Public Member Functions | Static Public Member Functions | Private Types | Private Attributes | List of all members
protocols::matdes::InterfacePackingFilter Class Reference

#include <InterfacePackingFilter.hh>

Inheritance diagram for protocols::matdes::InterfacePackingFilter:
Inheritance graph

Public Member Functions

 InterfacePackingFilter ()
 default ctor More...
bool apply (core::pose::Pose const &pose) const override
 Returns true if the given pose passes the filter, false otherwise. More...
void report (std::ostream &out, core::pose::Pose const &pose) const override
core::Real report_sm (core::pose::Pose const &pose) const override
 used to report filter internals through a score or silent file More...
protocols::filters::FilterOP clone () const override
protocols::filters::FilterOP fresh_instance () const override
core::Real compute (core::pose::Pose const &pose) const
 ~InterfacePackingFilter () override
void parse_my_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &) override
 Called by FilterFactory when constructing new Filter. Takes care of the specific mover's parsing. More...
core::Real distance_cutoff () const
core::Real contact_dist () const
core::Real lower_threshold () const
core::Real upper_threshold () const
bool multicomp () const
std::string sym_dof_names () const
void distance_cutoff (core::Real const d)
void contact_dist (core::Real const c)
void lower_threshold (core::Real const l)
void upper_threshold (core::Real const u)
void sym_dof_names (std::string const s)
void multicomp (bool const multicomp)
std::string name () const override
- Public Member Functions inherited from protocols::filters::Filter
 Filter ()
 Filter (std::string const &)
 ~Filter () override
virtual std::string get_type () const
std::string get_user_defined_name () const
void set_user_defined_name (std::string const &name)
virtual void clear ()
 used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual More...
virtual core::Real score (core::pose::Pose &pose)
virtual void provide_citation_info (basic::citation_manager::CitationCollectionList &) const
 Provide citations to the passed CitationCollectionList Subclasses should add the info for themselves and any other classes they use. More...

Static Public Member Functions

static std::string class_name ()
static void provide_xml_schema (utility::tag::XMLSchemaDefinition &xsd)

Private Types

typedef protocols::filters::Filter parent

Private Attributes

core::Real distance_cutoff_
core::Real contact_dist_
core::Real lower_threshold_
core::Real upper_threshold_
bool multicomp_
std::string sym_dof_names_

Additional Inherited Members

- Protected Attributes inherited from protocols::filters::Filter
std::string scorename_

Member Typedef Documentation

◆ parent

Constructor & Destructor Documentation

◆ InterfacePackingFilter()

protocols::matdes::InterfacePackingFilter::InterfacePackingFilter ( )

default ctor

◆ ~InterfacePackingFilter()

protocols::matdes::InterfacePackingFilter::~InterfacePackingFilter ( )

Member Function Documentation

◆ apply()

bool protocols::matdes::InterfacePackingFilter::apply ( core::pose::Pose const &  pose) const

Returns true if the given pose passes the filter, false otherwise.

Implements protocols::filters::Filter.

References compute(), lower_threshold_, protocols::matdes::TR(), and upper_threshold_.

◆ class_name()

std::string protocols::matdes::InterfacePackingFilter::class_name ( )

◆ clone()

protocols::filters::FilterOP protocols::matdes::InterfacePackingFilter::clone ( ) const

◆ compute()

core::Real protocols::matdes::InterfacePackingFilter::compute ( core::pose::Pose const &  pose) const

◆ contact_dist() [1/2]

core::Real protocols::matdes::InterfacePackingFilter::contact_dist ( ) const

References contact_dist_.

Referenced by parse_my_tag().

◆ contact_dist() [2/2]

void protocols::matdes::InterfacePackingFilter::contact_dist ( core::Real const  c)

References contact_dist_.

◆ distance_cutoff() [1/2]

core::Real protocols::matdes::InterfacePackingFilter::distance_cutoff ( ) const

References distance_cutoff_.

Referenced by parse_my_tag().

◆ distance_cutoff() [2/2]

void protocols::matdes::InterfacePackingFilter::distance_cutoff ( core::Real const  d)

References distance_cutoff_.

◆ fresh_instance()

protocols::filters::FilterOP protocols::matdes::InterfacePackingFilter::fresh_instance ( ) const

◆ lower_threshold() [1/2]

core::Real protocols::matdes::InterfacePackingFilter::lower_threshold ( ) const

References lower_threshold_.

Referenced by parse_my_tag().

◆ lower_threshold() [2/2]

void protocols::matdes::InterfacePackingFilter::lower_threshold ( core::Real const  l)

References lower_threshold_.

◆ multicomp() [1/2]

bool protocols::matdes::InterfacePackingFilter::multicomp ( ) const

References multicomp_.

Referenced by parse_my_tag().

◆ multicomp() [2/2]

void protocols::matdes::InterfacePackingFilter::multicomp ( bool const  multicomp)

References multicomp_.

◆ name()

std::string protocols::matdes::InterfacePackingFilter::name ( ) const

Reimplemented from protocols::filters::Filter.

References class_name().

◆ parse_my_tag()

void protocols::matdes::InterfacePackingFilter::parse_my_tag ( utility::tag::TagCOP  ,

Called by FilterFactory when constructing new Filter. Takes care of the specific mover's parsing.

Reimplemented from protocols::filters::Filter.

References contact_dist(), distance_cutoff(), lower_threshold(), multicomp(), sym_dof_names(), protocols::matdes::TR(), and upper_threshold().

◆ provide_xml_schema()

void protocols::matdes::InterfacePackingFilter::provide_xml_schema ( utility::tag::XMLSchemaDefinition &  xsd)

◆ report()

void protocols::matdes::InterfacePackingFilter::report ( std::ostream &  out,
core::pose::Pose const &  pose 
) const

◆ report_sm()

core::Real protocols::matdes::InterfacePackingFilter::report_sm ( core::pose::Pose const &  ) const

used to report filter internals through a score or silent file

Reimplemented from protocols::filters::Filter.

References compute().

◆ sym_dof_names() [1/2]

std::string protocols::matdes::InterfacePackingFilter::sym_dof_names ( ) const

References sym_dof_names_.

Referenced by parse_my_tag().

◆ sym_dof_names() [2/2]

void protocols::matdes::InterfacePackingFilter::sym_dof_names ( std::string const  s)

References sym_dof_names_.

◆ upper_threshold() [1/2]

core::Real protocols::matdes::InterfacePackingFilter::upper_threshold ( ) const

References upper_threshold_.

Referenced by parse_my_tag().

◆ upper_threshold() [2/2]

void protocols::matdes::InterfacePackingFilter::upper_threshold ( core::Real const  u)

Member Data Documentation

◆ contact_dist_

core::Real protocols::matdes::InterfacePackingFilter::contact_dist_

Referenced by compute(), and contact_dist().

◆ distance_cutoff_

core::Real protocols::matdes::InterfacePackingFilter::distance_cutoff_

Referenced by compute(), and distance_cutoff().

◆ lower_threshold_

core::Real protocols::matdes::InterfacePackingFilter::lower_threshold_

Referenced by apply(), and lower_threshold().

◆ multicomp_

bool protocols::matdes::InterfacePackingFilter::multicomp_

Referenced by compute(), and multicomp().

◆ sym_dof_names_

std::string protocols::matdes::InterfacePackingFilter::sym_dof_names_

Referenced by compute(), and sym_dof_names().

◆ upper_threshold_

core::Real protocols::matdes::InterfacePackingFilter::upper_threshold_

Referenced by apply(), and upper_threshold().

The documentation for this class was generated from the following files: