protocols::pose_reporters::RMSDReporter Class Reference

Report the RMSD between two poses. More...

#include <BasicPosePropertyReporters.hh>

Inheritance diagram for protocols::pose_reporters::RMSDReporter:

Public Member Functions
	RMSDReporter ()
std::string	get_name () const override
	Each derived selector must specify its name. More...
core::Real	report_property (core::pose::Pose &p1, core::pose::Pose &p2) const override
	Report the RMSD between poses p1 and p2 Depending on the mode, this can be either all atom or CA RMSD, optionally with residue selection. More...
void	parse_my_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &data) override
	Called by PosePropertyReporterFactory when constructing new PosePropertyReporters. Takes care of the specific selector's parsing. More...
Public Member Functions inherited from protocols::rosetta_scripts::PosePropertyReporter
virtual core::Real	report_property (core::pose::Pose &p) const
	Reports a specific property for the provided pose. More...

Static Public Member Functions
static std::string	name ()
static void	provide_xml_schema (utility::tag::XMLSchemaDefinition &xsd)
Static Public Member Functions inherited from protocols::rosetta_scripts::PosePropertyReporter
static std::string	name ()

Private Types
enum	{ MODE_NONE , MODE_CA_rmsd , MODE_all_atom_rmsd }

Private Attributes
core::Size	mode_
core::select::residue_selector::ResidueSelectorCOP	residues_

Additional Inherited Members
Protected Member Functions inherited from protocols::rosetta_scripts::PosePropertyReporter
	PosePropertyReporter ()
	~PosePropertyReporter () override

Detailed Description

Report the RMSD between two poses.

Member Enumeration Documentation

anonymous enum

anonymous enum

private

Enumerator
MODE_NONE
MODE_CA_rmsd
MODE_all_atom_rmsd

Constructor & Destructor Documentation

RMSDReporter()

protocols::pose_reporters::RMSDReporter::RMSDReporter

(

)

Member Function Documentation

get_name()

std::string protocols::pose_reporters::RMSDReporter::get_name ( ) const

inlineoverridevirtual

Each derived selector must specify its name.

Implements protocols::rosetta_scripts::PosePropertyReporter.

References name().

name()

static std::string protocols::pose_reporters::RMSDReporter::name ( )

inlinestatic

Referenced by get_name(), and provide_xml_schema().

parse_my_tag()

void protocols::pose_reporters::RMSDReporter::parse_my_tag ( utility::tag::TagCOP  tag, basic::datacache::DataMap &  data  )

overridevirtual

Called by PosePropertyReporterFactory when constructing new PosePropertyReporters. Takes care of the specific selector's parsing.

Reimplemented from protocols::rosetta_scripts::PosePropertyReporter.

References core::pose::get_resnum_selector(), mode_, MODE_all_atom_rmsd, MODE_CA_rmsd, MODE_NONE, and residues_.

provide_xml_schema()

void protocols::pose_reporters::RMSDReporter::provide_xml_schema ( utility::tag::XMLSchemaDefinition &  xsd )

static

References core::pose::attributes_for_get_resnum_selector(), protocols::rosetta_scripts::PosePropertyReporterFactory::complex_type_name_for_pose_reporter(), and name().

Referenced by protocols::pose_reporters::RMSDReporterCreator::provide_xml_schema().

report_property()

core::Real protocols::pose_reporters::RMSDReporter::report_property ( core::pose::Pose &  p1, core::pose::Pose &  p2  ) const

overridevirtual

Report the RMSD between poses p1 and p2 Depending on the mode, this can be either all atom or CA RMSD, optionally with residue selection.

Reimplemented from protocols::rosetta_scripts::PosePropertyReporter.

References core::scoring::all_atom_rmsd(), core::scoring::CA_rmsd(), core::select::get_residues_from_subset(), mode_, MODE_all_atom_rmsd, MODE_CA_rmsd, residues_, core::pose::Pose::sequence(), and protocols::TR().

Member Data Documentation

mode_

core::Size protocols::pose_reporters::RMSDReporter::mode_

private

Referenced by parse_my_tag(), and report_property().

residues_

core::select::residue_selector::ResidueSelectorCOP protocols::pose_reporters::RMSDReporter::residues_

private

Referenced by parse_my_tag(), and report_property().

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The documentation for this class was generated from the following files:

• src/protocols/pose_reporters/BasicPosePropertyReporters.hh
• src/protocols/pose_reporters/BasicPosePropertyReporters.cc