Rosetta  2020.50
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protocols::cyclic_peptide::PeptideInternalHbondsMetric Member List

This is the complete list of members for protocols::cyclic_peptide::PeptideInternalHbondsMetric, including all inherited members.

::PeptideInternalHbondsMetricTests classprotocols::cyclic_peptide::PeptideInternalHbondsMetricfriend
apply(std::string const &out_label, pose::Pose &pose, bool override_existing_data=false) const overridecore::simple_metrics::RealMetricvirtual
core::simple_metrics::SimpleMetric::apply(pose::Pose &pose, std::string const &prefix="", std::string const &suffix="", bool override_existing_data=false) const core::simple_metrics::SimpleMetric
backbone_backbone() const protocols::cyclic_peptide::PeptideInternalHbondsMetricinline
backbone_backbone_protocols::cyclic_peptide::PeptideInternalHbondsMetricprivate
backbone_sidechain() const protocols::cyclic_peptide::PeptideInternalHbondsMetricinline
backbone_sidechain_protocols::cyclic_peptide::PeptideInternalHbondsMetricprivate
cached_calculate(pose::Pose const &pose, bool use_cache, std::string prefix="", std::string suffix="", bool fail_on_missing_cache=true) const core::simple_metrics::RealMetric
calculate(core::pose::Pose const &pose) const overrideprotocols::cyclic_peptide::PeptideInternalHbondsMetricvirtual
clone() const overrideprotocols::cyclic_peptide::PeptideInternalHbondsMetricvirtual
complex_type_generator_for_simple_metric(utility::tag::XMLSchemaDefinition &)core::simple_metrics::SimpleMetricstatic
configure_from_filter_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &data)protocols::cyclic_peptide::PeptideInternalHbondsMetric
count_hbonds(core::pose::Pose const &original_pose, core::select::residue_selector::ResidueSubset const &selection) const protocols::cyclic_peptide::PeptideInternalHbondsMetricprivate
exclusion_distance() const protocols::cyclic_peptide::PeptideInternalHbondsMetricinline
exclusion_distance_protocols::cyclic_peptide::PeptideInternalHbondsMetricprivate
generate_allowed_partners(core::pose::Pose const &pose, utility::vector1< core::Size > const &selected_residues) const protocols::cyclic_peptide::PeptideInternalHbondsMetricprivate
get_custom_type() const core::simple_metrics::SimpleMetric
get_final_sm_type() const core::simple_metrics::SimpleMetric
get_metric_names() const overridecore::simple_metrics::RealMetricvirtual
hbond_energy_cutoff() const protocols::cyclic_peptide::PeptideInternalHbondsMetricinline
hbond_energy_cutoff_protocols::cyclic_peptide::PeptideInternalHbondsMetricprivate
metric() const overrideprotocols::cyclic_peptide::PeptideInternalHbondsMetricvirtual
name() const overrideprotocols::cyclic_peptide::PeptideInternalHbondsMetricvirtual
name_static()protocols::cyclic_peptide::PeptideInternalHbondsMetricstatic
operator=(RealMetric const &)core::simple_metrics::RealMetric
core::simple_metrics::SimpleMetric::operator=(SimpleMetric const &)core::simple_metrics::SimpleMetric
parse_base_tag(utility::tag::TagCOP tag)core::simple_metrics::SimpleMetricvirtual
parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &data) overrideprotocols::cyclic_peptide::PeptideInternalHbondsMetricvirtual
PeptideInternalHbondsMetric()=defaultprotocols::cyclic_peptide::PeptideInternalHbondsMetric
PeptideInternalHbondsMetric(PeptideInternalHbondsMetric const &)=defaultprotocols::cyclic_peptide::PeptideInternalHbondsMetric
provide_citation_info(basic::citation_manager::CitationCollectionList &) const overrideprotocols::cyclic_peptide::PeptideInternalHbondsMetricvirtual
provide_shared_xml_schema_elements(utility::tag::AttributeList &attlist)protocols::cyclic_peptide::PeptideInternalHbondsMetricstatic
provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd)protocols::cyclic_peptide::PeptideInternalHbondsMetricstatic
RealMetric()core::simple_metrics::RealMetric
RealMetric(RealMetric const &other)core::simple_metrics::RealMetric
report(std::ostream &outstream, core::pose::Pose const &pose) const protocols::cyclic_peptide::PeptideInternalHbondsMetric
residue_selector() const protocols::cyclic_peptide::PeptideInternalHbondsMetricinline
residue_selector_protocols::cyclic_peptide::PeptideInternalHbondsMetricprivate
scorefxn() const protocols::cyclic_peptide::PeptideInternalHbondsMetricinline
scorefxn_protocols::cyclic_peptide::PeptideInternalHbondsMetricmutableprivate
set_custom_type(std::string const &custom_type)core::simple_metrics::SimpleMetric
set_exclusion_distance(core::Size const setting)protocols::cyclic_peptide::PeptideInternalHbondsMetric
set_hbond_energy_cutoff(core::Real const setting)protocols::cyclic_peptide::PeptideInternalHbondsMetric
set_hbond_types(bool const backbone_backbone_setting, bool const backbone_sidechain_setting, bool const sidechain_sidechain_setting)protocols::cyclic_peptide::PeptideInternalHbondsMetric
set_residue_selector(core::select::residue_selector::ResidueSelectorCOP const &res_selector_in)protocols::cyclic_peptide::PeptideInternalHbondsMetric
set_scorefxn(core::scoring::ScoreFunctionCOP const &sfxn_in)protocols::cyclic_peptide::PeptideInternalHbondsMetric
sidechain_sidechain() const protocols::cyclic_peptide::PeptideInternalHbondsMetricinline
sidechain_sidechain_protocols::cyclic_peptide::PeptideInternalHbondsMetricprivate
simple_metric_type() const core::simple_metrics::SimpleMetricinline
SimpleMetric(std::string const &simple_metric_type)core::simple_metrics::SimpleMetric
SimpleMetric(SimpleMetric const &other)core::simple_metrics::SimpleMetric
~PeptideInternalHbondsMetric() override=defaultprotocols::cyclic_peptide::PeptideInternalHbondsMetric
~RealMetric() overridecore::simple_metrics::RealMetric
~SimpleMetric() overridecore::simple_metrics::SimpleMetric