Rosetta  2021.16
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LegacyLoophashAssemblyMover.cc File Reference

Derived from AssemblyMover, this mover generates an assembly and then uses Loophash segments to connect any broken segments resulting from the assembly process. More...

#include <protocols/legacy_sewing/sampling/LegacyLoophashAssemblyMover.hh>
#include <protocols/legacy_sewing/sampling/LegacyLoophashAssemblyMoverCreator.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/chemical/VariantType.hh>
#include <core/conformation/Residue.hh>
#include <core/conformation/ResidueFactory.hh>
#include <core/conformation/util.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/scoring/rms_util.hh>
#include <core/scoring/constraints/ConstraintSet.hh>
#include <core/scoring/Energies.hh>
#include <core/pose/util.hh>
#include <protocols/loops/Loops.hh>
#include <protocols/loops/Loop.hh>
#include <protocols/loops/util.hh>
#include <protocols/analysis/LoopAnalyzerMover.hh>
#include <protocols/minimization_packing/MinMover.hh>
#include <protocols/loophash/LoopHashLibrary.hh>
#include <protocols/loophash/LoopHashMap.hh>
#include <protocols/loophash/LocalInserter.hh>
#include <protocols/sic_dock/loophash_util.hh>
#include <protocols/relax/AtomCoordinateCstMover.hh>
#include <protocols/jd2/util.hh>
#include <basic/Tracer.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/lh.OptionKeys.gen.hh>
#include <basic/options/keys/legacy_sewing.OptionKeys.gen.hh>
#include <numeric/random/random.hh>
#include <numeric/random/random_permutation.hh>
#include <utility/string_util.hh>
#include <utility/tag/Tag.hh>

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::legacy_sewing
 

Functions

static basic::Tracer protocols::legacy_sewing::TR ("protocols.legacy_sewing.LegacyLoophashAssemblyMover")
 

Detailed Description

Derived from AssemblyMover, this mover generates an assembly and then uses Loophash segments to connect any broken segments resulting from the assembly process.

Author
Tim Jacobs