Rosetta  2021.16
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core::pack::guidance_scoreterms::sap::SapMathConstraint Member List

This is the complete list of members for core::pack::guidance_scoreterms::sap::SapMathConstraint, including all inherited members.

add_constraint(Real weight, std::string const &name)core::pack::guidance_scoreterms::sap::SapMathConstraint
atom(core::Size const ) const overridecore::scoring::aa_composition_energy::SequenceConstraintinlinevirtual
AtomID typedefcore::scoring::constraints::Constraint
choose_effective_sequence_separation(core::kinematics::ShortestPathInFoldTree const &sp, numeric::random::RandomGenerator &)core::scoring::constraints::Constraintvirtual
clone() const overridecore::pack::guidance_scoreterms::sap::SapMathConstraintvirtual
core::scoring::aa_composition_energy::SequenceConstraint::clone(func::FuncOP) const core::scoring::constraints::Constraintvirtual
Constraint(ScoreType const &t)core::scoring::constraints::Constraint
dist(core::scoring::func::XYZ_Func const &) const overridecore::scoring::aa_composition_energy::SequenceConstraintinlinevirtual
core::scoring::constraints::Constraint::dist(core::pose::Pose const &) const core::scoring::constraints::Constraintvirtual
effective_sequence_separation(core::kinematics::ShortestPathInFoldTree const &) const core::scoring::constraints::Constraintvirtual
fill_f1_f2(core::id::AtomID const &, core::scoring::func::XYZ_Func const &, Vector &, Vector &, EnergyMap const &) const overridecore::scoring::aa_composition_energy::SequenceConstraintinlinevirtual
get_func() const core::scoring::constraints::Constraintvirtual
get_math_result(utility::vector1< std::pair< Real, SapConstraintHelperCOP > > const &parsed_helpers) const core::pack::guidance_scoreterms::sap::SapMathConstraint
get_score(utility::vector1< std::pair< Real, SapConstraintHelperCOP > > const &parsed_helpers) const core::pack::guidance_scoreterms::sap::SapMathConstraint
helper_weights_core::pack::guidance_scoreterms::sap::SapMathConstraintprivate
lower_bound(Real lower)core::pack::guidance_scoreterms::sap::SapMathConstraint
lower_bound_core::pack::guidance_scoreterms::sap::SapMathConstraintprivate
natoms() const overridecore::scoring::aa_composition_energy::SequenceConstraintinlinevirtual
operator!=(Constraint const &other) const core::scoring::constraints::Constraint
operator=(SapMathConstraint const &other)core::pack::guidance_scoreterms::sap::SapMathConstraint
operator==(scoring::constraints::Constraint const &) const overridecore::pack::guidance_scoreterms::sap::SapMathConstraintvirtual
parse_helpers(utility::vector1< SapConstraintHelperCOP > const &helpers) const core::pack::guidance_scoreterms::sap::SapMathConstraint
penalty_per_unit(Real penalty)core::pack::guidance_scoreterms::sap::SapMathConstraint
penalty_per_unit_core::pack::guidance_scoreterms::sap::SapMathConstraintprivate
read_constraint(std::istream &, core::pose::Pose const &)core::scoring::constraints::Constraintvirtual
read_data(std::istream &)core::scoring::constraints::Constraintvirtual
read_def(std::istream &, pose::Pose const &, core::scoring::func::FuncFactory const &)core::scoring::constraints::Constraintvirtual
remap_resid(core::id::SequenceMapping const &) const overridecore::pack::guidance_scoreterms::sap::SapMathConstraintinlinevirtual
remapped_clone(pose::Pose const &, pose::Pose const &, id::SequenceMappingCOP map) const core::scoring::constraints::Constraintvirtual
residues() const core::scoring::constraints::Constraintvirtual
same_type_as_me(scoring::constraints::Constraint const &other) const overridecore::pack::guidance_scoreterms::sap::SapMathConstraintvirtual
SapMathConstraint()core::pack::guidance_scoreterms::sap::SapMathConstraint
SapMathConstraint(SapMathConstraint const &src)core::pack::guidance_scoreterms::sap::SapMathConstraint
score(core::scoring::func::XYZ_Func const &, EnergyMap const &, EnergyMap &) const overridecore::scoring::aa_composition_energy::SequenceConstraintinlinevirtual
core::scoring::constraints::Constraint::score(pose::Pose const &pose) const core::scoring::constraints::Constraintvirtual
core::scoring::constraints::Constraint::score(pose::Pose const &pose, EnergyMap const &weights) const core::scoring::constraints::Constraintvirtual
score_type() const core::scoring::constraints::Constraintinline
SequenceConstraint(core::scoring::ScoreType const &t)core::scoring::aa_composition_energy::SequenceConstraint
SequenceConstraint(SequenceConstraint const &src)core::scoring::aa_composition_energy::SequenceConstraint
setup_for_derivatives(core::scoring::func::XYZ_Func const &, ScoreFunction const &) const core::scoring::constraints::Constraintvirtual
setup_for_scoring(core::scoring::func::XYZ_Func const &, ScoreFunction const &) const core::scoring::constraints::Constraintvirtual
show(std::ostream &) const core::scoring::constraints::Constraintvirtual
show_def(std::ostream &, pose::Pose const &) const core::scoring::constraints::Constraintvirtual
show_violations(std::ostream &out, pose::Pose const &, Size, Real threshold=1) const core::scoring::constraints::Constraintvirtual
steal_def(pose::Pose const &)core::scoring::constraints::Constraintvirtual
to_string() const core::scoring::constraints::Constraint
type() const core::scoring::constraints::Constraintvirtual
upper_bound(Real upper)core::pack::guidance_scoreterms::sap::SapMathConstraint
upper_bound_core::pack::guidance_scoreterms::sap::SapMathConstraintprivate
~Constraint() overridecore::scoring::constraints::Constraint
~SapMathConstraint() overridecore::pack::guidance_scoreterms::sap::SapMathConstraint
~SequenceConstraint() overridecore::scoring::aa_composition_energy::SequenceConstraint