Rosetta  2020.37
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MatchGrafter.cc File Reference

Takes a scaffold protein and a match pdb from RosettaMatch, grafts the match onto the protein. For zinc homodimer design, it can then combine two grafted poses by overlaying the zinc atoms. More...

#include <protocols/metal_interface/MatchGrafter.hh>
#include <protocols/metal_interface/FindClosestAtom.hh>
#include <core/chemical/util.hh>
#include <core/chemical/VariantType.hh>
#include <core/chemical/ResidueConnection.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/chemical/ResidueType.hh>
#include <core/chemical/AtomType.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/conformation/Residue.hh>
#include <core/conformation/ResidueFactory.hh>
#include <core/conformation/Conformation.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/kinematics/Jump.hh>
#include <core/pose/PDBInfo.hh>
#include <core/pose/Pose.hh>
#include <core/pose/variant_util.hh>
#include <core/types.hh>
#include <numeric/xyzVector.hh>
#include <numeric/xyz.io.hh>
#include <utility/vector1.hh>
#include <basic/Tracer.hh>

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::metal_interface
 

Typedefs

using Pose = core::pose::Pose
 
using point = numeric::xyzVector< core::Real >
 

Functions

static basic::Tracer TR ("protocols.metal_interface.MatchGrafter")
 

Detailed Description

Takes a scaffold protein and a match pdb from RosettaMatch, grafts the match onto the protein. For zinc homodimer design, it can then combine two grafted poses by overlaying the zinc atoms.

Author
Bryan Der

Typedef Documentation

using point = numeric::xyzVector<core::Real>

Function Documentation

static basic::Tracer TR ( "protocols.metal_interface.MatchGrafter"  )
static