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Classes | Typedefs | Functions
protocols::jd3::pose_outputters Namespace Reference

Classes

class  DeNovoSilentFilePoseOutputter
 The DeNovoSilentFilePoseOutputter. More...
 
class  DeNovoSilentFilePoseOutputterCreator
 
class  mmTFPoseOutputSpecification
 The mmTFPoseOutputSpecification giving all of the details of how to write a Pose out to disk in PDB format. More...
 
class  mmTFPoseOutputter
 The mmTFPoseOutputter. More...
 
class  mmTFPoseOutputterCreator
 
class  PDBPoseOutputSpecification
 The PDBPoseOutputSpecification giving all of the details of how to write a Pose out to disk in PDB format. More...
 
class  PDBPoseOutputter
 The PDBPoseOutputter. More...
 
class  PDBPoseOutputterCreator
 
class  PoseOutputSpecification
 The PoseOutputSpecification. More...
 
class  PoseOutputter
 The PoseOutputter. More...
 
class  PoseOutputterCreator
 
class  PoseOutputterRegistrator
 This templated class will register an instance of an PoseOutputterCreator (class T) with the PoseOutputterFactory. It will ensure that no PoseOutputterCreator is registered twice, and, centralizes this registration logic so that thread safety issues can be handled in one place. More...
 
class  SecondaryPoseOutputterRegistrator
 This templated class will register an instance of an SecondaryPoseOutputterCreator (class T) with the PoseOutputterFactory. It will ensure that no SecondaryPoseOutputterCreator is registered twice, and, centralizes this registration logic so that thread safety issues can be handled in one place. More...
 
class  PoseOutputterFactory
 
class  ScoreFileOutputSpecification
 The ScoreFileOutputSpecification giving all of the details of how to write a Pose out to disk in PDB format. More...
 
class  ScoreFileOutputter
 The ScoreFileOutputter. More...
 
class  ScoreFileOutputterCreator
 
class  SecondaryPoseOutputter
 The SecondaryPoseOutputter. More...
 
class  SecondaryPoseOutputterCreator
 
class  SilentFilePoseOutputSpecification
 The SilentFilePoseOutputSpecification giving all of the details of how to write a Pose out to disk as a silent file. More...
 
class  SilentFilePoseOutputter
 The SilentFilePoseOutputter. More...
 
class  SilentFilePoseOutputterCreator
 

Typedefs

typedef utility::pointer::shared_ptr< DeNovoSilentFilePoseOutputterDeNovoSilentFilePoseOutputterOP
 
typedef utility::pointer::shared_ptr< DeNovoSilentFilePoseOutputter const > DeNovoSilentFilePoseOutputterCOP
 
typedef utility::pointer::shared_ptr< mmTFPoseOutputSpecificationmmTFPoseOutputSpecificationOP
 
typedef utility::pointer::shared_ptr< mmTFPoseOutputSpecification const > mmTFPoseOutputSpecificationCOP
 
typedef utility::pointer::shared_ptr< mmTFPoseOutputtermmTFPoseOutputterOP
 
typedef utility::pointer::shared_ptr< mmTFPoseOutputter const > mmTFPoseOutputterCOP
 
typedef utility::pointer::shared_ptr< PDBPoseOutputSpecificationPDBPoseOutputSpecificationOP
 
typedef utility::pointer::shared_ptr< PDBPoseOutputSpecification const > PDBPoseOutputSpecificationCOP
 
typedef utility::pointer::shared_ptr< PDBPoseOutputterPDBPoseOutputterOP
 
typedef utility::pointer::shared_ptr< PDBPoseOutputter const > PDBPoseOutputterCOP
 
typedef utility::pointer::shared_ptr< PoseOutputSpecificationPoseOutputSpecificationOP
 
typedef utility::pointer::shared_ptr< PoseOutputSpecification const > PoseOutputSpecificationCOP
 
typedef utility::pointer::shared_ptr< PoseOutputterPoseOutputterOP
 
typedef utility::pointer::shared_ptr< PoseOutputter const > PoseOutputterCOP
 
typedef utility::pointer::shared_ptr< PoseOutputterCreatorPoseOutputterCreatorOP
 
typedef utility::pointer::shared_ptr< PoseOutputterCreator const > PoseOutputterCreatorCOP
 
typedef utility::pointer::shared_ptr< ScoreFileOutputSpecificationScoreFileOutputSpecificationOP
 
typedef utility::pointer::shared_ptr< ScoreFileOutputSpecification const > ScoreFileOutputSpecificationCOP
 
typedef utility::pointer::shared_ptr< ScoreFileOutputterScoreFileOutputterOP
 
typedef utility::pointer::shared_ptr< ScoreFileOutputter const > ScoreFileOutputterCOP
 
typedef utility::pointer::shared_ptr< SecondaryPoseOutputterSecondaryPoseOutputterOP
 
typedef utility::pointer::shared_ptr< SecondaryPoseOutputter const > SecondaryPoseOutputterCOP
 
typedef utility::pointer::shared_ptr< SecondaryPoseOutputterCreatorSecondaryPoseOutputterCreatorOP
 
typedef utility::pointer::shared_ptr< SecondaryPoseOutputterCreator const > SecondaryPoseOutputterCreatorCOP
 
typedef utility::pointer::shared_ptr< SilentFilePoseOutputSpecificationSilentFilePoseOutputSpecificationOP
 
typedef utility::pointer::shared_ptr< SilentFilePoseOutputSpecification const > SilentFilePoseOutputSpecificationCOP
 
typedef utility::pointer::shared_ptr< SilentFilePoseOutputterSilentFilePoseOutputterOP
 
typedef utility::pointer::shared_ptr< SilentFilePoseOutputter const > SilentFilePoseOutputterCOP
 

Functions

static basic::Tracer TR ("protocols.jd3.pose_outputters.DeNovoSilentFilePoseOutputter")
 
void pose_outputter_xsd_type_definition_w_attributes (utility::tag::XMLSchemaDefinition &xsd, std::string const &outputter_type, std::string const &description, utility::tag::AttributeList const &attributes)
 Define the XML schema definition for a PoseOutputter that contains no subtags but may contain any number of attributes (aka options). More...
 
static basic::Tracer TR ("protocols.jd3.pose_outputters.PoseOutputterFactory")
 

Typedef Documentation

◆ DeNovoSilentFilePoseOutputterCOP

◆ DeNovoSilentFilePoseOutputterOP

◆ mmTFPoseOutputSpecificationCOP

◆ mmTFPoseOutputSpecificationOP

◆ mmTFPoseOutputterCOP

typedef utility::pointer::shared_ptr< mmTFPoseOutputter const > protocols::jd3::pose_outputters::mmTFPoseOutputterCOP

◆ mmTFPoseOutputterOP

◆ PDBPoseOutputSpecificationCOP

◆ PDBPoseOutputSpecificationOP

◆ PDBPoseOutputterCOP

typedef utility::pointer::shared_ptr< PDBPoseOutputter const > protocols::jd3::pose_outputters::PDBPoseOutputterCOP

◆ PDBPoseOutputterOP

◆ PoseOutputSpecificationCOP

◆ PoseOutputSpecificationOP

◆ PoseOutputterCOP

typedef utility::pointer::shared_ptr< PoseOutputter const > protocols::jd3::pose_outputters::PoseOutputterCOP

◆ PoseOutputterCreatorCOP

◆ PoseOutputterCreatorOP

◆ PoseOutputterOP

typedef utility::pointer::shared_ptr< PoseOutputter > protocols::jd3::pose_outputters::PoseOutputterOP

◆ ScoreFileOutputSpecificationCOP

◆ ScoreFileOutputSpecificationOP

◆ ScoreFileOutputterCOP

typedef utility::pointer::shared_ptr< ScoreFileOutputter const > protocols::jd3::pose_outputters::ScoreFileOutputterCOP

◆ ScoreFileOutputterOP

◆ SecondaryPoseOutputterCOP

◆ SecondaryPoseOutputterCreatorCOP

◆ SecondaryPoseOutputterCreatorOP

◆ SecondaryPoseOutputterOP

◆ SilentFilePoseOutputSpecificationCOP

◆ SilentFilePoseOutputSpecificationOP

◆ SilentFilePoseOutputterCOP

◆ SilentFilePoseOutputterOP

Function Documentation

◆ pose_outputter_xsd_type_definition_w_attributes()

void protocols::jd3::pose_outputters::pose_outputter_xsd_type_definition_w_attributes ( utility::tag::XMLSchemaDefinition &  xsd,
std::string const &  outputter_type,
std::string const &  description,
utility::tag::AttributeList const &  attributes 
)

◆ TR() [1/2]

static basic::Tracer protocols::jd3::pose_outputters::TR ( "protocols.jd3.pose_outputters.DeNovoSilentFilePoseOutputter"  )
static

◆ TR() [2/2]

static basic::Tracer protocols::jd3::pose_outputters::TR ( "protocols.jd3.pose_outputters.PoseOutputterFactory"  )
static