionKeys::mp::lipids::temperature
 
BooleanOptionKey const basic::options::OptionKeys::mp::lipids::has_pore
 
BooleanOptionKey const basic::options::OptionKeys::mp::viewer::viewer
 
RealOptionKey const basic::options::OptionKeys::mp::viewer::thickness
 
IntegerOptionKey const basic::options::OptionKeys::mp::viewer::num_points
 
BooleanOptionKey const basic::options::OptionKeys::mp::visualize::visualize
 
BooleanOptionKey const basic::options::OptionKeys::mp::visualize::embedding
 
RealOptionKey const basic::options::OptionKeys::mp::visualize::spacing
 
RealOptionKey const basic::options::OptionKeys::mp::visualize::width
 
RealOptionKey const basic::options::OptionKeys::mp::visualize::thickness
 
RealOptionKey const basic::options::OptionKeys::mp::visualize::plane_radius
 
BooleanOptionKey const basic::options::OptionKeys::mp::scoring::scoring
 
BooleanOptionKey const basic::options::OptionKeys::mp::scoring::hbond
 
BooleanOptionKey const basic::options::OptionKeys::mp::setup::setup
 
StringVectorOptionKey const basic::options::OptionKeys::mp::setup::spanfiles
 
BooleanOptionKey const basic::options::OptionKeys::mp::setup::spans_from_structure
 
StringOptionKey const basic::options::OptionKeys::mp::setup::lipsfile
 
RealVectorOptionKey const basic::options::OptionKeys::mp::setup::center
 
RealVectorOptionKey const basic::options::OptionKeys::mp::setup::normal
 
RealOptionKey const basic::options::OptionKeys::mp::setup::membrane_rsd
 
BooleanOptionKey const basic::options::OptionKeys::mp::setup::transform_into_membrane
 
BooleanOptionKey const basic::options::OptionKeys::mp::setup::position_from_topo
 
BooleanOptionKey const basic::options::OptionKeys::mp::setup::optimize1
 
BooleanOptionKey const basic::options::OptionKeys::mp::setup::optimize2
 
BooleanOptionKey const basic::options::OptionKeys::mp::lipid_acc::lipid_acc
 
RealOptionKey const basic::options::OptionKeys::mp::lipid_acc::angle_cutoff
 
RealOptionKey const basic::options::OptionKeys::mp::lipid_acc::slice_width
 
RealOptionKey const basic::options::OptionKeys::mp::lipid_acc::shell_radius
 
RealOptionKey const basic::options::OptionKeys::mp::lipid_acc::dist_cutoff
 
BooleanOptionKey const basic::options::OptionKeys::mp::lipid_acc::tm_alpha
 
BooleanOptionKey const basic::options::OptionKeys::mp::transform::transform
 
BooleanOptionKey const basic::options::OptionKeys::mp::transform::optimize_embedding
 
BooleanOptionKey const basic::options::OptionKeys::mp::assembly::assembly
 
IntegerOptionKey const basic::options::OptionKeys::mp::assembly::TM_pose_number
 
StringVectorOptionKey const basic::options::OptionKeys::mp::assembly::poses
 
BooleanOptionKey const basic::options::OptionKeys::mp::dock::dock
 
StringOptionKey const basic::options::OptionKeys::mp::dock::weights_cen
 
StringOptionKey const basic::options::OptionKeys::mp::dock::weights_fa
 
BooleanOptionKey const basic::options::OptionKeys::mp::dock::lowres
 
BooleanOptionKey const basic::options::OptionKeys::mp::dock::allow_flips
 
BooleanOptionKey const basic::options::OptionKeys::mp::dock::flexible_bb
 
BooleanOptionKey const basic::options::OptionKeys::mp::dock::flexible_sc
 
RealOptionKey const basic::options::OptionKeys::mp::dock::slide_threshold
 
BooleanOptionKey const basic::options::OptionKeys::mp::quickrelax::quickrelax
 
RealOptionKey const basic::options::OptionKeys::mp::quickrelax::angle_max
 
StringOptionKey const basic::options::OptionKeys::mp::quickrelax::nmoves
 
BooleanOptionKey const basic::options::OptionKeys::mp::quickrelax::repack_again
 
BooleanOptionKey const basic::options::OptionKeys::mp::mutate_relax::mutate_relax
 
StringVectorOptionKey const basic::options::OptionKeys::mp::mutate_relax::mutation
 
StringOptionKey const basic::options::OptionKeys::mp::mutate_relax::mutant_file
 
IntegerOptionKey const basic::options::OptionKeys::mp::mutate_relax::nmodels
 
BooleanOptionKey const basic::options::OptionKeys::mp::mutate_relax::repack_mutation_only
 
RealOptionKey const basic::options::OptionKeys::mp::mutate_relax::repack_radius
 
BooleanOptionKey const basic::options::OptionKeys::mp::mutate_relax::relax
 
BooleanOptionKey const basic::options::OptionKeys::mp::benchmark::benchmark
 
BooleanOptionKey const basic::options::OptionKeys::mp::benchmark::ideal_helix::ideal_helix
 
RealOptionKey const basic::options::OptionKeys::mp::benchmark::ideal_helix::helix_start
 
RealOptionKey const basic::options::OptionKeys::mp::benchmark::ideal_helix::helix_end
 
BooleanOptionKey const basic::options::OptionKeys::mp::benchmark::tilt_angle::tilt_angle
 
StringOptionKey const basic::options::OptionKeys::mp::benchmark::tilt_angle::output
 
BooleanOptionKey const basic::options::OptionKeys::mp::output::output
 
BooleanOptionKey const basic::options::OptionKeys::mp::output::normalize_to_thk
 
BooleanOptionKey const basic::options::OptionKeys::mp::output::output_mem_to_pdb
 

Detailed Description

basic::options::OptionKeys collection

Author
Stuart G. Mentzer (Stuar.nosp@m.t_Me.nosp@m.ntzer.nosp@m.@obj.nosp@m.exx.c.nosp@m.om)
James M. Thompson (tex@u.nosp@m..was.nosp@m.hingt.nosp@m.on.e.nosp@m.du)