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protocols::fold_from_loops::movers Namespace Reference

Classes

class  AlignByResidueSelectorMover
 Adds constraints generated by ConstraintGenerators to a pose. More...
 
class  AlignByResidueSelectorMoverCreator
 
class  DisplayPoseLabelsMover
 Adds constraints generated by ConstraintGenerators to a pose. More...
 
class  DisplayPoseLabelsMoverCreator
 
class  LabelPoseFromResidueSelectorMover
 Adds constraints generated by ConstraintGenerators to a pose. More...
 
class  LabelPoseFromResidueSelectorMoverCreator
 
class  MoveMapFactoryToNamedMoveMapMover
 Adds constraints generated by ConstraintGenerators to a pose. More...
 
class  MoveMapFactoryToNamedMoveMapMoverCreator
 
class  NubInitioLoopClosureMover
 Adds constraints generated by ConstraintGenerators to a pose. More...
 
class  NubInitioLoopClosureMoverCreator
 
class  ReleaseConstraintFromResidueMover
 Adds constraints generated by ConstraintGenerators to a pose. More...
 
class  ReleaseConstraintFromResidueMoverCreator
 
class  ResidueLabelsToPymolSelectionMover
 Adds constraints generated by ConstraintGenerators to a pose. More...
 
class  ResidueLabelsToPymolSelectionMoverCreator
 
class  SavePDBInfoMover
 Adds constraints generated by ConstraintGenerators to a pose. More...
 
class  SavePDBInfoMoverCreator
 
class  SplitAndMixPoseMover
 
class  SplitAndMixPoseMoverCreator
 RosettaScripts factory for NubInitio. More...
 

Typedefs

typedef
utility::pointer::shared_ptr
< AlignByResidueSelectorMover
AlignByResidueSelectorMoverOP
 
typedef
utility::pointer::shared_ptr
< AlignByResidueSelectorMover
const > 
AlignByResidueSelectorMoverCOP
 
typedef
utility::pointer::shared_ptr
< DisplayPoseLabelsMover
DisplayPoseLabelsMoverOP
 
typedef
utility::pointer::shared_ptr
< DisplayPoseLabelsMover const > 
DisplayPoseLabelsMoverCOP
 
typedef
utility::pointer::shared_ptr
< LabelPoseFromResidueSelectorMover
LabelPoseFromResidueSelectorMoverOP
 
typedef
utility::pointer::shared_ptr
< LabelPoseFromResidueSelectorMover
const > 
LabelPoseFromResidueSelectorMoverCOP
 
typedef
utility::pointer::shared_ptr
< MoveMapFactoryToNamedMoveMapMover
MoveMapFactoryToNamedMoveMapMoverOP
 
typedef
utility::pointer::shared_ptr
< MoveMapFactoryToNamedMoveMapMover
const > 
MoveMapFactoryToNamedMoveMapMoverCOP
 
typedef
utility::pointer::shared_ptr
< NubInitioLoopClosureMover
NubInitioLoopClosureMoverOP
 
typedef
utility::pointer::shared_ptr
< NubInitioLoopClosureMover
const > 
NubInitioLoopClosureMoverCOP
 
typedef
utility::pointer::shared_ptr
< ReleaseConstraintFromResidueMover
ReleaseConstraintFromResidueMoverOP
 
typedef
utility::pointer::shared_ptr
< ReleaseConstraintFromResidueMover
const > 
ReleaseConstraintFromResidueMoverCOP
 
typedef
utility::pointer::shared_ptr
< ResidueLabelsToPymolSelectionMover
ResidueLabelsToPymolSelectionMoverOP
 
typedef
utility::pointer::shared_ptr
< ResidueLabelsToPymolSelectionMover
const > 
ResidueLabelsToPymolSelectionMoverCOP
 
typedef
utility::pointer::shared_ptr
< SavePDBInfoMover
SavePDBInfoMoverOP
 
typedef
utility::pointer::shared_ptr
< SavePDBInfoMover const > 
SavePDBInfoMoverCOP
 
typedef
utility::pointer::shared_ptr
< SplitAndMixPoseMover
SplitAndMixPoseMoverOP
 
typedef
utility::pointer::shared_ptr
< SplitAndMixPoseMover const > 
SplitAndMixPoseMoverCOP
 

Functions

utility::vector1
< numeric::xyzVector
< core::Real > > 
Ca_coord (core::pose::Pose const &pose, core::select::residue_selector::ResidueSubset const &positions)
 
static basic::Tracer TR ("protocols.fold_from_loops.SplitAndMixPoseMover", basic::t_trace)
 

Typedef Documentation

typedef utility::pointer::shared_ptr< SavePDBInfoMover const > protocols::fold_from_loops::movers::SavePDBInfoMoverCOP

Function Documentation

utility::vector1< numeric::xyzVector< core::Real > > protocols::fold_from_loops::movers::Ca_coord ( core::pose::Pose const &  pose,
core::select::residue_selector::ResidueSubset const &  positions 
)
static basic::Tracer protocols::fold_from_loops::movers::TR ( "protocols.fold_from_loops.SplitAndMixPoseMover"  ,
basic::t_trace   
)
static

Referenced by protocols::fold_from_loops::movers::SplitAndMixPoseMover::adapt_order_to_pair(), protocols::fold_from_loops::movers::SavePDBInfoMover::apply(), protocols::fold_from_loops::movers::AlignByResidueSelectorMover::apply(), protocols::fold_from_loops::movers::ResidueLabelsToPymolSelectionMover::apply(), protocols::fold_from_loops::movers::LabelPoseFromResidueSelectorMover::apply(), protocols::fold_from_loops::movers::DisplayPoseLabelsMover::apply(), protocols::fold_from_loops::movers::NubInitioLoopClosureMover::apply(), protocols::fold_from_loops::movers::SplitAndMixPoseMover::apply(), protocols::fold_from_loops::movers::NubInitioLoopClosureMover::apply_closure_trust(), protocols::fold_from_loops::movers::LabelPoseFromResidueSelectorMover::apply_no_remarks(), protocols::fold_from_loops::movers::LabelPoseFromResidueSelectorMover::apply_remarks(), protocols::fold_from_loops::movers::SplitAndMixPoseMover::apply_without_merge(), Ca_coord(), protocols::fold_from_loops::movers::SplitAndMixPoseMover::count_segments(), protocols::fold_from_loops::movers::SplitAndMixPoseMover::fill_pair_list(), protocols::fold_from_loops::movers::SplitAndMixPoseMover::fix_ranges(), protocols::fold_from_loops::movers::NubInitioLoopClosureMover::make_final_tree(), protocols::fold_from_loops::movers::SavePDBInfoMover::parse_my_tag(), protocols::fold_from_loops::movers::NubInitioLoopClosureMover::parse_my_tag(), protocols::fold_from_loops::movers::DisplayPoseLabelsMover::print_data(), protocols::fold_from_loops::movers::NubInitioLoopClosureMover::repack(), protocols::fold_from_loops::movers::NubInitioLoopClosureMover::show_cutpoints(), and protocols::fold_from_loops::movers::SplitAndMixPoseMover::split_pose().