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RNA_VDW_BinChecker.cc File Reference

Very fast version of VWD repulsion screening. More...

#include <protocols/stepwise/modeler/rna/StepWiseRNA_Classes.hh>
#include <protocols/stepwise/modeler/rna/util.hh>
#include <protocols/stepwise/modeler/util.hh>
#include <protocols/stepwise/modeler/align/util.hh>
#include <protocols/stepwise/modeler/output_util.hh>
#include <protocols/stepwise/modeler/working_parameters/StepWiseWorkingParameters.hh>
#include <protocols/stepwise/modeler/rna/checker/RNA_VDW_BinChecker.hh>
#include <protocols/stepwise/modeler/rna/rigid_body/util.hh>
#include <protocols/toolbox/rigid_body/util.hh>
#include <core/types.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/chemical/util.hh>
#include <core/chemical/VariantType.hh>
#include <core/chemical/AtomType.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/chemical/rna/util.hh>
#include <core/conformation/Residue.hh>
#include <core/conformation/ResidueFactory.hh>
#include <core/pose/Pose.hh>
#include <core/pose/util.hh>
#include <core/pose/full_model_info/FullModelInfo.hh>
#include <core/pose/PDBInfo.hh>
#include <core/import_pose/import_pose.hh>
#include <core/scoring/rms_util.tmpl.hh>
#include <core/pose/rna/VDW_RepScreenInfo.hh>
#include <protocols/scoring/VDW_CachedRepScreenInfo.hh>
#include <core/pose/rna/VDW_Grid.hh>
#include <core/pose/rna/util.hh>
#include <core/id/AtomID_Map.hh>
#include <core/kinematics/MoveMap.hh>
#include <numeric/conversions.hh>
#include <utility/tools/make_vector1.hh>
#include <utility/numbers.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/OptionKeys.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/stepwise.OptionKeys.gen.hh>
#include <basic/options/keys/rna.OptionKeys.gen.hh>
#include <basic/Tracer.hh>
#include <iostream>
#include <fstream>
#include <sstream>
#include <ObjexxFCL/format.hh>
#include <set>
#include <ctime>

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::stepwise
 
 protocols::stepwise::modeler
 
 protocols::stepwise::modeler::rna
 
 protocols::stepwise::modeler::rna::checker
 

Functions

static basic::Tracer TR ("protocols.stepwise.modeler.rna.checker.RNA_VDW_BinChecker")
 

Detailed Description

Very fast version of VWD repulsion screening.

Author
Parin Sripakdeevong

Function Documentation

static basic::Tracer TR ( "protocols.stepwise.modeler.rna.checker.RNA_VDW_BinChecker"  )
static