Public Member Functions | Protected Attributes | List of all members
protocols::simple_filters::AbinitioBaseFilter Class Referenceabstract

#include <AbinitioBaseFilter.hh>

Inheritance diagram for protocols::simple_filters::AbinitioBaseFilter:
Inheritance graph

Public Member Functions

 AbinitioBaseFilter ()
 c-tor and d-tor More...
 ~AbinitioBaseFilter () override=default
filters::FilterOP clone () const override=0
filters::FilterOP fresh_instance () const override=0
bool apply (core::pose::Pose const &pose) const override=0
 Returns true if the given pose passes the filter, false otherwise. More...
std::string get_protein_sstype (core::pose::Pose const &pose) const
std::string name () const override
- Public Member Functions inherited from protocols::filters::Filter
 Filter ()
 Filter (std::string const &)
 ~Filter () override
virtual void report (std::ostream &, core::pose::Pose const &) const
virtual core::Real report_sm (core::pose::Pose const &) const
 used to report filter internals through a score or silent file More...
virtual std::string get_type () const
std::string get_user_defined_name () const
void set_user_defined_name (std::string const &name)
virtual void clear ()
 used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual More...
virtual void parse_my_tag (utility::tag::TagCOP, basic::datacache::DataMap &)
 Called by FilterFactory when constructing new Filter. Takes care of the specific mover's parsing. More...
virtual core::Real score (core::pose::Pose &pose)
virtual void provide_citation_info (basic::citation_manager::CitationCollectionList &) const
 Provide citations to the passed CitationCollectionList Subclasses should add the info for themselves and any other classes they use. More...

Protected Attributes

int max_helix_length_
core::Real max_helix_fraction_
int beta_
float beta_ratio_
std::string sstype_
- Protected Attributes inherited from protocols::filters::Filter
std::string scorename_

Constructor & Destructor Documentation

◆ AbinitioBaseFilter()

protocols::simple_filters::AbinitioBaseFilter::AbinitioBaseFilter ( )

c-tor and d-tor

◆ ~AbinitioBaseFilter()

protocols::simple_filters::AbinitioBaseFilter::~AbinitioBaseFilter ( )

Member Function Documentation

◆ apply()

bool protocols::simple_filters::AbinitioBaseFilter::apply ( core::pose::Pose const &  pose) const
overridepure virtual

◆ clone()

filters::FilterOP protocols::simple_filters::AbinitioBaseFilter::clone ( ) const
overridepure virtual

◆ fresh_instance()

filters::FilterOP protocols::simple_filters::AbinitioBaseFilter::fresh_instance ( ) const
overridepure virtual

◆ get_protein_sstype()

std::string protocols::simple_filters::AbinitioBaseFilter::get_protein_sstype ( core::pose::Pose const &  pose) const

◆ name()

std::string protocols::simple_filters::AbinitioBaseFilter::name ( ) const

Member Data Documentation

◆ beta_

int protocols::simple_filters::AbinitioBaseFilter::beta_

◆ beta_ratio_

float protocols::simple_filters::AbinitioBaseFilter::beta_ratio_

◆ max_helix_fraction_

core::Real protocols::simple_filters::AbinitioBaseFilter::max_helix_fraction_

◆ max_helix_length_

int protocols::simple_filters::AbinitioBaseFilter::max_helix_length_

◆ sstype_

std::string protocols::simple_filters::AbinitioBaseFilter::sstype_

The documentation for this class was generated from the following files: