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docking.OptionKeys.gen.hh File Reference

basic::options::OptionKeys collection More...

#include <basic/options/keys/OptionKeys.hh>

Namespaces

 basic
 Tags used to tag messeges sent by MPI functions used to decide whether a slave is requesting a new job id or flagging as job as being a bad input.
 
 basic::options
 
 basic::options::OptionKeys
 
 basic::options::OptionKeys::docking
 
 basic::options::OptionKeys::docking::ligand
 
 basic::options::OptionKeys::docking::ligand::grid
 

Variables

BooleanOptionKey const basic::options::OptionKeys::docking::kick_relax
 
BooleanOptionKey const basic::options::OptionKeys::docking::docking
 
BooleanOptionKey const basic::options::OptionKeys::docking::view
 
BooleanOptionKey const basic::options::OptionKeys::docking::no_filters
 
StringVectorOptionKey const basic::options::OptionKeys::docking::design_chains
 
FileOptionKey const basic::options::OptionKeys::docking::recover_sidechains
 
StringOptionKey const basic::options::OptionKeys::docking::partners
 
BooleanOptionKey const basic::options::OptionKeys::docking::docking_local_refine
 
BooleanOptionKey const basic::options::OptionKeys::docking::low_res_protocol_only
 
StringOptionKey const basic::options::OptionKeys::docking::docking_low_res_score
 
BooleanOptionKey const basic::options::OptionKeys::docking::randomize1
 
BooleanOptionKey const basic::options::OptionKeys::docking::randomize2
 
BooleanOptionKey const basic::options::OptionKeys::docking::use_ellipsoidal_randomization
 
BooleanOptionKey const basic::options::OptionKeys::docking::spin
 
RealVectorOptionKey const basic::options::OptionKeys::docking::tilt
 
StringOptionKey const basic::options::OptionKeys::docking::tilt1_center
 
StringOptionKey const basic::options::OptionKeys::docking::tilt2_center
 
RealVectorOptionKey const basic::options::OptionKeys::docking::dock_pert
 
RealOptionKey const basic::options::OptionKeys::docking::uniform_trans
 
BooleanOptionKey const basic::options::OptionKeys::docking::center_at_interface
 
IntegerOptionKey const basic::options::OptionKeys::docking::dock_mcm_first_cycles
 
IntegerOptionKey const basic::options::OptionKeys::docking::dock_mcm_second_cycles
 
IntegerOptionKey const basic::options::OptionKeys::docking::docking_centroid_outer_cycles
 
IntegerOptionKey const basic::options::OptionKeys::docking::docking_centroid_inner_cycles
 
BooleanOptionKey const basic::options::OptionKeys::docking::dock_min
 
StringOptionKey const basic::options::OptionKeys::docking::flexible_bb_docking
 
RealOptionKey const basic::options::OptionKeys::docking::flexible_bb_docking_interface_dist
 
StringOptionKey const basic::options::OptionKeys::docking::ensemble1
 
StringOptionKey const basic::options::OptionKeys::docking::ensemble2
 
RealOptionKey const basic::options::OptionKeys::docking::dock_mcm_trans_magnitude
 
RealOptionKey const basic::options::OptionKeys::docking::dock_mcm_rot_magnitude
 
RealOptionKey const basic::options::OptionKeys::docking::minimization_threshold
 
RealOptionKey const basic::options::OptionKeys::docking::temperature
 
IntegerOptionKey const basic::options::OptionKeys::docking::repack_period
 
BooleanOptionKey const basic::options::OptionKeys::docking::extra_rottrial
 
BooleanOptionKey const basic::options::OptionKeys::docking::dock_rtmin
 
BooleanOptionKey const basic::options::OptionKeys::docking::sc_min
 
BooleanOptionKey const basic::options::OptionKeys::docking::norepack1
 
BooleanOptionKey const basic::options::OptionKeys::docking::norepack2
 
IntegerVectorOptionKey const basic::options::OptionKeys::docking::bb_min_res
 
IntegerVectorOptionKey const basic::options::OptionKeys::docking::sc_min_res
 
BooleanOptionKey const basic::options::OptionKeys::docking::dock_ppk
 
IntegerOptionKey const basic::options::OptionKeys::docking::max_repeats
 
RealVectorOptionKey const basic::options::OptionKeys::docking::dock_lowres_filter
 
RealOptionKey const basic::options::OptionKeys::docking::SymDock_lowres_filter
 
IntegerVectorOptionKey const basic::options::OptionKeys::docking::multibody
 
BooleanOptionKey const basic::options::OptionKeys::docking::ignore_default_docking_task
 
StringOptionKey const basic::options::OptionKeys::docking::low_patch
 
StringOptionKey const basic::options::OptionKeys::docking::high_patch
 
StringOptionKey const basic::options::OptionKeys::docking::high_min_patch
 
StringOptionKey const basic::options::OptionKeys::docking::pack_patch
 
BooleanOptionKey const basic::options::OptionKeys::docking::use_legacy_protocol
 
RealOptionKey const basic::options::OptionKeys::docking::docklowres_trans_magnitude
 
RealOptionKey const basic::options::OptionKeys::docking::docklowres_rot_magnitude
 
BooleanOptionKey const basic::options::OptionKeys::docking::enable_pymol_viewer
 
BooleanOptionKey const basic::options::OptionKeys::docking::SymDock_reduce_motif_dock_weights
 
RealOptionKey const basic::options::OptionKeys::docking::SymDock_fa_rep_max
 
RealOptionKey const basic::options::OptionKeys::docking::SymDock_fa_sol_max
 
BooleanOptionKey const basic::options::OptionKeys::docking::ligand::ligand
 
StringOptionKey const basic::options::OptionKeys::docking::ligand::protocol
 
BooleanOptionKey const basic::options::OptionKeys::docking::ligand::soft_rep
 
BooleanOptionKey const basic::options::OptionKeys::docking::ligand::tweak_sxfn
 
BooleanOptionKey const basic::options::OptionKeys::docking::ligand::old_estat
 
BooleanOptionKey const basic::options::OptionKeys::docking::ligand::random_conformer
 
IntegerOptionKey const basic::options::OptionKeys::docking::ligand::improve_orientation
 
BooleanOptionKey const basic::options::OptionKeys::docking::ligand::mutate_same_name3
 
RealOptionKey const basic::options::OptionKeys::docking::ligand::subset_to_keep
 
RealOptionKey const basic::options::OptionKeys::docking::ligand::min_rms
 
IntegerOptionKey const basic::options::OptionKeys::docking::ligand::max_poses
 
BooleanOptionKey const basic::options::OptionKeys::docking::ligand::minimize_ligand
 
RealOptionKey const basic::options::OptionKeys::docking::ligand::harmonic_torsions
 
BooleanOptionKey const basic::options::OptionKeys::docking::ligand::use_ambig_constraints
 
IntegerOptionKey const basic::options::OptionKeys::docking::ligand::shear_moves
 
BooleanOptionKey const basic::options::OptionKeys::docking::ligand::minimize_backbone
 
RealOptionKey const basic::options::OptionKeys::docking::ligand::harmonic_Calphas
 
RealOptionKey const basic::options::OptionKeys::docking::ligand::tether_ligand
 
RealVectorOptionKey const basic::options::OptionKeys::docking::ligand::start_from
 
StringOptionKey const basic::options::OptionKeys::docking::ligand::option_file
 
RealOptionKey const basic::options::OptionKeys::docking::ligand::ligand_ensemble
 
IntegerOptionKey const basic::options::OptionKeys::docking::ligand::iphold_cen_cycles
 
IntegerOptionKey const basic::options::OptionKeys::docking::ligand::iphold_fa_cycles
 
BooleanOptionKey const basic::options::OptionKeys::docking::ligand::grid::grid
 
FileOptionKey const basic::options::OptionKeys::docking::ligand::grid::grid_kin
 
FileOptionKey const basic::options::OptionKeys::docking::ligand::grid::grid_map
 

Detailed Description

basic::options::OptionKeys collection

Author
Stuart G. Mentzer (Stuar.nosp@m.t_Me.nosp@m.ntzer.nosp@m.@obj.nosp@m.exx.c.nosp@m.om)
James M. Thompson (tex@u.nosp@m..was.nosp@m.hingt.nosp@m.on.e.nosp@m.du)