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corrections.OptionKeys.gen.hh File Reference

basic::options::OptionKeys collection More...

#include <basic/options/keys/OptionKeys.hh>

Namespaces

 basic
 Tags used to tag messeges sent by MPI functions used to decide whether a slave is requesting a new job id or flagging as job as being a bad input.
 
 basic::options
 
 basic::options::OptionKeys
 
 basic::options::OptionKeys::corrections
 
 basic::options::OptionKeys::corrections::score
 
 basic::options::OptionKeys::corrections::chemical
 
 basic::options::OptionKeys::corrections::genpotential
 
 basic::options::OptionKeys::corrections::shapovalov_lib
 
 basic::options::OptionKeys::corrections::water
 

Variables

BooleanOptionKey const basic::options::OptionKeys::corrections::corrections
 
BooleanOptionKey const basic::options::OptionKeys::corrections::beta
 
BooleanOptionKey const basic::options::OptionKeys::corrections::beta_cart
 
BooleanOptionKey const basic::options::OptionKeys::corrections::beta_nov16
 
BooleanOptionKey const basic::options::OptionKeys::corrections::beta_nov16_cart
 
BooleanOptionKey const basic::options::OptionKeys::corrections::beta_july15
 
BooleanOptionKey const basic::options::OptionKeys::corrections::beta_july15_cart
 
BooleanOptionKey const basic::options::OptionKeys::corrections::gen_potential
 
BooleanOptionKey const basic::options::OptionKeys::corrections::newdna
 
BooleanOptionKey const basic::options::OptionKeys::corrections::restore_talaris_behavior
 
BooleanOptionKey const basic::options::OptionKeys::corrections::correct
 
BooleanOptionKey const basic::options::OptionKeys::corrections::hbond_sp2_correction
 
BooleanOptionKey const basic::options::OptionKeys::corrections::facts_default
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::score
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::bbdep_omega
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::bbdep_bond_params
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::bbdep_bond_devs
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::fa_dun_canonicals_use_voronoi
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::fa_dun_noncanonicals_use_voronoi
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::fa_dun_correct_rotamer_well_order
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::fa_dun_correct_achiral_peptoid_libraries
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::no_his_his_pairE
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::no_his_DE_pairE
 
StringOptionKey const basic::options::OptionKeys::corrections::score::p_aa_pp
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::p_aa_pp_nogridshift
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::rama_not_squared
 
FileOptionKey const basic::options::OptionKeys::corrections::score::rama_map
 
FileOptionKey const basic::options::OptionKeys::corrections::score::rama_pp_map
 
FileOptionKey const basic::options::OptionKeys::corrections::score::rama_map_average_L_flat
 
FileOptionKey const basic::options::OptionKeys::corrections::score::rama_map_sym_average_L_flat
 
FileOptionKey const basic::options::OptionKeys::corrections::score::rama_map_sym_gly_flat
 
FileOptionKey const basic::options::OptionKeys::corrections::score::rama_map_sym_pro_flat
 
FileOptionKey const basic::options::OptionKeys::corrections::score::rama_map_average_L_flat_stringent
 
FileOptionKey const basic::options::OptionKeys::corrections::score::rama_map_sym_average_L_flat_stringent
 
FileOptionKey const basic::options::OptionKeys::corrections::score::rama_map_sym_gly_flat_stringent
 
FileOptionKey const basic::options::OptionKeys::corrections::score::rama_map_sym_pro_flat_stringent
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::rama_prepro_steep
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::rama_prepro_nobidentate
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::cenrot
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::dun10
 
StringOptionKey const basic::options::OptionKeys::corrections::score::dun10_dir
 
StringOptionKey const basic::options::OptionKeys::corrections::score::dun02_file
 
StringOptionKey const basic::options::OptionKeys::corrections::score::ch_o_bond_potential
 
RealOptionKey const basic::options::OptionKeys::corrections::score::lj_hbond_hdis
 
RealOptionKey const basic::options::OptionKeys::corrections::score::lj_hbond_OH_donor_dis
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::score12prime
 
RealOptionKey const basic::options::OptionKeys::corrections::score::hbond_energy_shift
 
RealOptionKey const basic::options::OptionKeys::corrections::score::hb_sp2_BAH180_rise
 
RealOptionKey const basic::options::OptionKeys::corrections::score::hb_sp2_outer_width
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::hb_sp2_chipen
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::hbond_measure_sp3acc_BAH_from_hvy
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::hb_fade_energy
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::hb_exclude_ether_oxygens
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::hb_cen_soft
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::use_bicubic_interpolation
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::dun_normsd
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::dun_entropy_correction
 
BooleanOptionKey const basic::options::OptionKeys::corrections::score::no_autogen_cart_improper
 
BooleanOptionKey const basic::options::OptionKeys::corrections::chemical::chemical
 
BooleanOptionKey const basic::options::OptionKeys::corrections::chemical::icoor_05_2009
 
BooleanOptionKey const basic::options::OptionKeys::corrections::chemical::parse_charge
 
BooleanOptionKey const basic::options::OptionKeys::corrections::chemical::expand_st_chi2sampling
 
StringOptionKey const basic::options::OptionKeys::corrections::chemical::alternate_fullatom_ats
 
BooleanOptionKey const basic::options::OptionKeys::corrections::genpotential::genpotential
 
StringVectorOptionKey const basic::options::OptionKeys::corrections::genpotential::set_torsion_params
 
StringVectorOptionKey const basic::options::OptionKeys::corrections::genpotential::set_special_torsion_params
 
BooleanOptionKey const basic::options::OptionKeys::corrections::shapovalov_lib_fixes_enable
 
BooleanOptionKey const basic::options::OptionKeys::corrections::shapovalov_lib::shapovalov_lib
 
BooleanOptionKey const basic::options::OptionKeys::corrections::shapovalov_lib::shap_dun10_enable
 
StringOptionKey const basic::options::OptionKeys::corrections::shapovalov_lib::shap_dun10_smooth_level
 
StringOptionKey const basic::options::OptionKeys::corrections::shapovalov_lib::shap_dun10_dir
 
BooleanOptionKey const basic::options::OptionKeys::corrections::shapovalov_lib::shap_dun10_use_minus_log_P_ignore_P
 
BooleanOptionKey const basic::options::OptionKeys::corrections::shapovalov_lib::shap_rama_enable
 
StringOptionKey const basic::options::OptionKeys::corrections::shapovalov_lib::shap_rama_smooth_level
 
FileOptionKey const basic::options::OptionKeys::corrections::shapovalov_lib::shap_rama_map
 
BooleanOptionKey const basic::options::OptionKeys::corrections::shapovalov_lib::shap_rama_nogridshift
 
BooleanOptionKey const basic::options::OptionKeys::corrections::shapovalov_lib::shap_p_aa_pp_enable
 
StringOptionKey const basic::options::OptionKeys::corrections::shapovalov_lib::shap_p_aa_pp_smooth_level
 
StringOptionKey const basic::options::OptionKeys::corrections::shapovalov_lib::shap_p_aa_pp
 
BooleanOptionKey const basic::options::OptionKeys::corrections::water::water
 
BooleanOptionKey const basic::options::OptionKeys::corrections::water::water_bump_check
 
RealOptionKey const basic::options::OptionKeys::corrections::water::lkb_overlap_distance
 
RealOptionKey const basic::options::OptionKeys::corrections::water::lkb_cluster_radius
 
RealOptionKey const basic::options::OptionKeys::corrections::water::lkb_rotset_radius
 
StringOptionKey const basic::options::OptionKeys::corrections::water::wat_rot_params
 
RealOptionKey const basic::options::OptionKeys::corrections::water::dwell_cutoff
 
RealOptionKey const basic::options::OptionKeys::corrections::water::cluster_radius
 
RealOptionKey const basic::options::OptionKeys::corrections::water::cluster_cutoff
 
RealOptionKey const basic::options::OptionKeys::corrections::water::watlim_scale
 
StringOptionKey const basic::options::OptionKeys::corrections::water::pointwater_params
 
RealOptionKey const basic::options::OptionKeys::corrections::water::ordered_pt_wat_penalty
 
RealOptionKey const basic::options::OptionKeys::corrections::water::pointwat_wat_bonus
 
RealOptionKey const basic::options::OptionKeys::corrections::water::pointwat_wat_bonus_width
 
RealOptionKey const basic::options::OptionKeys::corrections::water::ordered_wat_penalty
 
RealOptionKey const basic::options::OptionKeys::corrections::water::wat_rot_sampling
 
BooleanOptionKey const basic::options::OptionKeys::corrections::water::wat_axis_sampling
 
RealOptionKey const basic::options::OptionKeys::corrections::water::axis_rot_sampling
 
BooleanOptionKey const basic::options::OptionKeys::corrections::water::include_vrt
 

Detailed Description

basic::options::OptionKeys collection

Author
Stuart G. Mentzer (Stuar.nosp@m.t_Me.nosp@m.ntzer.nosp@m.@obj.nosp@m.exx.c.nosp@m.om)
James M. Thompson (tex@u.nosp@m..was.nosp@m.hingt.nosp@m.on.e.nosp@m.du)