Rosetta  2019.47
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mpi_msd.cc File Reference
#include <protocols/pack_daemon/EntityCorrespondence.hh>
#include <protocols/pack_daemon/DynamicAggregateFunction.hh>
#include <protocols/pack_daemon/MultistateAggregateFunction.hh>
#include <protocols/pack_daemon/MultistateFitnessFunction.hh>
#include <protocols/pack_daemon/PackDaemon.hh>
#include <protocols/pack_daemon/util.hh>
#include <devel/init.hh>
#include <core/io/util.hh>
#include <core/io/pdb/pdb_writer.hh>
#include <core/io/StructFileRepOptions.hh>
#include <basic/options/option.hh>
#include <basic/options/option_macros.hh>
#include <basic/MetricValue.hh>
#include <core/chemical/ResidueType.hh>
#include <core/conformation/Residue.hh>
#include <core/pose/Pose.hh>
#include <core/pose/metrics/CalculatorFactory.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/hbonds/HBondOptions.hh>
#include <core/scoring/methods/EnergyMethodOptions.hh>
#include <core/pack/task/PackerTask.hh>
#include <core/pack/interaction_graph/SurfacePotential.hh>
#include <core/import_pose/import_pose.hh>
#include <basic/Tracer.hh>
#include <protocols/genetic_algorithm/Entity.hh>
#include <protocols/genetic_algorithm/EntityRandomizer.hh>
#include <protocols/genetic_algorithm/Mutate1Randomizer.hh>
#include <protocols/genetic_algorithm/GeneticAlgorithm.hh>
#include <protocols/multistate_design/util.hh>
#include <protocols/simple_pose_metric_calculators/NumberHBondsCalculator.hh>
#include <protocols/simple_pose_metric_calculators/BuriedUnsatisfiedPolarsCalculator.hh>
#include <utility/mpi_util.hh>
#include <utility/string_util.hh>
#include <utility/excn/Exceptions.hh>
#include <numeric/numeric.functions.hh>
#include <numeric/random/random.hh>
#include <basic/options/keys/ms.OptionKeys.gen.hh>
#include <utility/vector0.hh>
#include <utility/vector1.hh>
#include <utility/io/izstream.hh>
#include <utility/io/ozstream.hh>

Classes

class  HPatchNPDCalculator
 
class  HPatchNPDCalculatorCreator
 
class  HPatchByChainNPDCalculator
 
class  HPatchByChainNPDCalculatorCreator
 
class  NBuriedUnsatsCalcultor
 
class  NBuriedUnsatsCalcultorCreator
 

Functions

std::string read_native_sequence_for_entity_elements (core::Size n_designed_positions)
 
int main (int argc, char **argv)
 

Variables

static basic::Tracer TR ("apps.public.design.mpi_msd", t_info)
 

Function Documentation

int main ( int  argc,
char **  argv 
)
std::string read_native_sequence_for_entity_elements ( core::Size  n_designed_positions)

Variable Documentation

basic::Tracer TR("apps.public.design.mpi_msd", t_info)
static