Rosetta  2020.46
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core::scoring::PoissonBoltzmannPotential Member List

This is the complete list of members for core::scoring::PoissonBoltzmannPotential, including all inherited members.

APBS_CONFIG_EXTcore::scoring::PoissonBoltzmannPotentialstatic
APBS_DX_EXTcore::scoring::PoissonBoltzmannPotentialstatic
apbs_path_core::scoring::PoissonBoltzmannPotentialprivate
APBS_PQR_EXTcore::scoring::PoissonBoltzmannPotentialstatic
c2i_core::scoring::PoissonBoltzmannPotentialprivate
calcenergy_core::scoring::PoissonBoltzmannPotentialprivate
cart2idx(numeric::xyzVector< core::Real > const &cartX, numeric::xyzVector< core::Real > &idxX) const core::scoring::PoissonBoltzmannPotentialinline
cleanup_files() const core::scoring::PoissonBoltzmannPotential
config_filename_core::scoring::PoissonBoltzmannPotentialprivate
DEFAULT_APBS_PATHcore::scoring::PoissonBoltzmannPotentialstatic
dx_filename_core::scoring::PoissonBoltzmannPotentialprivate
eval_PB_energy_residue(core::conformation::Residue const &rsd, Real &PB_energy_residue, Real &PB_energy_backbone, Real &PB_energy_sidechain, Real const &PB_burial_weight) const core::scoring::PoissonBoltzmannPotential
fpath(std::string const &file) const core::scoring::PoissonBoltzmannPotentialprivate
get_potential(numeric::xyzVector< core::Real > const &cartX) const core::scoring::PoissonBoltzmannPotential
grid_spacing_core::scoring::PoissonBoltzmannPotentialprivate
i2c_core::scoring::PoissonBoltzmannPotentialprivate
idx2cart(numeric::xyzVector< Q > const &idxX, numeric::xyzVector< core::Real > &cartX) const core::scoring::PoissonBoltzmannPotentialinline
load_APBS_potential()core::scoring::PoissonBoltzmannPotentialprivate
lower_bound() const core::scoring::PoissonBoltzmannPotentialinline
lower_bound_core::scoring::PoissonBoltzmannPotentialprivate
n_grid_core::scoring::PoissonBoltzmannPotentialprivate
out_of_bounds(numeric::xyzVector< core::Real > const &cartX) const core::scoring::PoissonBoltzmannPotentialinline
PoissonBoltzmannPotential()core::scoring::PoissonBoltzmannPotential
potential_core::scoring::PoissonBoltzmannPotentialprivate
pqr_filename_core::scoring::PoissonBoltzmannPotentialprivate
scratch_dir_core::scoring::PoissonBoltzmannPotentialprivate
solve_pb(core::pose::Pose const &pose, std::string const &state_tag, std::map< std::string, bool > const &is_residue_charged_by_name, bool cleanup_files=false)core::scoring::PoissonBoltzmannPotential
solve_pb(core::pose::Pose const &pose, std::string const &state_tag, id::AtomID_Map< bool > const &charged_atoms, id::AtomID_Map< bool > const &present_atoms, bool cleanup_files=false)core::scoring::PoissonBoltzmannPotential
upper_bound() const core::scoring::PoissonBoltzmannPotentialinline
upper_bound_core::scoring::PoissonBoltzmannPotentialprivate
write_config(core::pose::Pose const &pose, id::AtomID_Map< bool > const &present_atoms) const core::scoring::PoissonBoltzmannPotentialprivate
write_pqr(core::pose::Pose const &pose, id::AtomID_Map< bool > const &charged_atoms, id::AtomID_Map< bool > const &present_atoms) const core::scoring::PoissonBoltzmannPotentialprivate
~PoissonBoltzmannPotential() overridecore::scoring::PoissonBoltzmannPotential