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protocols::indexed_structure_store::FragmentLookup Member List

This is the complete list of members for protocols::indexed_structure_store::FragmentLookup, including all inherited members.

fragment_specification()protocols::indexed_structure_store::FragmentLookupinline
FragmentLookup(FragmentStoreOP store)protocols::indexed_structure_store::FragmentLookup
get_fragment_residue_spans(core::pose::Pose const &target_pose)protocols::indexed_structure_store::FragmentLookupprotected
lookup_protocols::indexed_structure_store::FragmentLookupprivate
lookup_close_fragments(xyzVectorIterator input, numeric::Real rms_threshold)protocols::indexed_structure_store::FragmentLookupinline
lookup_close_fragments_v(std::vector< numeric::xyzVector< numeric::Real > > &query_coordinates, numeric::Real rms_threshold, numeric::Size max_matches=99999999)protocols::indexed_structure_store::FragmentLookupprotected
lookup_closest_fragment(xyzVectorIterator input)protocols::indexed_structure_store::FragmentLookupinline
lookup_closest_fragment_subset(xyzVectorIterator input, std::vector< bool > subset)protocols::indexed_structure_store::FragmentLookupinline
lookup_closest_fragment_subset_v(std::vector< numeric::xyzVector< numeric::Real > > &query_coordinates, std::vector< bool > subset)protocols::indexed_structure_store::FragmentLookupprotected
lookup_closest_fragment_v(std::vector< numeric::xyzVector< numeric::Real > > &query_coordinates)protocols::indexed_structure_store::FragmentLookupprotected
lookup_closest_pose_fragments(core::pose::Pose const &pose, FragmentLookupOutputIterator result_out, ResidueNumberOutputIterator fragment_start_out)protocols::indexed_structure_store::FragmentLookupinline
lookup_fragment(xyzVectorIterator input)protocols::indexed_structure_store::FragmentLookupinline
lookup_fragment_v(std::vector< numeric::xyzVector< numeric::Real > > &query_coordinates)protocols::indexed_structure_store::FragmentLookupprotected
lookup_pose_fragments(core::pose::Pose const &pose, FragmentLookupOutputIterator result_out, ResidueNumberOutputIterator fragment_start_out)protocols::indexed_structure_store::FragmentLookupinline
ResidueSpan typedefprotocols::indexed_structure_store::FragmentLookupprotected
store()protocols::indexed_structure_store::FragmentLookupinline
store_protocols::indexed_structure_store::FragmentLookupprivate