Rosetta  2021.16
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Namespaces | Functions
util.cc File Reference
#include <protocols/stepwise/legacy/modeler/protein/util.hh>
#include <protocols/stepwise/modeler/protein/util.hh>
#include <core/io/silent/util.hh>
#include <protocols/stepwise/modeler/util.hh>
#include <core/fragment/Frame.hh>
#include <core/types.hh>
#include <core/io/silent/BinarySilentStruct.hh>
#include <core/io/silent/SilentFileData.hh>
#include <core/io/silent/SilentFileOptions.hh>
#include <core/id/NamedAtomID.hh>
#include <core/id/AtomID.hh>
#include <core/id/AtomID_Map.hh>
#include <core/pose/Pose.hh>
#include <core/pose/full_model_info/util.hh>
#include <core/pose/util.hh>
#include <core/scoring/rms_util.hh>
#include <numeric/angle.functions.hh>
#include <numeric/xyz.functions.hh>
#include <numeric/conversions.hh>
#include <ObjexxFCL/format.hh>
#include <string>
#include <utility/vector1.hh>
#include <utility/tools/make_vector1.hh>
#include <utility/numbers.hh>
#include <basic/Tracer.hh>

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::stepwise
 
 protocols::stepwise::legacy
 
 protocols::stepwise::legacy::modeler
 
 protocols::stepwise::legacy::modeler::protein
 

Functions

static basic::Tracer TR ("protocols.stepwise.legacy.modeler.protein.util")
 
utility::vector1< core::Size >
const 
protocols::stepwise::legacy::modeler::protein::convert_to_working_res (utility::vector1< core::Size > const &res_vector, utility::vector1< core::Size > const &working_res)
 
void protocols::stepwise::legacy::modeler::protein::output_pose_list (utility::vector1< core::pose::PoseOP > pose_list, core::pose::PoseCOP native_pose, std::string const &silent_file, utility::vector1< core::Size > const &working_calc_rms_res, bool const overwrite)
 
void protocols::stepwise::legacy::modeler::protein::output_silent_struct (core::pose::Pose const &pose, core::pose::PoseCOP const &native_pose_op, std::string const &silent_file, std::string const &tag, core::io::silent::SilentFileDataOP sfd_in)
 
void protocols::stepwise::legacy::modeler::protein::output_silent_struct (core::pose::Pose const &pose, core::pose::PoseCOP const &native_pose_op, std::string const &silent_file, std::string const &tag, core::io::silent::SilentFileDataOP sfd_in, utility::vector1< core::Size > const &calc_rms_res)
 
Real protocols::stepwise::legacy::modeler::protein::get_pretend_psi_explicit (core::pose::Pose const &pose, core::Size const &res)
 
Real protocols::stepwise::legacy::modeler::protein::get_pretend_phi_explicit (core::pose::Pose const &pose, core::Size const &res)
 
bool protocols::stepwise::legacy::modeler::protein::is_close_chain_break (core::pose::Pose const &pose)
 

Function Documentation

static basic::Tracer TR ( "protocols.stepwise.legacy.modeler.protein.util"  )
static