Rosetta  2020.37
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Functions
jumps Namespace Reference

Functions

BooleanOptionKey const jumps ("jumps")
 
BooleanOptionKey const evaluate ("jumps:evaluate")
 
FileOptionKey const extra_frags_for_ss ("jumps:extra_frags_for_ss")
 
BooleanOptionKey const fix_chainbreak ("jumps:fix_chainbreak")
 
FileOptionKey const fix_jumps ("jumps:fix_jumps")
 
FileOptionKey const jump_lib ("jumps:jump_lib")
 
FileOptionKey const loop_definition_from_file ("jumps:loop_definition_from_file")
 
BooleanOptionKey const no_chainbreak_in_relax ("jumps:no_chainbreak_in_relax")
 
FileOptionKey const pairing_file ("jumps:pairing_file")
 
IntegerVectorOptionKey const random_sheets ("jumps:random_sheets")
 
FileOptionKey const residue_pair_jump_file ("jumps:residue_pair_jump_file")
 
IntegerVectorOptionKey const sheets ("jumps:sheets")
 
FileOptionKey const topology_file ("jumps:topology_file")
 
BooleanOptionKey const bb_moves ("jumps:bb_moves")
 
BooleanOptionKey const no_wobble ("jumps:no_wobble")
 
BooleanOptionKey const no_shear ("jumps:no_shear")
 
BooleanOptionKey const no_sample_ss_jumps ("jumps:no_sample_ss_jumps")
 
IntegerOptionKey const invrate_jump_move ("jumps:invrate_jump_move")
 
RealOptionKey const chainbreak_weight_stage1 ("jumps:chainbreak_weight_stage1")
 
RealOptionKey const chainbreak_weight_stage2 ("jumps:chainbreak_weight_stage2")
 
RealOptionKey const chainbreak_weight_stage3 ("jumps:chainbreak_weight_stage3")
 
RealOptionKey const chainbreak_weight_stage4 ("jumps:chainbreak_weight_stage4")
 
BooleanOptionKey const ramp_chainbreaks ("jumps:ramp_chainbreaks")
 
RealOptionKey const increase_chainbreak ("jumps:increase_chainbreak")
 
BooleanOptionKey const overlap_chainbreak ("jumps:overlap_chainbreak")
 
RealOptionKey const sep_switch_accelerate ("jumps:sep_switch_accelerate")
 
BooleanOptionKey const dump_frags ("jumps:dump_frags")
 
IntegerOptionKey const njumps ("jumps:njumps")
 
IntegerOptionKey const max_strand_gap_allowed ("jumps:max_strand_gap_allowed")
 
RealOptionKey const contact_score ("jumps:contact_score")
 
BooleanOptionKey const filter_templates ("jumps:filter_templates")
 

Function Documentation

BooleanOptionKey const jumps::bb_moves ( "jumps:bb_moves"  )
RealOptionKey const jumps::chainbreak_weight_stage1 ( "jumps:chainbreak_weight_stage1"  )
RealOptionKey const jumps::chainbreak_weight_stage2 ( "jumps:chainbreak_weight_stage2"  )
RealOptionKey const jumps::chainbreak_weight_stage3 ( "jumps:chainbreak_weight_stage3"  )
RealOptionKey const jumps::chainbreak_weight_stage4 ( "jumps:chainbreak_weight_stage4"  )
RealOptionKey const jumps::contact_score ( "jumps:contact_score"  )
BooleanOptionKey const jumps::dump_frags ( "jumps:dump_frags"  )
BooleanOptionKey const jumps::evaluate ( "jumps:evaluate"  )
FileOptionKey const jumps::extra_frags_for_ss ( "jumps:extra_frags_for_ss"  )
BooleanOptionKey const jumps::filter_templates ( "jumps:filter_templates"  )
BooleanOptionKey const jumps::fix_chainbreak ( "jumps:fix_chainbreak"  )
FileOptionKey const jumps::fix_jumps ( "jumps:fix_jumps"  )
RealOptionKey const jumps::increase_chainbreak ( "jumps:increase_chainbreak"  )
IntegerOptionKey const jumps::invrate_jump_move ( "jumps:invrate_jump_move"  )
FileOptionKey const jumps::jump_lib ( "jumps:jump_lib"  )
BooleanOptionKey const jumps::jumps ( "jumps"  )
FileOptionKey const jumps::loop_definition_from_file ( "jumps:loop_definition_from_file"  )
IntegerOptionKey const jumps::max_strand_gap_allowed ( "jumps:max_strand_gap_allowed"  )
IntegerOptionKey const jumps::njumps ( "jumps:njumps"  )
BooleanOptionKey const jumps::no_chainbreak_in_relax ( "jumps:no_chainbreak_in_relax"  )
BooleanOptionKey const jumps::no_sample_ss_jumps ( "jumps:no_sample_ss_jumps"  )
BooleanOptionKey const jumps::no_shear ( "jumps:no_shear"  )
BooleanOptionKey const jumps::no_wobble ( "jumps:no_wobble"  )
BooleanOptionKey const jumps::overlap_chainbreak ( "jumps:overlap_chainbreak"  )
FileOptionKey const jumps::pairing_file ( "jumps:pairing_file"  )
BooleanOptionKey const jumps::ramp_chainbreaks ( "jumps:ramp_chainbreaks"  )
IntegerVectorOptionKey const jumps::random_sheets ( "jumps:random_sheets"  )
FileOptionKey const jumps::residue_pair_jump_file ( "jumps:residue_pair_jump_file"  )
RealOptionKey const jumps::sep_switch_accelerate ( "jumps:sep_switch_accelerate"  )
IntegerVectorOptionKey const jumps::sheets ( "jumps:sheets"  )
FileOptionKey const jumps::topology_file ( "jumps:topology_file"  )