Rosetta  2020.37
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Friends Macros Pages
Namespaces | Functions
stepwise::monte_carlo Namespace Reference

Namespaces

 csa
 

Functions

BooleanOptionKey const monte_carlo ("stepwise:monte_carlo")
 
BooleanOptionKey const verbose_scores ("stepwise:monte_carlo:verbose_scores")
 
BooleanOptionKey const skip_deletions ("stepwise:monte_carlo:skip_deletions")
 
BooleanOptionKey const allow_internal_hinge_moves ("stepwise:monte_carlo:allow_internal_hinge_moves")
 
BooleanOptionKey const allow_internal_local_moves ("stepwise:monte_carlo:allow_internal_local_moves")
 
BooleanOptionKey const allow_skip_bulge ("stepwise:monte_carlo:allow_skip_bulge")
 
RealOptionKey const skip_bulge_frequency ("stepwise:monte_carlo:skip_bulge_frequency")
 
RealOptionKey const from_scratch_frequency ("stepwise:monte_carlo:from_scratch_frequency")
 
BooleanOptionKey const allow_split_off ("stepwise:monte_carlo:allow_split_off")
 
IntegerOptionKey const cycles ("stepwise:monte_carlo:cycles")
 
RealOptionKey const temperature ("stepwise:monte_carlo:temperature")
 
RealOptionKey const add_proposal_density_factor ("stepwise:monte_carlo:add_proposal_density_factor")
 
RealOptionKey const add_delete_frequency ("stepwise:monte_carlo:add_delete_frequency")
 
RealOptionKey const docking_frequency ("stepwise:monte_carlo:docking_frequency")
 
RealOptionKey const submotif_frequency ("stepwise:monte_carlo:submotif_frequency")
 
RealOptionKey const intermolecular_frequency ("stepwise:monte_carlo:intermolecular_frequency")
 
RealOptionKey const minimize_single_res_frequency ("stepwise:monte_carlo:minimize_single_res_frequency")
 
BooleanOptionKey const allow_variable_bond_geometry ("stepwise:monte_carlo:allow_variable_bond_geometry")
 
RealOptionKey const switch_focus_frequency ("stepwise:monte_carlo:switch_focus_frequency")
 
RealOptionKey const just_min_after_mutation_frequency ("stepwise:monte_carlo:just_min_after_mutation_frequency")
 
BooleanOptionKey const local_redock_only ("stepwise:monte_carlo:local_redock_only")
 
BooleanOptionKey const make_movie ("stepwise:monte_carlo:make_movie")
 
BooleanOptionKey const recover_low ("stepwise:monte_carlo:recover_low")
 
BooleanOptionKey const use_precomputed_library ("stepwise:monte_carlo:use_precomputed_library")
 
BooleanOptionKey const allow_submotif_split ("stepwise:monte_carlo:allow_submotif_split")
 
BooleanOptionKey const force_submotif_without_intervening_bulge ("stepwise:monte_carlo:force_submotif_without_intervening_bulge")
 
BooleanOptionKey const use_first_jump_for_submotif ("stepwise:monte_carlo:use_first_jump_for_submotif")
 
StringVectorOptionKey const exclude_submotifs ("stepwise:monte_carlo:exclude_submotifs")
 
RealOptionKey const vary_loop_length_frequency ("stepwise:monte_carlo:vary_loop_length_frequency")
 
BooleanOptionKey const designing_with_noncanonicals ("stepwise:monte_carlo:designing_with_noncanonicals")
 
IntegerOptionKey const checkpointing_frequency ("stepwise:monte_carlo:checkpointing_frequency")
 
BooleanOptionKey const continue_until_none_missing ("stepwise:monte_carlo:continue_until_none_missing")
 
FileVectorOptionKey const full_model_constraints ("stepwise:monte_carlo:full_model_constraints")
 

Function Documentation

RealOptionKey const stepwise::monte_carlo::add_delete_frequency ( "stepwise:monte_carlo:add_delete_frequency"  )
RealOptionKey const stepwise::monte_carlo::add_proposal_density_factor ( "stepwise:monte_carlo:add_proposal_density_factor"  )
BooleanOptionKey const stepwise::monte_carlo::allow_internal_hinge_moves ( "stepwise:monte_carlo:allow_internal_hinge_moves"  )
BooleanOptionKey const stepwise::monte_carlo::allow_internal_local_moves ( "stepwise:monte_carlo:allow_internal_local_moves"  )
BooleanOptionKey const stepwise::monte_carlo::allow_skip_bulge ( "stepwise:monte_carlo:allow_skip_bulge"  )
BooleanOptionKey const stepwise::monte_carlo::allow_split_off ( "stepwise:monte_carlo:allow_split_off"  )
BooleanOptionKey const stepwise::monte_carlo::allow_submotif_split ( "stepwise:monte_carlo:allow_submotif_split"  )
BooleanOptionKey const stepwise::monte_carlo::allow_variable_bond_geometry ( "stepwise:monte_carlo:allow_variable_bond_geometry"  )
IntegerOptionKey const stepwise::monte_carlo::checkpointing_frequency ( "stepwise:monte_carlo:checkpointing_frequency"  )
BooleanOptionKey const stepwise::monte_carlo::continue_until_none_missing ( "stepwise:monte_carlo:continue_until_none_missing"  )
IntegerOptionKey const stepwise::monte_carlo::cycles ( "stepwise:monte_carlo:cycles"  )
BooleanOptionKey const stepwise::monte_carlo::designing_with_noncanonicals ( "stepwise:monte_carlo:designing_with_noncanonicals"  )
RealOptionKey const stepwise::monte_carlo::docking_frequency ( "stepwise:monte_carlo:docking_frequency"  )
StringVectorOptionKey const stepwise::monte_carlo::exclude_submotifs ( "stepwise:monte_carlo:exclude_submotifs"  )
BooleanOptionKey const stepwise::monte_carlo::force_submotif_without_intervening_bulge ( "stepwise:monte_carlo:force_submotif_without_intervening_bulge"  )
RealOptionKey const stepwise::monte_carlo::from_scratch_frequency ( "stepwise:monte_carlo:from_scratch_frequency"  )
FileVectorOptionKey const stepwise::monte_carlo::full_model_constraints ( "stepwise:monte_carlo:full_model_constraints"  )
RealOptionKey const stepwise::monte_carlo::intermolecular_frequency ( "stepwise:monte_carlo:intermolecular_frequency"  )
RealOptionKey const stepwise::monte_carlo::just_min_after_mutation_frequency ( "stepwise:monte_carlo:just_min_after_mutation_frequency"  )
BooleanOptionKey const stepwise::monte_carlo::local_redock_only ( "stepwise:monte_carlo:local_redock_only"  )
BooleanOptionKey const stepwise::monte_carlo::make_movie ( "stepwise:monte_carlo:make_movie"  )
RealOptionKey const stepwise::monte_carlo::minimize_single_res_frequency ( "stepwise:monte_carlo:minimize_single_res_frequency"  )
BooleanOptionKey const stepwise::monte_carlo::monte_carlo ( "stepwise:monte_carlo"  )
BooleanOptionKey const stepwise::monte_carlo::recover_low ( "stepwise:monte_carlo:recover_low"  )
RealOptionKey const stepwise::monte_carlo::skip_bulge_frequency ( "stepwise:monte_carlo:skip_bulge_frequency"  )
BooleanOptionKey const stepwise::monte_carlo::skip_deletions ( "stepwise:monte_carlo:skip_deletions"  )
RealOptionKey const stepwise::monte_carlo::submotif_frequency ( "stepwise:monte_carlo:submotif_frequency"  )
RealOptionKey const stepwise::monte_carlo::switch_focus_frequency ( "stepwise:monte_carlo:switch_focus_frequency"  )
RealOptionKey const stepwise::monte_carlo::temperature ( "stepwise:monte_carlo:temperature"  )
BooleanOptionKey const stepwise::monte_carlo::use_first_jump_for_submotif ( "stepwise:monte_carlo:use_first_jump_for_submotif"  )
BooleanOptionKey const stepwise::monte_carlo::use_precomputed_library ( "stepwise:monte_carlo:use_precomputed_library"  )
RealOptionKey const stepwise::monte_carlo::vary_loop_length_frequency ( "stepwise:monte_carlo:vary_loop_length_frequency"  )
BooleanOptionKey const stepwise::monte_carlo::verbose_scores ( "stepwise:monte_carlo:verbose_scores"  )