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Namespaces | Functions
full_model Namespace Reference

Namespaces

 rna
 

Functions

BooleanOptionKey const full_model ("full_model")
 
StringOptionKey const global_seq_file ("full_model:global_seq_file")
 
ResidueChainVectorOptionKey const cutpoint_open ("full_model:cutpoint_open")
 
ResidueChainVectorOptionKey const cutpoint_closed ("full_model:cutpoint_closed")
 
ResidueChainVectorOptionKey const cyclize ("full_model:cyclize")
 
ResidueChainVectorOptionKey const twoprime ("full_model:twoprime")
 
ResidueChainVectorOptionKey const fiveprime_cap ("full_model:fiveprime_cap")
 
StringVectorOptionKey const other_poses ("full_model:other_poses")
 
ResidueChainVectorOptionKey const jump_res ("full_model:jump_res")
 
ResidueChainVectorOptionKey const disulfide_res ("full_model:disulfide_res")
 
ResidueChainVectorOptionKey const extra_min_res ("full_model:extra_min_res")
 
ResidueChainVectorOptionKey const extra_min_jump_res ("full_model:extra_min_jump_res")
 
ResidueChainVectorOptionKey const root_res ("full_model:root_res")
 
ResidueChainVectorOptionKey const virtual_sugar_res ("full_model:virtual_sugar_res")
 
ResidueChainVectorOptionKey const virtual_res ("full_model:virtual_res")
 
ResidueChainVectorOptionKey const sample_res ("full_model:sample_res")
 
ResidueChainVectorOptionKey const calc_rms_res ("full_model:calc_rms_res")
 
ResidueChainVectorOptionKey const working_res ("full_model:working_res")
 
BooleanOptionKey const motif_mode ("full_model:motif_mode")
 
BooleanOptionKey const allow_jump_in_numbering ("full_model:allow_jump_in_numbering")
 

Function Documentation

BooleanOptionKey const full_model::allow_jump_in_numbering ( "full_model:allow_jump_in_numbering"  )
ResidueChainVectorOptionKey const full_model::calc_rms_res ( "full_model:calc_rms_res"  )
ResidueChainVectorOptionKey const full_model::cutpoint_closed ( "full_model:cutpoint_closed"  )
ResidueChainVectorOptionKey const full_model::cutpoint_open ( "full_model:cutpoint_open"  )

Referenced by main().

ResidueChainVectorOptionKey const full_model::cyclize ( "full_model:cyclize"  )
ResidueChainVectorOptionKey const full_model::disulfide_res ( "full_model:disulfide_res"  )
ResidueChainVectorOptionKey const full_model::extra_min_jump_res ( "full_model:extra_min_jump_res"  )
ResidueChainVectorOptionKey const full_model::extra_min_res ( "full_model:extra_min_res"  )
ResidueChainVectorOptionKey const full_model::fiveprime_cap ( "full_model:fiveprime_cap"  )
BooleanOptionKey const full_model::full_model ( "full_model"  )
StringOptionKey const full_model::global_seq_file ( "full_model:global_seq_file"  )
ResidueChainVectorOptionKey const full_model::jump_res ( "full_model:jump_res"  )
BooleanOptionKey const full_model::motif_mode ( "full_model:motif_mode"  )
StringVectorOptionKey const full_model::other_poses ( "full_model:other_poses"  )
ResidueChainVectorOptionKey const full_model::root_res ( "full_model:root_res"  )
ResidueChainVectorOptionKey const full_model::sample_res ( "full_model:sample_res"  )
ResidueChainVectorOptionKey const full_model::twoprime ( "full_model:twoprime"  )
ResidueChainVectorOptionKey const full_model::virtual_res ( "full_model:virtual_res"  )
ResidueChainVectorOptionKey const full_model::virtual_sugar_res ( "full_model:virtual_sugar_res"  )
ResidueChainVectorOptionKey const full_model::working_res ( "full_model:working_res"  )