Rosetta  2021.16
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RotamerDots.cc File Reference

RotamerDots classes files - ported from rosetta++. More...

#include <core/pack/interaction_graph/RotamerDots.hh>
#include <core/chemical/AtomType.hh>
#include <core/chemical/AtomTypeSet.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/conformation/Atom.hh>
#include <core/scoring/sasa/util.hh>
#include <basic/Tracer.hh>
#include <core/types.hh>
#include <core/conformation/Residue.hh>
#include <ObjexxFCL/ubyte.hh>
#include <ObjexxFCL/format.hh>
#include <ObjexxFCL/FArray1.hh>
#include <numeric/constants.hh>
#include <numeric/xyzVector.hh>
#include <utility/vector1.hh>
#include <utility/vector1.functions.hh>
#include <utility/thread/threadsafe_creation.hh>
#include <utility/options/BooleanVectorOption.hh>
#include <vector>
#include <iostream>
#include <ObjexxFCL/FArray2D.hh>
#include <boost/algorithm/string/erase.hpp>

Namespaces

 core
 A class for reading in the atom type properties.
 
 core::pack
 
 core::pack::interaction_graph
 

Functions

static basic::Tracer TR_DS ("core.pack.interaction_graph.RotamerDots.DotSphere")
 
static basic::Tracer TR_RD ("core.pack.interaction_graph.RotamerDots.RotamerDots")
 
static basic::Tracer TR_RDC ("core.pack.interaction_graph.RotamerDots.RotamerDotsCache")
 
static basic::Tracer TR_RDRD ("core.pack.interaction_graph.RotamerDots.RotamerDotsRadiusData")
 
bool core::pack::interaction_graph::unpack_ubyte (ObjexxFCL::ubyte const &value, core::Size which_bit)
 
void core::pack::interaction_graph::write_sphere_list_header (std::ostream &ostr, std::string const &color, bool off=false)
 
void core::pack::interaction_graph::write_dot (std::ostream &ostr, core::Vector const &center, core::Real radius, Size const dot_index, std::string const &dot_name)
 
void core::pack::interaction_graph::write_sphere_list_uv1 (std::ostream &ostr, std::string const &label, std::string const &color, core::Vector const &center, core::Real radius, utility::vector1< ObjexxFCL::ubyte > const &dot_masks)
 
void core::pack::interaction_graph::write_sphere_list_farray (std::ostream &ostr, std::string const &label, std::string const &color, core::Vector const &center, core::Real radius, ObjexxFCL::FArray1< ObjexxFCL::ubyte > const &dot_masks)
 
std::ostream & core::pack::interaction_graph::operator<< (std::ostream &os, DotSphere const &ds)
 invokes print on the input DotSphere object More...
 
std::ostream & core::pack::interaction_graph::operator<< (std::ostream &os, RotamerDots const &rd)
 invokes print on the input RotamerDots object More...
 

Detailed Description

RotamerDots classes files - ported from rosetta++.

Author
Andrew Leaver-Fay
Ron Jacak

Function Documentation

static basic::Tracer TR_DS ( "core.pack.interaction_graph.RotamerDots.DotSphere"  )
static
static basic::Tracer TR_RD ( "core.pack.interaction_graph.RotamerDots.RotamerDots"  )
static
static basic::Tracer TR_RDC ( "core.pack.interaction_graph.RotamerDots.RotamerDotsCache"  )
static
static basic::Tracer TR_RDRD ( "core.pack.interaction_graph.RotamerDots.RotamerDotsRadiusData"  )
static