Rosetta
Classes | Functions | Variables
core::init Namespace Reference

Classes

struct  pre_talaris_2013_behavior_settings
 

Functions

static basic::Tracer TR ("core.init")
 
void init_mpi (int, char **)
 
void init_options (int argc, char *argv[])
 Initialize the option system, which manages command line options. More...
 
void init_crash_reporter (int argc, char *argv[])
 Setup crash reporter. More...
 
void init_complex_options ()
 After the tracers have been initialized, now go back and modify some of the values in the options system based on (hard coded) inter-flag relationships. Some of these relationships are set in the basic::options::process() function, some of them are handled in this .cc file. More...
 
void init_tracers ()
 Tracers control output to std::cout and std::cerr. More...
 
void init_source_revision ()
 Choose to output source version control information? More...
 
void init_paths ()
 Setup basic search paths. More...
 
void check_deprecated_flags ()
 Check for deprecated flags specified by the user and output error messages if necessary. More...
 
void report_application_command (int argc, char *argv[])
 Describe the application execution command. More...
 
void random_delay ()
 Choose to randomly delay execution to desyncronize parallel execution. More...
 
void locate_rosetta_database ()
 Locate rosetta_database. More...
 
void check_load_fconfig ()
 Check if common config file exists and load it/them as flags files. More...
 
void init_profiling ()
 Profiling measures execution performance. More...
 
void init_resources ()
 Set up system resources. More...
 
void init (int argc, char *argv[])
 Init basic core systems: options system, random system. More...
 
void init (utility::vector1< std::string > const &args)
 wrapper for core system Init More...
 
void init_mpi (int argc, char *argv[])
 Initialize MPI (message passing interface) for parallel applications. More...
 
static basic::Tracer TR ("core.init.score_function_corrections")
 
void init_score_function_corrections (utility::options::OptionCollection &options)
 Initialize the latest and greatest score function parameters. More...
 
void init_revert_to_pre_talaris_2013_mistake (utility::options::OptionCollection &options)
 Initialize the "revert to before Talaris2013" mistake. More...
 
void revert_to_pre_talaris_2013_defaults (utility::options::OptionCollection &options)
 Reset a set of flags to their pre-talaris behavior. More...
 
void init_pre_beta_nov15_etable (utility::options::OptionCollection &options)
 Initialize the -pre_beta_nov15 etable. More...
 
void init_revert_to_talaris (utility::options::OptionCollection &options)
 Initialize the revert-to-Talaris2014. More...
 
void init_hbond_sp2_correction (utility::options::OptionCollection &options)
 Initialize the hbond Sp2 correction Deprecated as Talaris2013 becomes default. More...
 
void init_facts_correction (utility::options::OptionCollection &options)
 Initialize the FACTS correction. More...
 
void init_correct_correction (utility::options::OptionCollection &options)
 Initialize the -correct correction. More...
 
void init_shapovalov_lib_fixes_enable_correction (utility::options::OptionCollection &options)
 Initialize the -shapovalov_lib_fixes_enable correction. More...
 
void init_crystal_refinement_correction (utility::options::OptionCollection &options)
 Initialize the crystal refinement correction. More...
 
void init_beta_correction (utility::options::OptionCollection &options)
 Initialize the most recent beta score function (-beta) More...
 
void init_beta_july15_correction (utility::options::OptionCollection &options)
 Initialize the -beta_july15 score function. More...
 
void init_beta_nov16_correction (utility::options::OptionCollection &options, bool setweight=true)
 Initialize the -beta_nov16 score function. More...
 
void init_nonideal_correction (utility::options::OptionCollection &options)
 Initialize nonideal bond geometry correction. More...
 
void init_restore_score12prime (utility::options::OptionCollection &options)
 restore the the score function to the Score12prime version More...
 
void init_spades_score_function_correction (utility::options::OptionCollection &options)
 Alter the water/water and water/non-water solvation potential if the score:water_hybrid_sf flag is on the command line. More...
 
void init_gen_potential_settings (utility::options::OptionCollection &options)
 Initialize new atom types for Rosetta generic potential. More...
 
void init_dna_correction (utility::options::OptionCollection &options)
 Apply some DNA-specific mods that are still in testing phase; only if -corrections::newdna present. More...
 

Variables

static EnergyMethodRegistrator< energy_methods::AARepeatEnergyCreatorAARepeatEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::AACompositionEnergyCreatorAACompositionEnergyCreator_registrator
 
static EnergyMethodRegistrator< pack::guidance_scoreterms::approximate_buried_unsat_penalty::ApproximateBuriedUnsatPenaltyCreatorApproximateBuriedUnsatPenaltyCreator_registrator
 
static EnergyMethodRegistrator< scoring::constraints::ConstraintsEnergyCreatorConstraintsEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods ::CentroidDisulfideEnergyCreator > CentroidDisulfideEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::DisulfideMatchingEnergyCreatorDisulfideMatchingEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::FullatomDisulfideEnergyCreatorFullatomDisulfideEnergyCreator_registrator
 
static EnergyMethodRegistrator< scoring::etable::EtableEnergyCreatorEtableEnergyCreator_registrator
 
static EnergyMethodRegistrator< scoring::etable::EtableClassicIntraEnergyCreatorEtableClassicIntraEnergyCreator_registrator
 
static EnergyMethodRegistrator< pack::guidance_scoreterms::hbnet_energy::HBNetEnergyCreatorHBNetEnergyCreator_registrator
 
static EnergyMethodRegistrator< scoring::hbonds::HBondEnergyCreatorHBondEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::MHCEpitopeEnergyCreatorMHCEpitopeEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::NPDHBondEnergyCreatorNPDHBondEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::ArgCationPiEnergyCreatorArgCationPiEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::AspartimidePenaltyEnergyCreatorAspartimidePenaltyEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::ChainbreakEnergyCreatorChainbreakEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::BranchEnergyCreatorBranchEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::CenPairEnergyCreatorCenPairEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::CenPairMotifEnergyCreatorCenPairMotifEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::CenPairMotifDegreeEnergyCreatorCenPairMotifDegreeEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::ContactOrderEnergyCreatorContactOrderEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::IntermolEnergyCreatorIntermolEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::MissingEnergyCreatorMissingEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::EnvEnergyCreatorEnvEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::EnvSmoothEnergyCreatorEnvSmoothEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::OmegaTetherEnergyCreatorOmegaTetherEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::OtherPoseEnergyCreatorOtherPoseEnergyCreator_registrator
 
static EnergyMethodRegistrator< core::scoring::methods::NMerRefEnergyCreatorNMerRefEnergyCreator_registrator
 
static EnergyMethodRegistrator< core::scoring::methods::NMerPSSMEnergyCreatorNMerPSSMEnergyCreator_registrator
 
static EnergyMethodRegistrator< core::scoring::methods::NMerSVMEnergyCreatorNMerSVMEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::P_AA_EnergyCreatorP_AA_EnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::P_AA_ss_EnergyCreatorP_AA_ss_EnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::P_AA_pp_EnergyCreatorP_AA_pp_EnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::AbegoEnergyCreatorAbegoEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::PackStatEnergyCreatorPackStatEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::PairEnergyCreatorPairEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::PeptideBondEnergyCreatorPeptideBondEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::ProClosureEnergyCreatorProClosureEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::BurialEnergyCreatorBurialCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::Burial_v2EnergyCreatorBurial_v2Creator_registrator
 
static EnergyMethodRegistrator< energy_methods::CovalentLabelingEnergyCreatorCovalentLabelingEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::CovalentLabelingFAEnergyCreatorCovalentLabelingFAEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::DEPC_MS_EnergyCreatorDEPC_MS_EnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::HRFDynamicsEnergyCreatorHRFDynamicsEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::HRF_MSLabelingEnergyCreatorHRF_MSLabelingEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::CCS_IMMSEnergyCreatorCCS_IMMSEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RG_Energy_FastCreatorRG_Energy_FastCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RG_LocalEnergyCreatorRG_LocalEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::SA_EnergyCreatorSA_EnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::SSElementMotifContactEnergyCreatorSSElementMotifContactEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::D2H_SA_EnergyCreatorD2H_SA_EnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::ProQ_EnergyCreatorProQ_EnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RMS_EnergyCreatorRMS_EnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RamaPreProEnergyCreatorRamaPreProEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RamachandranEnergy2BCreatorRamachandranEnergy2BCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RamachandranEnergyCreatorRamachandranEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::ReferenceEnergyCreatorReferenceEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::ReferenceEnergyNoncanonicalCreatorReferenceEnergyNoncanonicalCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::SecondaryStructureEnergyCreatorSecondaryStructureEnergyCreator_registrator
 
static EnergyMethodRegistrator< pack::guidance_scoreterms::sap::SapConstraintEnergyCreatorSapConstraintEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::dfire::DFIRE_EnergyCreatorDFIRE_EnergyCreator_registrator
 
static EnergyMethodRegistrator< scoring::vdwaals::VDW_EnergyCreatorVDW_EnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::GoapEnergyCreatorGoapEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RingClosureEnergyCreatorRingClosureEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::AromaticBackboneRestraintEnergyCreatorAromaticBackboneRestraintEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::SugarBackboneEnergyCreatorSugarBackboneEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::DumpTrajectoryEnergyCreatorDumpTrajectoryEnergy_registrator
 
static EnergyMethodRegistrator< energy_methods::NetChargeEnergyCreatorNetChargeEnergyCreator_registrator
 
static EnergyMethodRegistrator< pack::guidance_scoreterms::buried_unsat_penalty::BuriedUnsatPenaltyCreatorBuriedUnsatPenaltyCreator_registrator
 
static EnergyMethodRegistrator< pack::guidance_scoreterms::voids_penalty_energy::VoidsPenaltyEnergyCreatorVoidsPenaltyEnergyCreator_registrator
 
static EnergyMethodRegistrator< pack::dunbrack::DunbrackEnergyCreatorDunbrackEnergyCreator_registrator
 
static EnergyMethodRegistrator< pack::dunbrack::cenrot::CenRotDunEnergyCreatorCenRotDunEnergyCreator_registrator
 
static EnergyMethodRegistrator< scoring::nv::NVscoreCreatorNVscoreCreator_registrator
 
static EnergyMethodRegistrator< scoring::orbitals::OrbitalsScoreCreatorOrbitalsScoreCreator_registrator
 
static EnergyMethodRegistrator< scoring::interface_::DDPscoreCreatorDDPscoreCreator_registrator
 
static EnergyMethodRegistrator< scoring::carbon_hbonds::CarbonHBondEnergyCreatorCarbonHBondEnergyCreator_registrator
 
static EnergyMethodRegistrator< scoring::custom_pair_distance::FullatomCustomPairDistanceEnergyCreatorFullatomCustomPairDistanceEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::CustomAtomPairEnergyCreatorCustomAtomPairEnergy_registrator
 
static EnergyMethodRegistrator< energy_methods::FastDensEnergyCreatorFastDensEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::ElecDensCenEnergyCreatorElecDensCenEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::ElecDensAllAtomCenEnergyCreatorElecDensAllAtomCenEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::ElecDensEnergyCreatorElecDensEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::XtalMLEnergyCreatorXtalMLEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::ElecDensAtomwiseEnergyCreatorElecDensAtomwiseEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::ExactOccludedHbondSolEnergyCreatorExactOccludedHbondSolEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::ContextDependentGeometricSolEnergyCreatorContextDependentGeometricSolEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::ContextIndependentGeometricSolEnergyCreatorContextIndependentGeometricSolEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::OccludedHbondSolEnergyCreatorOccludedHbondSolEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::OccludedHbondSolEnergy_onebodyCreatorOccludedHbondSolEnergy_onebodyCreator_registrator
 
static EnergyMethodRegistrator< scoring::elec::FA_ElecEnergyCreatorFA_ElecEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RNA_FA_ElecEnergyCreatorRNA_FA_ElecEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::FA_ElecEnergyAroAroCreatorFA_ElecEnergyAroAroCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::FA_ElecEnergyAroAllCreatorFA_ElecEnergyAroAllCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::FA_GrpElecEnergyCreatorFA_GrpElecEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::HackAroEnergyCreatorHackAroEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::DEEREnergyCreatorDEEREnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::DNAChiEnergyCreatorDNAChiEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::DNATorsionEnergyCreatorDNATorsionEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::LoopCloseEnergyCreatorLoopCloseEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::MgEnergyCreatorMgEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RNA_MgPointEnergyCreatorRNA_MgPointEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::DNA_BaseEnergyCreatorDNA_BaseEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::DNA_DihedralEnergyCreatorDNA_DihedralEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::DirectReadoutEnergyCreatorDirectReadoutEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::DistanceChainbreakEnergyCreatorDistanceChainbreakEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::Fa_MbenvEnergyCreatorFa_MbenvEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::Fa_MbsolvEnergyCreatorFa_MbsolvEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::FreeDOF_EnergyCreatorFreeDOF_EnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::GenBornEnergyCreatorGenBornEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::GenericBondedEnergyCreatorGenericBondedEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::VdWTinkerEnergyCreatorVdWTinkerEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::MultipoleElecEnergyCreatorMultipoleElecEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::SASAEnergyCreatorSASAEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::FACTSEnergyCreatorFACTSEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::HybridVDW_EnergyCreatorHybridVDW_EnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::LK_PolarNonPolarEnergyCreatorLK_PolarNonPolarEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::LK_hackCreatorLK_hackCreator_registrator
 
static EnergyMethodRegistrator< scoring::lkball::LK_BallEnergyCreatorLK_BallEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::LinearChainbreakEnergyCreatorLinearChainbreakEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::LinearBranchEnergyCreatorLinearBranchEnergyCreator_registrator
 
static EnergyMethodRegistrator< scoring::lkball::LK_DomeEnergyCreatorLK_DomeEnergyCreator_registrator
 
static EnergyMethodRegistrator< pack::guidance_scoreterms::lk_dome::LK_DomePackEnergyCreatorLK_DomePackEnergyCreator_registrator
 
static EnergyMethodRegistrator< scoring::methods::MMBondAngleEnergyCreatorMMBondAngleEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::CartesianBondedEnergyCreatorCartesianBondedEnergyCreator_registrator
 
static EnergyMethodRegistrator< scoring::methods::MMBondLengthEnergyCreatorMMBondLengthEnergyCreator_registrator
 
static EnergyMethodRegistrator< scoring::methods::MMTorsionEnergyCreatorMMTorsionEnergyCreator_registrator
 
static EnergyMethodRegistrator< scoring::methods::MMLJEnergyInterCreatorMMLJEnergyInterCreator_registrator
 
static EnergyMethodRegistrator< scoring::methods::MMLJEnergyIntraCreatorMMLJEnergyIntraCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::MembraneCbetaEnergyCreatorMembraneCbetaEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::MembraneCenPairEnergyCreatorMembraneCenPairEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::MembraneEnvEnergyCreatorMembraneEnvEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::MembraneEnvPenaltiesCreatorMembraneEnvPenaltiesCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::MPPairEnergyCreatorMPPairEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::MPEnvEnergyCreatorMPEnvEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::MPCbetaEnergyCreatorMPCbetaEnergyCreator_registrator
 
static EnergyMethodRegistrator< scoring::membrane::MPNonHelixPenaltyCreatorMPNonHelixPenaltyCreator_registrator
 
static EnergyMethodRegistrator< scoring::membrane::MPTerminiPenaltyCreatorMPTerminiPenaltyCreator_registrator
 
static EnergyMethodRegistrator< scoring::membrane::MPTMProjPenaltyCreatorMPTMProjPenaltyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::FaMPEnvEnergyCreatorFaMPEnvEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::FaMPSolvEnergyCreatorFaMPSolvEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::FaMPEnvSmoothEnergyCreatorFaMPEnvSMoothEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::FaMPAsymEzCBEnergyCreatorFaMPAsymEzCBEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::FaMPAsymEzCGEnergyCreatorFaMPAsymEzCGEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::MPResidueLipophilicityEnergyCreatorMPResidueLipophilicityEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::MPHelicalityEnergyCreatorMPHelicalityEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::MPSpanInsertionEnergyCreatorMPSpanInsertionEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::MPSpanAngleEnergyCreatorMPSpanAngleEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::SmoothCenPairEnergyCreatorSmoothCenPairEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::SmoothEnvEnergyCreatorSmoothEnvEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::CenRotPairEnergyCreatorCenRotPairEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::CenRotEnvEnergyCreatorCenRotEnvEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::CenHBEnergyCreatorCenHBEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::MembraneLipoCreatorMembraneLipoCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::MembraneEnvSmoothEnergyCreatorMembraneEnvSmoothEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::pHEnergyCreatorpHEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::ChemicalShiftAnisotropyEnergyCreatorChemicalShiftAnisotropyEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::DipolarCouplingEnergyCreatorDipolarCouplingEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::ResidualDipolarCouplingEnergyCreatorResidualDipolarCouplingEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::ResidualDipolarCouplingEnergy_RohlCreatorResidualDipolarCouplingEnergy_RohlCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::MotifDockEnergyCreatorMotifDockEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::SuckerEnergyCreatorSuckerEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::GaussianOverlapEnergyCreatorGaussianOverlapEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::YHHPlanarityEnergyCreatorYYHPlanarityEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::HydroxylTorsionEnergyCreatorHydroxylTorsionEnergyCreator_registrator
 
static EnergyMethodRegistrator< pack::interaction_graph::SurfaceEnergyCreatorSurfaceEnergyCreator_registrator
 
static EnergyMethodRegistrator< pack::interaction_graph::HPatchEnergyCreatorHPatchEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::SymmetricLigandEnergyCreatorSymmetricLigandEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::UnfoldedStateEnergyCreatorUnfoldedStateEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::SplitUnfoldedTwoBodyEnergyCreatorSplitUnfoldedTwoBodyEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::WaterAdductHBondEnergyCreatorWaterAdductHBondEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::WaterAdductIntraEnergyCreatorWaterAdductIntraEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::WaterSpecificEnergyCreatorWaterSpecificEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::HolesEnergyCreatorHolesEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::SurfVolEnergyCreatorSurfVolEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::SurfEnergyCreatorSurfEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RG_Energy_RNACreatorRG_Energy_RNACreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RNA_BulgeEnergyCreatorRNA_BulgeEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RNA_ChemicalMappingEnergyCreatorRNA_ChemicalMappingEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RNA_DataBackboneEnergyCreatorRNA_DataBackboneEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RNA_FullAtomStackingEnergyCreatorRNA_FullAtomStackingEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RNA_JR_SuiteEnergyCreatorRNA_JR_SuiteEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RNA_LJ_BaseEnergyCreatorRNA_LJ_BaseEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RNA_PairwiseLowResolutionEnergyCreatorRNA_PairwiseLowResolutionEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RNA_PartitionEnergyCreatorRNA_PartitionEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RNP_LowResEnergyCreatorRNP_LowResEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RNP_LowResPairDistEnergyCreatorRNP_LowResPairDistEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RNP_LowResStackEnergyCreatorRNP_LowResStackEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RNA_StubCoordinateEnergyCreatorRNA_StubCoordinateEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RNA_SugarCloseEnergyCreatorRNA_SugarCloseEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RNA_SuiteEnergyCreatorRNA_SuiteEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::TNA_SuiteEnergyCreatorTNA_SuiteEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RNA_TorsionEnergyCreatorRNA_TorsionEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RNA_VDW_EnergyCreatorRNA_VDW_EnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RNA_FullAtomVDW_BasePhosphateCreatorRNA_FullAtomVDW_BasePhosphateCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::StackElecEnergyCreatorStackElecEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::RNA_ChemicalShiftEnergyCreatorNA_ChemicalShiftEnergyCreator_registrator
 
static EnergyMethodRegistrator< scoring::sym_e::symECreatorsymECreator_registrator
 
static EnergyMethodRegistrator< energy_methods::PoissonBoltzmannEnergyCreatorPoissonBoltzmannEnergyCreator_registrator
 
static EnergyMethodRegistrator< core::energy_methods::RNA_CoarseDistEnergyCreatorRNA_CoarseDistEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::FastSAXSEnergyCreatorFastSAXSEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::SAXSEnergyCreatorCENSAXSEnergyCreatorCEN_registrator
 
static EnergyMethodRegistrator< energy_methods::SAXSEnergyCreatorFASAXSEnergyCreatorFA_registrator
 
static EnergyMethodRegistrator< energy_methods::SAXSEnergyCreatorSAXSEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::PointWaterEnergyCreatorPointWaterEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::FiberDiffractionEnergyCreatorFiberDiffractionEnergyCreator_registrator
 
static EnergyMethodRegistrator< energy_methods::FiberDiffractionEnergyDensCreatorFiberDiffractionEnergyDensCreator_registrator
 
static RotamerLibrarySpecificationRegistrator< chemical::rotamers::BasicRotamerLibrarySpecificationCreatorBasicRotamerLibrarySpecificationCreator_registrator
 
static RotamerLibrarySpecificationRegistrator< chemical::rotamers::CenrotRotamerLibrarySpecificationCreatorCenrotRotamerLibrarySpecificationCreator_registrator
 
static RotamerLibrarySpecificationRegistrator< chemical::rotamers::DunbrackRotamerLibrarySpecificationCreatorDunbrackRotamerLibrarySpecificationCreator_registrator
 
static RotamerLibrarySpecificationRegistrator< chemical::rotamers::NCAARotamerLibrarySpecificationCreatorNCAARotamerLibrarySpecificationCreator_registrator
 
static RotamerLibrarySpecificationRegistrator< chemical::rotamers::PDBRotamerLibrarySpecificationCreatorPDBRotamerLibrarySpecificationCreator_registrator
 
static SingleResidueRotamerLibraryRegistrator< pack::dunbrack::SingleResidueDunbrackLibraryCreatorSingleResidueDunbrackLibraryCreator_registrator
 
static SingleResidueRotamerLibraryRegistrator< pack::rotamers::SingleBasicRotamerLibraryCreatorSingleBasicRotamerLibraryCreator_registrator
 
static SingleResidueRotamerLibraryRegistrator< pack::dunbrack::cenrot::SingleResidueCenrotLibraryCreatorSingleCenrotRotamerLibraryCreator_registrator
 
static SingleResidueRotamerLibraryRegistrator< pack::rotamers::SingleLigandRotamerLibraryCreatorSingleLigandRotamerLibraryCreator_registrator
 
static SingleResidueRotamerLibraryRegistrator< pack::rotamers::SingleNCAARotamerLibraryCreatorSingleNCAARotamerLibraryCreator_registrator
 
static SingleResidueRotamerLibraryRegistrator< pack::rotamers::StoredRotamerLibraryCreatorStoredRotamerLibraryCreator_registrator
 
static ConstraintRegistrator< core::scoring::constraints::AmbiguousConstraintCreatorAmbiguousConstraintCreator_registrator
 
static ConstraintRegistrator< core::scoring::constraints::AmbiguousNMRConstraintCreatorAmbiguousNMRConstraintCreator_registrator
 
static ConstraintRegistrator< core::scoring::constraints::AmbiguousNMRDistanceConstraintCreatorAmbiguousNMRDistanceConstraintCreator_registrator
 
static ConstraintRegistrator< core::scoring::constraints::AngleConstraintCreatorAngleConstraintCreator_registrator
 
static ConstraintRegistrator< core::scoring::constraints::AtomPairConstraintCreatorAtomPairConstraintCreator_registrator
 
static ConstraintRegistrator< core::scoring::constraints::BasePairConstraintCreatorBasePairConstraintCreator_registrator
 
static ConstraintRegistrator< core::scoring::constraints::BigBinConstraintCreatorBigBinConstraintCreator_registrator
 
static ConstraintRegistrator< core::scoring::constraints::CoordinateConstraintCreatorCoordinateConstraintCreator_registrator
 
static ConstraintRegistrator< core::scoring::constraints::DihedralConstraintCreatorDihedralConstraintCreator_registrator
 
static ConstraintRegistrator< core::scoring::constraints::DihedralPairConstraintCreatorDihedralPairConstraintCreator_registrator
 
static ConstraintRegistrator< core::scoring::constraints::KofNConstraintCreatorKofNConstraintCreator_registrator
 
static ConstraintRegistrator< core::scoring::constraints::LocalCoordinateConstraintCreatorLocalCoordinateConstraintCreator_registrator
 
static ConstraintRegistrator< core::scoring::constraints::MultiConstraintCreatorMultiConstraintCreator_registrator
 
static ConstraintRegistrator< core::scoring::constraints::NamedAtomPairConstraintCreatorNamedAtomPairConstraintCreator_registrator
 
static ConstraintRegistrator< core::scoring::constraints::NamedAngleConstraintCreatorNamedAngleConstraintCreator_registrator
 
static ConstraintRegistrator< core::scoring::constraints::FabConstraintCreatorFabConstraintCreator_registrator
 
static ConstraintRegistrator< core::pack::dunbrack::DunbrackConstraintCreatorDunbrackConstraintCreator_registrator
 
static ConstraintRegistrator< core::scoring::constraints::SiteConstraintCreatorSiteConstraintCreator_registrator
 
static ConstraintRegistrator< core::scoring::constraints::SiteConstraintResiduesCreatorSiteConstraintResiduesCreator_registrator
 
static ConstraintRegistrator< core::scoring::constraints::SequenceProfileConstraintCreatorSequenceProfileConstraintCreator_registrator
 
static SilentStructRegistrator< core::io::silent::ProteinSilentStructCreatorProteinSilentStructCreator_registrator
 
static SilentStructRegistrator< core::io::silent::ProteinSilentStruct_SinglePrecCreatorProteinSilentStruct_SinglePrecCreator_registrator
 
static SilentStructRegistrator< core::io::silent::RNA_SilentStructCreatorRNA_SilentStructCreator_registrator
 
static SilentStructRegistrator< core::import_pose::PDBSilentStructCreatorPDBSilentStructCreator_registrator
 
static SilentStructRegistrator< core::io::silent::BinarySilentStructCreatorBinarySilentStructCreator_registrator
 
static SilentStructRegistrator< core::io::silent::ScoreFileSilentStructCreatorScoreFileSilentStructCreator_registrator
 
static SilentStructRegistrator< core::io::silent::ScoreJumpFileSilentStructCreatorScoreJumpFileSilentStructCreator_registrator
 
static SilentStructRegistrator< core::io::silent::RigidBodySilentStructCreatorRigidBodySilentStructCreator_registrator
 
static SequenceRegistrator< core::sequence::SimpleSequenceCreatorSimpleSequenceCreator_registrator
 
static SequenceRegistrator< core::sequence::SequenceProfileCreatorSequenceProfileCreator_registrator
 
static SequenceRegistrator< core::sequence::SequenceCouplingCreatorSequenceCouplingCreator_registrator
 
static SequenceRegistrator< core::sequence::CompositeSequenceCreatorCompositeSequenceCreator_registrator
 
static TaskOperationRegistrator< RestrictYSDesignCreatorRestrictYSDesignCreator_registrator
 
static TaskOperationRegistrator< PreventRepackingCreatorPreventRepackingCreator_registrator
 
static TaskOperationRegistrator< PreserveCBetaCreatorPreserveCBetaCreator_registrator
 
static TaskOperationRegistrator< AppendRotamerSetCreatorAppendRotamerSetCreator_registrator
 
static TaskOperationRegistrator< AppendRotamerCreatorAppendRotamerCreator_registrator
 
static TaskOperationRegistrator< DesignRestrictionsCreatorDesignRestrictionsCreator_registrator
 
static TaskOperationRegistrator< EnableMultiCoolAnnealerCreatorEnableMultiCoolAnnealerCreator_registrator
 
static TaskOperationRegistrator< EnableSmartAnnealerCreatorEnableSmartAnnealerCreator_registrator
 
static TaskOperationRegistrator< ExtraRotamersCreatorExtraRotamersCreator_registrator
 
static TaskOperationRegistrator< ExtraChiCutoffCreatorExtraChiCutoffCreator_registrator
 
static TaskOperationRegistrator< SetRotamerCouplingsCreatorSetRotamerCouplingsCreator_registrator
 
static TaskOperationRegistrator< SetRotamerLinksCreatorSetRotamerLinksCreator_registrator
 
static TaskOperationRegistrator< ReadResfileCreatorReadResfileCreator_registrator
 
static TaskOperationRegistrator< ReadResfileAndObeyLengthEventsCreatorReadResfileAndObeyLengthEventsCreator_registrator
 
static TaskOperationRegistrator< IncludeCurrentCreatorIncludeCurrentCreator_registrator
 
static TaskOperationRegistrator< InitializeExtraRotsFromCommandlineCreatorInitializeExtraRotsFromCommandlineCreator_registrator
 
static TaskOperationRegistrator< InitializeFromCommandlineCreatorInitializeFromCommandlineCreator_registrator
 
static TaskOperationRegistrator< UseMultiCoolAnnealerCreatorUseMultiCoolAnnealerCreator_registrator
 
static TaskOperationRegistrator< InitializeFromOptionCollectionCreatorInitializeFromOptionCollectionCreator_registrator
 
static TaskOperationRegistrator< ExtraRotamersGenericCreatorExtraRotamersGenericCreator_registrator
 
static TaskOperationRegistrator< RotamerExplosionCreatorRotamerExplosionCreator_registrator
 
static TaskOperationRegistrator< RestrictAbsentCanonicalAASCreatorRestrictAbsentCanonicalAASCreator_registrator
 
static TaskOperationRegistrator< DisallowIfNonnativeCreatorDisallowIfNonnativeCreator_registrator
 
static TaskOperationRegistrator< RestrictToSpecifiedBaseResidueTypesCreatorRestrictToSpecifiedBaseResidueTypesCreator_registrator
 
static TaskOperationRegistrator< ProhibitSpecifiedBaseResidueTypesCreatorProhibitSpecifiedBaseResidueTypesCreator_registrator
 
static TaskOperationRegistrator< RestrictToResiduePropertiesCreatorRestrictToResiduePropertiesCreator_registrator
 
static TaskOperationRegistrator< ProhibitResiduePropertiesCreatorProhibitResiduePropertiesCreator_registrator
 
static TaskOperationRegistrator< RestrictResidueToRepackingCreatorRestrictResidueToRepackingCreator_registrator
 
static TaskOperationRegistrator< RestrictToRepackingCreatorRestrictToRepackingCreator_registrator
 
static TaskOperationRegistrator< RestrictInteractionGraphThreadsOperationCreatorRestrictInteractionGraphThreadsOperationCreator_registrator
 
static TaskOperationRegistrator< OperateOnCertainResiduesCreatorOperateOnCertainResiduesCreator_registrator
 
static TaskOperationRegistrator< OperateOnResidueSubsetCreatorOperateOnResidueSubsetCreator_registrator
 
static TaskOperationRegistrator< NoRepackDisulfidesCreatorNoRepackDisulfidesCreator_registrator
 
static TaskOperationRegistrator< ClashBasedRepackShellCreatorClashBasedRepackShellCreator_registrator
 
static TaskOperationRegistrator< OptCysHGCreatorOptCysHGCreator_registrator
 
static TaskOperationRegistrator< OptHCreatorOptHCreator_registrator
 
static TaskOperationRegistrator< KeepSequenceSymmetryCreatorKeepSequenceSymmetryCreator_registrator
 
static ResLvlTaskOperationRegistrator< RestrictToRepackingRLTCreatorRestrictToRepackingRLTCreator_registrator
 
static ResLvlTaskOperationRegistrator< RestrictAbsentCanonicalAASRLTCreatorRestrictAbsentCanonicalAASRLTCreator_registrator
 
static ResLvlTaskOperationRegistrator< RestrictAbsentCanonicalAASExceptNativeRLTCreatorRestrictAbsentCanonicalAASExceptNativeRLTCreator_registrator
 
static ResLvlTaskOperationRegistrator< DisallowIfNonnativeRLTCreatorDisallowIfNonnativeRLTCreator_registrator
 
static ResLvlTaskOperationRegistrator< PreventRepackingRLTCreatorPreventRepackingRLTCreator_registrator
 
static ResLvlTaskOperationRegistrator< AddBehaviorRLTCreatorAddBehaviorRLTCreator_registrator
 
static ResLvlTaskOperationRegistrator< IncludeCurrentRLTCreatorIncludeCurrentRLTCreator_registrator
 
static ResLvlTaskOperationRegistrator< PreserveCBetaRLTCreatorPreserveCBetaRLTCreator_registrator
 
static ResLvlTaskOperationRegistrator< ExtraChiCutoffRLTCreatorExtraChiCutoffRLTCreator_registrator
 
static ResLvlTaskOperationRegistrator< ExtraRotamersGenericRLTCreatorExtraRotamersGenericRLTCreator_registrator
 
static ResFilterRegistrator< ResidueHasPropertyCreatorResidueHasPropertyCreator_registrator
 
static ResFilterRegistrator< ResiduePDBInfoHasLabelCreatorResiduePDBInfoHasLabelCreator_registrator
 
static ResFilterRegistrator< ResidueLacksPropertyCreatorResidueLacksPropertyCreator_registrator
 
static ResFilterRegistrator< ResidueName3IsCreatorResidueName3IsCreator_registrator
 
static ResFilterRegistrator< ResidueName3IsntCreatorResidueName3IsntCreator_registrator
 
static ResFilterRegistrator< ResidueIndexIsCreatorResidueIndexIsCreator_registrator
 
static ResFilterRegistrator< ResidueIndexIsntCreatorResidueIndexIsntCreator_registrator
 
static ResFilterRegistrator< ChainIsCreatorChainIsCreator_registrator
 
static ResFilterRegistrator< ChainIsntCreatorChainIsntCreator_registrator
 
static ResFilterRegistrator< AnyResFilterCreatorAnyResFilterCreator_registrator
 
static ResFilterRegistrator< AllResFilterCreatorAllResFilterCreator_registrator
 
static ResFilterRegistrator< NoResFilterCreatorNoResFilterCreator_registrator
 
static ResFilterRegistrator< ResidueTypeFilterCreatorResidueTypeResFilterCreator_registrator
 
static ResidueSelectorRegistrator< AndResidueSelectorCreatorreg_AndResidueSelectorCreator
 
static ResidueSelectorRegistrator< BFactorSelectorCreatorreg_BfactorSelectorCreator
 
static ResidueSelectorRegistrator< BinSelectorCreatorreg_BinSelectorCreator
 
static ResidueSelectorRegistrator< BondedResidueSelectorCreatorreg_BondedResidueSelectorCreator
 
static ResidueSelectorRegistrator< ChainSelectorCreatorreg_ChainSelectorCreator
 
static ResidueSelectorRegistrator< core::pack::task::residue_selector::ClashBasedShellSelectorCreatorreg_ClashBasedShellSelectorCreator
 
static ResidueSelectorRegistrator< CloseContactResidueSelectorCreatorreg_CloseContactResidueSelectorCreator
 
static ResidueSelectorRegistrator< DensityFitResidueSelectorCreatorreg_DensityFitResidueSelectorCreator
 
static ResidueSelectorRegistrator< GlycanResidueSelectorCreatorreg_GlycanResidueSelectorCreator
 
static ResidueSelectorRegistrator< RandomGlycanFoliageSelectorCreatorreg_RandomGlycanFoliageSelectorCreator
 
static ResidueSelectorRegistrator< GlycanLayerSelectorCreatorreg_GlycanLayerSelectorCreator
 
static ResidueSelectorRegistrator< GlycanSequonsSelectorCreatorreg_GlycanSequonsSelectorCreator
 
static ResidueSelectorRegistrator< InterGroupInterfaceByVectorSelectorCreatorreg_InterGroupInterfaceByVectorSelectorCreator
 
static ResidueSelectorRegistrator< JumpDownstreamSelectorCreatorreg_JumpDownstreamSelectorCreator
 
static ResidueSelectorRegistrator< JumpUpstreamSelectorCreatorreg_JumpUpstreamSelectorCreator
 
static ResidueSelectorRegistrator< AsymmetricUnitSelectorCreatorreg_AsymmetricUnitSelectorCreator
 
static ResidueSelectorRegistrator< LogicResidueSelectorCreatorreg_LogicResidueSelectorCreator
 
static ResidueSelectorRegistrator< NeighborhoodResidueSelectorCreatorreg_NeighborhoodResidueSelectorCreator
 
static ResidueSelectorRegistrator< NotResidueSelectorCreatorreg_NotResidueSelectorCreator
 
static ResidueSelectorRegistrator< NumNeighborsSelectorCreatorreg_NumNeighborsSelectorCreator
 
static ResidueSelectorRegistrator< LayerSelectorCreatorreg_LayerSelectorCreator
 
static ResidueSelectorRegistrator< OrResidueSelectorCreatorreg_OrResidueSelectorCreator
 
static ResidueSelectorRegistrator< PhiSelectorCreatorreg_PhiSelectorCreator
 
static ResidueSelectorRegistrator< PrimarySequenceNeighborhoodSelectorCreatorreg_PrimarySequenceNeighborhoodSelectorCreator
 
static ResidueSelectorRegistrator< RandomResidueSelectorCreatorreg_RandomResidueSelectorCreator
 
static ResidueSelectorRegistrator< ResidueIndexSelectorCreatorreg_ResidueIndexSelectorCreator
 
static ResidueSelectorRegistrator< ResidueNameSelectorCreatorreg_ResidueNameSelectorCreator
 
static ResidueSelectorRegistrator< ResidueInSequenceMotifSelectorCreatorreg_ResidueInSequenceMotifSelectorCreator
 
static ResidueSelectorRegistrator< ResiduePropertySelectorCreatorreg_ResiduePropertySelectorCreator
 
static ResidueSelectorRegistrator< ResidueSpanSelectorCreatorreg_ResidueSpanSelectorCreator
 
static ResidueSelectorRegistrator< TrueResidueSelectorCreatorreg_TrueResidueSelectorCreator
 
static ResidueSelectorRegistrator< FalseResidueSelectorCreatorreg_FalseResidueSelectorCreator
 
static ResidueSelectorRegistrator< ResidueInMembraneSelectorCreatorreg_ResidueInMembraneSelectorCreator
 
static ResidueSelectorRegistrator< ResiduePDBInfoHasLabelSelectorCreatorreg_ResiduePDBInfoHasLabelSelectorCreator
 
static ResidueSelectorRegistrator< SecondaryStructureSelectorCreatorreg_SecondaryStructureSelectorCreator
 
static ResidueSelectorRegistrator< SSElementSelectorCreatorreg_SSElementSelectorCreator
 
static ResidueSelectorRegistrator< SymmetricalResidueSelectorCreatorreg_SymmetricalResidueSelectorCreator
 
static ResidueSelectorRegistrator< ScoreTermValueBasedSelectorCreatorreg_ScoreTermValueBasedSelectorCreator
 
static ResidueSelectorRegistrator< SliceResidueSelectorCreatorreg_SliceResidueSelectorCreator
 
static ResidueSelectorRegistrator< SimpleMetricSelectorCreatorreg_SimpleMetricSelectorCreator
 
static JumpSelectorRegistrator< AndJumpSelectorCreatorreg_AndJumpSelectorCreator
 
static JumpSelectorRegistrator< ExclusivelySharedJumpSelectorCreatorreg_ExclusivelySharedJumpSelectorCreator
 
static JumpSelectorRegistrator< InterchainJumpSelectorCreatorreg_InterchainJumpSelectorCreator
 
static JumpSelectorRegistrator< JumpForResidueCreatorreg_JumpForResidueCreator
 
static JumpSelectorRegistrator< JumpIndexSelectorCreatorreg_JumpIndexSelectorCreator
 
static JumpSelectorRegistrator< NotJumpSelectorCreatorreg_NotJumpSelectorCreator
 
static JumpSelectorRegistrator< OrJumpSelectorCreatorreg_OrJumpSelectorCreator
 
static PackerPaletteRegistrator< CustomBaseTypePackerPaletteCreatorreg_CustomBaseTypePackerPaletteCreator
 
static PackerPaletteRegistrator< DefaultPackerPaletteCreatorreg_DefaultPackerPaletteCreator
 
static PackerPaletteRegistrator< NoDesignPackerPaletteCreatorreg_NoDesignPackerPaletteCreator
 
static ResourceLoaderRegistrator< core::conformation::symmetry::SymmDataLoaderCreatorSymmDataLoaderCreator_registrator
 
static ResourceLoaderRegistrator< core::import_pose::PoseResourceLoaderCreatorPoseResourceLoaderCreator_registrator
 
pre_talaris_2013_behavior_settings const restore_sc12_settings
 

Function Documentation

◆ check_deprecated_flags()

void core::init::check_deprecated_flags ( )

Check for deprecated flags specified by the user and output error messages if necessary.

Check for deprecated flags and utility exit if any deprecated flags are detected.

@detail If you deprecate a long standing flag, add a line to this function to describe what the deprecated flag has been replaced with. If the user specifies one of these flags, Rosetta will utility exit with a helpful message directing the user towards the new functionality

References TR().

Referenced by init().

◆ check_load_fconfig()

void core::init::check_load_fconfig ( )

Check if common config file exists and load it/them as flags files.

References TR().

Referenced by init().

◆ init() [1/2]

void core::init::init ( int  argc,
char *  argv[] 
)

Init basic core systems: options system, random system.

References check_deprecated_flags(), check_load_fconfig(), protocols::init::init(), init_complex_options(), init_crash_reporter(), init_mpi(), init_options(), init_paths(), init_profiling(), init_resources(), init_score_function_corrections(), init_source_revision(), init_tracers(), core::chemical::bcl::initialize_bcl_main(), core::chemical::bcl::initialize_bcl_random(), core::id::initialize_core_id_globals(), core::chemical::rdkit::initialize_rdkit_random(), core::chemical::bcl::locate_bcl(), locate_rosetta_database(), random_delay(), report_application_command(), core::chemical::bcl::require_bcl(), and TR().

Referenced by protocols::canonical_sampling::CanonicalSamplingMover::apply(), protocols::hybridization::BackboneTorsionPerturbation::BackboneTorsionPerturbation(), protocols::protein_interface_design::movers::BestHotspotCstMover::BestHotspotCstMover(), protocols::indexed_structure_store::search::bind_QueryDatabase(), protocols::md::CartesianMD::CartesianMD(), protocols::hybridization::CartesianSampler::CartesianSampler(), protocols::toolbox::KCluster::cluster(), protocols::LoopRebuild::desired_loops(), protocols::rpc::BasicCmdLineInit::do_init(), protocols::docking::DockingProtocol::DockingProtocol(), core::scoring::electron_density::ElectronDensity::ElectronDensity(), protocols::simple_filters::EnergyPerResidueFilter::EnergyPerResidueFilter(), protocols::enzdes::EnzScoreFilter::EnzScoreFilter(), core::scoring::fiber_diffraction::FiberDiffraction::FiberDiffraction(), protocols::magnesium::SampleGrid::figure_out_box_bounds(), protocols::hybridization::FragmentBiasAssigner::FragmentBiasAssigner(), protocols::LoopRebuild::get_ccd_closure_exist(), protocols::LoopRebuild::get_chain_break_tolerance(), protocols::LoopRebuild::get_combine_if_fail_exist(), protocols::LoopRebuild::get_desired_loops_exist(), core::pose::rna::get_leontis_westhof_table(), protocols::LoopRebuild::get_loop_combine_rate(), protocols::LoopRebuild::get_looprlx_cycle_ratio(), protocols::magnesium::get_octahedral_uniform_rotation_sampler(), protocols::LoopRebuild::get_rmsd_tolerance(), protocols::LoopRebuild::get_score_filter_cutoff(), protocols::magnesium::get_water_uniform_rotation_sampler(), protocols::loophash::MPI_LoopHashRefine_Emperor::go(), protocols::loophash::MPI_LoopHashRefine_Master::go(), protocols::mpi_refinement::MPI_Refine_Emperor::go(), protocols::mpi_refinement::MPI_Refine_Master::go(), protocols::hybridization::HybridizeProtocol::HybridizeProtocol(), protocols::magnesium::MgHydrater::hydrate_magnesium_in_pose(), protocols::init::init(), init(), core::pose::xyzStripeHashPose::init_posehash(), protocols::sic_dock::xyzStripeHashPoseWithMeta::init_with_pose(), protocols::stepwise::monte_carlo::mover::initialize_attachment_type_name(), core::pose::full_model_info::initialize_full_model_parameter_type_name(), protocols::stepwise::monte_carlo::mover::initialize_move_type_name(), core::scoring::sasa::input_legrand_sasa_dats(), core::scoring::packstat::old::input_sasa_dats(), core::scoring::input_sasa_dats(), protocols::hybridization::InsertChunkMover::InsertChunkMover(), protocols::simple_filters::InterfaceHbondsFilter::InterfaceHbondsFilter(), protocols::protein_interface_design::filters::InterfaceHolesFilter::InterfaceHolesFilter(), protocols::simple_filters::InterfaceHydrophobicResidueContactsFilter::InterfaceHydrophobicResidueContactsFilter(), core::import_pose::is_blank_seq(), protocols::enzdes::LigInterfaceEnergyFilter::LigInterfaceEnergyFilter(), protocols::LoopRebuild::loop_model(), core::pose::PDBInfo::PDBInfo(), protocols::cyclic_peptide::PeptideStubMover::PeptideStubMover(), core::fragment::rna::FullAtomRNA_Fragments::read_vall_torsions(), core::io::silent::SilentStruct::rename_energies(), protocols::simple_filters::ResidueIEFilter::ResidueIEFilter(), protocols::simple_filters::ResiduesInInterfaceFilter::ResiduesInInterfaceFilter(), protocols::protein_interface_design::Revert::Revert(), protocols::simple_moves::ShakeStructureMover::run_mc(), protocols::symmetry::SymShakeStructureMover::run_mc(), protocols::mpi_refinement::Serial_Refine::Serial_Refine(), protocols::simple_moves::ShakeStructureMover::set_temp_based_on_ens_diversity(), protocols::score_filters::ScoreCutoffFilter::set_unweighted(), protocols::protein_interface_design::movers::SetupHotspotConstraintsLoopsMover::SetupHotspotConstraintsLoopsMover(), protocols::protein_interface_design::movers::SetupHotspotConstraintsMover::SetupHotspotConstraintsMover(), protocols::LoopRebuild::shorten_long_terminal_loop(), protocols::sparta::Sparta::SpartaLib::SpartaLib(), protocols::moves::to_string(), and protocols::stepwise::modeler::rna::phosphate::to_string().

◆ init() [2/2]

void core::init::init ( utility::vector1< std::string > const &  args)

wrapper for core system Init

References init().

◆ init_beta_correction()

void core::init::init_beta_correction ( utility::options::OptionCollection &  options)

Initialize the most recent beta score function (-beta)

References init_beta_july15_correction(), init_beta_nov16_correction(), and init_gen_potential_settings().

Referenced by init_score_function_corrections().

◆ init_beta_july15_correction()

void core::init::init_beta_july15_correction ( utility::options::OptionCollection &  options)

Initialize the -beta_july15 score function.

References TR().

Referenced by init_beta_correction().

◆ init_beta_nov16_correction()

void core::init::init_beta_nov16_correction ( utility::options::OptionCollection &  options,
bool  setweight 
)

Initialize the -beta_nov16 score function.

References TR().

Referenced by init_beta_correction().

◆ init_complex_options()

void core::init::init_complex_options ( )

After the tracers have been initialized, now go back and modify some of the values in the options system based on (hard coded) inter-flag relationships. Some of these relationships are set in the basic::options::process() function, some of them are handled in this .cc file.

Referenced by init().

◆ init_correct_correction()

void core::init::init_correct_correction ( utility::options::OptionCollection &  options)

Initialize the -correct correction.

References core::scoring::p_aa_pp.

Referenced by init_score_function_corrections().

◆ init_crash_reporter()

void core::init::init_crash_reporter ( int  argc,
char *  argv[] 
)

Setup crash reporter.

Referenced by init().

◆ init_crystal_refinement_correction()

void core::init::init_crystal_refinement_correction ( utility::options::OptionCollection &  options)

Initialize the crystal refinement correction.

Referenced by init_score_function_corrections().

◆ init_dna_correction()

void core::init::init_dna_correction ( utility::options::OptionCollection &  options)

Apply some DNA-specific mods that are still in testing phase; only if -corrections::newdna present.

Referenced by init_score_function_corrections().

◆ init_facts_correction()

void core::init::init_facts_correction ( utility::options::OptionCollection &  options)

Initialize the FACTS correction.

Referenced by init_score_function_corrections().

◆ init_gen_potential_settings()

void core::init::init_gen_potential_settings ( utility::options::OptionCollection &  options)

Initialize new atom types for Rosetta generic potential.

References TR().

Referenced by init_beta_correction().

◆ init_hbond_sp2_correction()

void core::init::init_hbond_sp2_correction ( utility::options::OptionCollection &  options)

Initialize the hbond Sp2 correction Deprecated as Talaris2013 becomes default.

References TR().

Referenced by init_score_function_corrections().

◆ init_mpi() [1/2]

void core::init::init_mpi ( int  argc,
char *  argv[] 
)

Initialize MPI (message passing interface) for parallel applications.

◆ init_mpi() [2/2]

void core::init::init_mpi ( int  ,
char **   
)

Referenced by init().

◆ init_nonideal_correction()

void core::init::init_nonideal_correction ( utility::options::OptionCollection &  options)

Initialize nonideal bond geometry correction.

References protocols::antibody::design::dualspace, core::scoring::get_score_function(), and TR().

Referenced by init_score_function_corrections().

◆ init_options()

void core::init::init_options ( int  argc,
char *  argv[] 
)

Initialize the option system, which manages command line options.

Referenced by init().

◆ init_paths()

void core::init::init_paths ( )

Setup basic search paths.

References protocols::hybridization::path.

Referenced by init().

◆ init_pre_beta_nov15_etable()

void core::init::init_pre_beta_nov15_etable ( utility::options::OptionCollection &  options)

Initialize the -pre_beta_nov15 etable.

Referenced by init_score_function_corrections().

◆ init_profiling()

void core::init::init_profiling ( )

Profiling measures execution performance.

Referenced by init().

◆ init_resources()

void core::init::init_resources ( )

Set up system resources.

References PROCESS_STACK_SIZE.

Referenced by init().

◆ init_restore_score12prime()

void core::init::init_restore_score12prime ( utility::options::OptionCollection &  options)

restore the the score function to the Score12prime version

References revert_to_pre_talaris_2013_defaults().

◆ init_revert_to_pre_talaris_2013_mistake()

void core::init::init_revert_to_pre_talaris_2013_mistake ( utility::options::OptionCollection &  options)

Initialize the "revert to before Talaris2013" mistake.

References revert_to_pre_talaris_2013_defaults().

Referenced by init_score_function_corrections().

◆ init_revert_to_talaris()

void core::init::init_revert_to_talaris ( utility::options::OptionCollection &  options)

Initialize the revert-to-Talaris2014.

References TR().

Referenced by init_score_function_corrections().

◆ init_score_function_corrections()

void core::init::init_score_function_corrections ( utility::options::OptionCollection &  options)

◆ init_shapovalov_lib_fixes_enable_correction()

void core::init::init_shapovalov_lib_fixes_enable_correction ( utility::options::OptionCollection &  options)

Initialize the -shapovalov_lib_fixes_enable correction.

Referenced by init_score_function_corrections().

◆ init_source_revision()

void core::init::init_source_revision ( )

Choose to output source version control information?

References TR().

Referenced by init().

◆ init_spades_score_function_correction()

void core::init::init_spades_score_function_correction ( utility::options::OptionCollection &  options)

Alter the water/water and water/non-water solvation potential if the score:water_hybrid_sf flag is on the command line.

References TR().

Referenced by init_score_function_corrections().

◆ init_tracers()

void core::init::init_tracers ( )

Tracers control output to std::cout and std::cerr.

References core::chemical::bcl::initialize_bcl_tracers(), core::chemical::rdkit::initialize_rdkit_tracers(), and protocols::wum::mpi_rank().

Referenced by init().

◆ locate_rosetta_database()

void core::init::locate_rosetta_database ( )

Locate rosetta_database.

References protocols::hybridization::path, and TR().

Referenced by init().

◆ random_delay()

void core::init::random_delay ( )

Choose to randomly delay execution to desyncronize parallel execution.

References TR().

Referenced by init().

◆ report_application_command()

void core::init::report_application_command ( int  argc,
char *  argv[] 
)

Describe the application execution command.

References TR().

Referenced by init().

◆ revert_to_pre_talaris_2013_defaults()

void core::init::revert_to_pre_talaris_2013_defaults ( utility::options::OptionCollection &  options)

◆ TR() [1/2]

static basic::Tracer core::init::TR ( "core.init"  )
static

◆ TR() [2/2]

static basic::Tracer core::init::TR ( "core.init.score_function_corrections"  )
static

Variable Documentation

◆ AACompositionEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::AACompositionEnergyCreator > core::init::AACompositionEnergyCreator_registrator
static

◆ AARepeatEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::AARepeatEnergyCreator > core::init::AARepeatEnergyCreator_registrator
static

◆ AbegoEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::AbegoEnergyCreator > core::init::AbegoEnergyCreator_registrator
static

◆ AddBehaviorRLTCreator_registrator

ResLvlTaskOperationRegistrator< AddBehaviorRLTCreator > core::init::AddBehaviorRLTCreator_registrator
static

◆ AllResFilterCreator_registrator

ResFilterRegistrator< AllResFilterCreator > core::init::AllResFilterCreator_registrator
static

◆ AmbiguousConstraintCreator_registrator

ConstraintRegistrator< core::scoring::constraints::AmbiguousConstraintCreator > core::init::AmbiguousConstraintCreator_registrator
static

◆ AmbiguousNMRConstraintCreator_registrator

ConstraintRegistrator< core::scoring::constraints::AmbiguousNMRConstraintCreator > core::init::AmbiguousNMRConstraintCreator_registrator
static

◆ AmbiguousNMRDistanceConstraintCreator_registrator

ConstraintRegistrator< core::scoring::constraints::AmbiguousNMRDistanceConstraintCreator > core::init::AmbiguousNMRDistanceConstraintCreator_registrator
static

◆ AngleConstraintCreator_registrator

ConstraintRegistrator< core::scoring::constraints::AngleConstraintCreator > core::init::AngleConstraintCreator_registrator
static

◆ AnyResFilterCreator_registrator

ResFilterRegistrator< AnyResFilterCreator > core::init::AnyResFilterCreator_registrator
static

◆ AppendRotamerCreator_registrator

TaskOperationRegistrator< AppendRotamerCreator > core::init::AppendRotamerCreator_registrator
static

◆ AppendRotamerSetCreator_registrator

TaskOperationRegistrator< AppendRotamerSetCreator > core::init::AppendRotamerSetCreator_registrator
static

◆ ApproximateBuriedUnsatPenaltyCreator_registrator

◆ ArgCationPiEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::ArgCationPiEnergyCreator > core::init::ArgCationPiEnergyCreator_registrator
static

◆ AromaticBackboneRestraintEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::AromaticBackboneRestraintEnergyCreator > core::init::AromaticBackboneRestraintEnergyCreator_registrator
static

◆ AspartimidePenaltyEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::AspartimidePenaltyEnergyCreator > core::init::AspartimidePenaltyEnergyCreator_registrator
static

◆ AtomPairConstraintCreator_registrator

ConstraintRegistrator< core::scoring::constraints::AtomPairConstraintCreator > core::init::AtomPairConstraintCreator_registrator
static

◆ BasePairConstraintCreator_registrator

ConstraintRegistrator< core::scoring::constraints::BasePairConstraintCreator > core::init::BasePairConstraintCreator_registrator
static

◆ BasicRotamerLibrarySpecificationCreator_registrator

RotamerLibrarySpecificationRegistrator< chemical::rotamers::BasicRotamerLibrarySpecificationCreator > core::init::BasicRotamerLibrarySpecificationCreator_registrator
static

◆ BigBinConstraintCreator_registrator

ConstraintRegistrator< core::scoring::constraints::BigBinConstraintCreator > core::init::BigBinConstraintCreator_registrator
static

◆ BinarySilentStructCreator_registrator

SilentStructRegistrator< core::io::silent::BinarySilentStructCreator > core::init::BinarySilentStructCreator_registrator
static

◆ BranchEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::BranchEnergyCreator > core::init::BranchEnergyCreator_registrator
static

◆ Burial_v2Creator_registrator

EnergyMethodRegistrator< energy_methods::Burial_v2EnergyCreator > core::init::Burial_v2Creator_registrator
static

◆ BurialCreator_registrator

EnergyMethodRegistrator< energy_methods::BurialEnergyCreator > core::init::BurialCreator_registrator
static

◆ BuriedUnsatPenaltyCreator_registrator

◆ CarbonHBondEnergyCreator_registrator

EnergyMethodRegistrator< scoring::carbon_hbonds::CarbonHBondEnergyCreator > core::init::CarbonHBondEnergyCreator_registrator
static

◆ CartesianBondedEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::CartesianBondedEnergyCreator > core::init::CartesianBondedEnergyCreator_registrator
static

◆ CCS_IMMSEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::CCS_IMMSEnergyCreator > core::init::CCS_IMMSEnergyCreator_registrator
static

◆ CenHBEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::CenHBEnergyCreator > core::init::CenHBEnergyCreator_registrator
static

◆ CenPairEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::CenPairEnergyCreator > core::init::CenPairEnergyCreator_registrator
static

◆ CenPairMotifDegreeEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::CenPairMotifDegreeEnergyCreator > core::init::CenPairMotifDegreeEnergyCreator_registrator
static

◆ CenPairMotifEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::CenPairMotifEnergyCreator > core::init::CenPairMotifEnergyCreator_registrator
static

◆ CenRotDunEnergyCreator_registrator

EnergyMethodRegistrator< pack::dunbrack::cenrot::CenRotDunEnergyCreator > core::init::CenRotDunEnergyCreator_registrator
static

◆ CenRotEnvEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::CenRotEnvEnergyCreator > core::init::CenRotEnvEnergyCreator_registrator
static

◆ CenRotPairEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::CenRotPairEnergyCreator > core::init::CenRotPairEnergyCreator_registrator
static

◆ CenrotRotamerLibrarySpecificationCreator_registrator

RotamerLibrarySpecificationRegistrator< chemical::rotamers::CenrotRotamerLibrarySpecificationCreator > core::init::CenrotRotamerLibrarySpecificationCreator_registrator
static

◆ CentroidDisulfideEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods ::CentroidDisulfideEnergyCreator > core::init::CentroidDisulfideEnergyCreator_registrator
static

◆ ChainbreakEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::ChainbreakEnergyCreator > core::init::ChainbreakEnergyCreator_registrator
static

◆ ChainIsCreator_registrator

ResFilterRegistrator< ChainIsCreator > core::init::ChainIsCreator_registrator
static

◆ ChainIsntCreator_registrator

ResFilterRegistrator< ChainIsntCreator > core::init::ChainIsntCreator_registrator
static

◆ ChemicalShiftAnisotropyEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::ChemicalShiftAnisotropyEnergyCreator > core::init::ChemicalShiftAnisotropyEnergyCreator_registrator
static

◆ ClashBasedRepackShellCreator_registrator

TaskOperationRegistrator< ClashBasedRepackShellCreator > core::init::ClashBasedRepackShellCreator_registrator
static

◆ CompositeSequenceCreator_registrator

SequenceRegistrator< core::sequence::CompositeSequenceCreator > core::init::CompositeSequenceCreator_registrator
static

◆ ConstraintsEnergyCreator_registrator

EnergyMethodRegistrator< scoring::constraints::ConstraintsEnergyCreator > core::init::ConstraintsEnergyCreator_registrator
static

◆ ContactOrderEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::ContactOrderEnergyCreator > core::init::ContactOrderEnergyCreator_registrator
static

◆ ContextDependentGeometricSolEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::ContextDependentGeometricSolEnergyCreator > core::init::ContextDependentGeometricSolEnergyCreator_registrator
static

◆ ContextIndependentGeometricSolEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::ContextIndependentGeometricSolEnergyCreator > core::init::ContextIndependentGeometricSolEnergyCreator_registrator
static

◆ CoordinateConstraintCreator_registrator

ConstraintRegistrator< core::scoring::constraints::CoordinateConstraintCreator > core::init::CoordinateConstraintCreator_registrator
static

◆ CovalentLabelingEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::CovalentLabelingEnergyCreator> core::init::CovalentLabelingEnergyCreator_registrator
static

◆ CovalentLabelingFAEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::CovalentLabelingFAEnergyCreator> core::init::CovalentLabelingFAEnergyCreator_registrator
static

◆ CustomAtomPairEnergy_registrator

EnergyMethodRegistrator< energy_methods::CustomAtomPairEnergyCreator > core::init::CustomAtomPairEnergy_registrator
static

◆ D2H_SA_EnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::D2H_SA_EnergyCreator > core::init::D2H_SA_EnergyCreator_registrator
static

◆ DDPscoreCreator_registrator

EnergyMethodRegistrator< scoring::interface_::DDPscoreCreator > core::init::DDPscoreCreator_registrator
static

◆ DEEREnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::DEEREnergyCreator > core::init::DEEREnergyCreator_registrator
static

◆ DEPC_MS_EnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::DEPC_MS_EnergyCreator > core::init::DEPC_MS_EnergyCreator_registrator
static

◆ DesignRestrictionsCreator_registrator

TaskOperationRegistrator< DesignRestrictionsCreator > core::init::DesignRestrictionsCreator_registrator
static

◆ DFIRE_EnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::dfire::DFIRE_EnergyCreator > core::init::DFIRE_EnergyCreator_registrator
static

◆ DihedralConstraintCreator_registrator

ConstraintRegistrator< core::scoring::constraints::DihedralConstraintCreator > core::init::DihedralConstraintCreator_registrator
static

◆ DihedralPairConstraintCreator_registrator

ConstraintRegistrator< core::scoring::constraints::DihedralPairConstraintCreator > core::init::DihedralPairConstraintCreator_registrator
static

◆ DipolarCouplingEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::DipolarCouplingEnergyCreator > core::init::DipolarCouplingEnergyCreator_registrator
static

◆ DirectReadoutEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::DirectReadoutEnergyCreator > core::init::DirectReadoutEnergyCreator_registrator
static

◆ DisallowIfNonnativeCreator_registrator

TaskOperationRegistrator< DisallowIfNonnativeCreator > core::init::DisallowIfNonnativeCreator_registrator
static

◆ DisallowIfNonnativeRLTCreator_registrator

ResLvlTaskOperationRegistrator< DisallowIfNonnativeRLTCreator > core::init::DisallowIfNonnativeRLTCreator_registrator
static

◆ DistanceChainbreakEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::DistanceChainbreakEnergyCreator > core::init::DistanceChainbreakEnergyCreator_registrator
static

◆ DisulfideMatchingEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::DisulfideMatchingEnergyCreator > core::init::DisulfideMatchingEnergyCreator_registrator
static

◆ DNA_BaseEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::DNA_BaseEnergyCreator > core::init::DNA_BaseEnergyCreator_registrator
static

◆ DNA_DihedralEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::DNA_DihedralEnergyCreator > core::init::DNA_DihedralEnergyCreator_registrator
static

◆ DNAChiEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::DNAChiEnergyCreator > core::init::DNAChiEnergyCreator_registrator
static

◆ DNATorsionEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::DNATorsionEnergyCreator > core::init::DNATorsionEnergyCreator_registrator
static

◆ DumpTrajectoryEnergy_registrator

EnergyMethodRegistrator< energy_methods::DumpTrajectoryEnergyCreator > core::init::DumpTrajectoryEnergy_registrator
static

◆ DunbrackConstraintCreator_registrator

ConstraintRegistrator< core::pack::dunbrack::DunbrackConstraintCreator > core::init::DunbrackConstraintCreator_registrator
static

◆ DunbrackEnergyCreator_registrator

EnergyMethodRegistrator< pack::dunbrack::DunbrackEnergyCreator > core::init::DunbrackEnergyCreator_registrator
static

◆ DunbrackRotamerLibrarySpecificationCreator_registrator

RotamerLibrarySpecificationRegistrator< chemical::rotamers::DunbrackRotamerLibrarySpecificationCreator > core::init::DunbrackRotamerLibrarySpecificationCreator_registrator
static

◆ ElecDensAllAtomCenEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::ElecDensAllAtomCenEnergyCreator > core::init::ElecDensAllAtomCenEnergyCreator_registrator
static

◆ ElecDensAtomwiseEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::ElecDensAtomwiseEnergyCreator > core::init::ElecDensAtomwiseEnergyCreator_registrator
static

◆ ElecDensCenEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::ElecDensCenEnergyCreator > core::init::ElecDensCenEnergyCreator_registrator
static

◆ ElecDensEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::ElecDensEnergyCreator > core::init::ElecDensEnergyCreator_registrator
static

◆ EnableMultiCoolAnnealerCreator_registrator

TaskOperationRegistrator< EnableMultiCoolAnnealerCreator > core::init::EnableMultiCoolAnnealerCreator_registrator
static

◆ EnableSmartAnnealerCreator_registrator

TaskOperationRegistrator< EnableSmartAnnealerCreator > core::init::EnableSmartAnnealerCreator_registrator
static

◆ EnvEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::EnvEnergyCreator > core::init::EnvEnergyCreator_registrator
static

◆ EnvSmoothEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::EnvSmoothEnergyCreator > core::init::EnvSmoothEnergyCreator_registrator
static

◆ EtableClassicIntraEnergyCreator_registrator

EnergyMethodRegistrator< scoring::etable::EtableClassicIntraEnergyCreator > core::init::EtableClassicIntraEnergyCreator_registrator
static

◆ EtableEnergyCreator_registrator

EnergyMethodRegistrator< scoring::etable::EtableEnergyCreator > core::init::EtableEnergyCreator_registrator
static

◆ ExactOccludedHbondSolEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::ExactOccludedHbondSolEnergyCreator > core::init::ExactOccludedHbondSolEnergyCreator_registrator
static

◆ ExtraChiCutoffCreator_registrator

TaskOperationRegistrator< ExtraChiCutoffCreator > core::init::ExtraChiCutoffCreator_registrator
static

◆ ExtraChiCutoffRLTCreator_registrator

ResLvlTaskOperationRegistrator< ExtraChiCutoffRLTCreator > core::init::ExtraChiCutoffRLTCreator_registrator
static

◆ ExtraRotamersCreator_registrator

TaskOperationRegistrator< ExtraRotamersCreator > core::init::ExtraRotamersCreator_registrator
static

◆ ExtraRotamersGenericCreator_registrator

TaskOperationRegistrator< ExtraRotamersGenericCreator > core::init::ExtraRotamersGenericCreator_registrator
static

◆ ExtraRotamersGenericRLTCreator_registrator

ResLvlTaskOperationRegistrator< ExtraRotamersGenericRLTCreator > core::init::ExtraRotamersGenericRLTCreator_registrator
static

◆ FA_ElecEnergyAroAllCreator_registrator

EnergyMethodRegistrator< energy_methods::FA_ElecEnergyAroAllCreator > core::init::FA_ElecEnergyAroAllCreator_registrator
static

◆ FA_ElecEnergyAroAroCreator_registrator

EnergyMethodRegistrator< energy_methods::FA_ElecEnergyAroAroCreator > core::init::FA_ElecEnergyAroAroCreator_registrator
static

◆ FA_ElecEnergyCreator_registrator

EnergyMethodRegistrator< scoring::elec::FA_ElecEnergyCreator > core::init::FA_ElecEnergyCreator_registrator
static

◆ FA_GrpElecEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::FA_GrpElecEnergyCreator > core::init::FA_GrpElecEnergyCreator_registrator
static

◆ Fa_MbenvEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::Fa_MbenvEnergyCreator > core::init::Fa_MbenvEnergyCreator_registrator
static

◆ Fa_MbsolvEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::Fa_MbsolvEnergyCreator > core::init::Fa_MbsolvEnergyCreator_registrator
static

◆ FabConstraintCreator_registrator

ConstraintRegistrator< core::scoring::constraints::FabConstraintCreator > core::init::FabConstraintCreator_registrator
static

◆ FACTSEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::FACTSEnergyCreator > core::init::FACTSEnergyCreator_registrator
static

◆ FaMPAsymEzCBEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::FaMPAsymEzCBEnergyCreator > core::init::FaMPAsymEzCBEnergyCreator_registrator
static

◆ FaMPAsymEzCGEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::FaMPAsymEzCGEnergyCreator > core::init::FaMPAsymEzCGEnergyCreator_registrator
static

◆ FaMPEnvEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::FaMPEnvEnergyCreator > core::init::FaMPEnvEnergyCreator_registrator
static

◆ FaMPEnvSMoothEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::FaMPEnvSmoothEnergyCreator > core::init::FaMPEnvSMoothEnergyCreator_registrator
static

◆ FaMPSolvEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::FaMPSolvEnergyCreator > core::init::FaMPSolvEnergyCreator_registrator
static

◆ FastDensEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::FastDensEnergyCreator > core::init::FastDensEnergyCreator_registrator
static

◆ FastSAXSEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::FastSAXSEnergyCreator > core::init::FastSAXSEnergyCreator_registrator
static

◆ FiberDiffractionEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::FiberDiffractionEnergyCreator > core::init::FiberDiffractionEnergyCreator_registrator
static

◆ FiberDiffractionEnergyDensCreator_registrator

EnergyMethodRegistrator< energy_methods::FiberDiffractionEnergyDensCreator > core::init::FiberDiffractionEnergyDensCreator_registrator
static

◆ FreeDOF_EnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::FreeDOF_EnergyCreator > core::init::FreeDOF_EnergyCreator_registrator
static

◆ FullatomCustomPairDistanceEnergyCreator_registrator

EnergyMethodRegistrator< scoring::custom_pair_distance::FullatomCustomPairDistanceEnergyCreator > core::init::FullatomCustomPairDistanceEnergyCreator_registrator
static

◆ FullatomDisulfideEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::FullatomDisulfideEnergyCreator > core::init::FullatomDisulfideEnergyCreator_registrator
static

◆ GaussianOverlapEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::GaussianOverlapEnergyCreator > core::init::GaussianOverlapEnergyCreator_registrator
static

◆ GenBornEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::GenBornEnergyCreator > core::init::GenBornEnergyCreator_registrator
static

◆ GenericBondedEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::GenericBondedEnergyCreator > core::init::GenericBondedEnergyCreator_registrator
static

◆ GoapEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::GoapEnergyCreator > core::init::GoapEnergyCreator_registrator
static

◆ HackAroEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::HackAroEnergyCreator > core::init::HackAroEnergyCreator_registrator
static

◆ HBNetEnergyCreator_registrator

EnergyMethodRegistrator< pack::guidance_scoreterms::hbnet_energy::HBNetEnergyCreator > core::init::HBNetEnergyCreator_registrator
static

◆ HBondEnergyCreator_registrator

EnergyMethodRegistrator< scoring::hbonds::HBondEnergyCreator > core::init::HBondEnergyCreator_registrator
static

◆ HolesEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::HolesEnergyCreator > core::init::HolesEnergyCreator_registrator
static

◆ HPatchEnergyCreator_registrator

EnergyMethodRegistrator< pack::interaction_graph::HPatchEnergyCreator > core::init::HPatchEnergyCreator_registrator
static

◆ HRF_MSLabelingEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::HRF_MSLabelingEnergyCreator > core::init::HRF_MSLabelingEnergyCreator_registrator
static

◆ HRFDynamicsEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::HRFDynamicsEnergyCreator > core::init::HRFDynamicsEnergyCreator_registrator
static

◆ HybridVDW_EnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::HybridVDW_EnergyCreator > core::init::HybridVDW_EnergyCreator_registrator
static

◆ HydroxylTorsionEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::HydroxylTorsionEnergyCreator > core::init::HydroxylTorsionEnergyCreator_registrator
static

◆ IncludeCurrentCreator_registrator

TaskOperationRegistrator< IncludeCurrentCreator > core::init::IncludeCurrentCreator_registrator
static

◆ IncludeCurrentRLTCreator_registrator

ResLvlTaskOperationRegistrator< IncludeCurrentRLTCreator > core::init::IncludeCurrentRLTCreator_registrator
static

◆ InitializeExtraRotsFromCommandlineCreator_registrator

TaskOperationRegistrator< InitializeExtraRotsFromCommandlineCreator > core::init::InitializeExtraRotsFromCommandlineCreator_registrator
static

◆ InitializeFromCommandlineCreator_registrator

TaskOperationRegistrator< InitializeFromCommandlineCreator > core::init::InitializeFromCommandlineCreator_registrator
static

◆ InitializeFromOptionCollectionCreator_registrator

TaskOperationRegistrator< InitializeFromOptionCollectionCreator > core::init::InitializeFromOptionCollectionCreator_registrator
static

◆ IntermolEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::IntermolEnergyCreator > core::init::IntermolEnergyCreator_registrator
static

◆ KeepSequenceSymmetryCreator_registrator

TaskOperationRegistrator< KeepSequenceSymmetryCreator > core::init::KeepSequenceSymmetryCreator_registrator
static

◆ KofNConstraintCreator_registrator

ConstraintRegistrator< core::scoring::constraints::KofNConstraintCreator > core::init::KofNConstraintCreator_registrator
static

◆ LinearBranchEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::LinearBranchEnergyCreator > core::init::LinearBranchEnergyCreator_registrator
static

◆ LinearChainbreakEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::LinearChainbreakEnergyCreator > core::init::LinearChainbreakEnergyCreator_registrator
static

◆ LK_BallEnergyCreator_registrator

EnergyMethodRegistrator< scoring::lkball::LK_BallEnergyCreator > core::init::LK_BallEnergyCreator_registrator
static

◆ LK_DomeEnergyCreator_registrator

EnergyMethodRegistrator< scoring::lkball::LK_DomeEnergyCreator > core::init::LK_DomeEnergyCreator_registrator
static

◆ LK_DomePackEnergyCreator_registrator

EnergyMethodRegistrator< pack::guidance_scoreterms::lk_dome::LK_DomePackEnergyCreator > core::init::LK_DomePackEnergyCreator_registrator
static

◆ LK_hackCreator_registrator

EnergyMethodRegistrator< energy_methods::LK_hackCreator > core::init::LK_hackCreator_registrator
static

◆ LK_PolarNonPolarEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::LK_PolarNonPolarEnergyCreator > core::init::LK_PolarNonPolarEnergyCreator_registrator
static

◆ LocalCoordinateConstraintCreator_registrator

ConstraintRegistrator< core::scoring::constraints::LocalCoordinateConstraintCreator > core::init::LocalCoordinateConstraintCreator_registrator
static

◆ LoopCloseEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::LoopCloseEnergyCreator > core::init::LoopCloseEnergyCreator_registrator
static

◆ MembraneCbetaEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::MembraneCbetaEnergyCreator > core::init::MembraneCbetaEnergyCreator_registrator
static

◆ MembraneCenPairEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::MembraneCenPairEnergyCreator > core::init::MembraneCenPairEnergyCreator_registrator
static

◆ MembraneEnvEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::MembraneEnvEnergyCreator > core::init::MembraneEnvEnergyCreator_registrator
static

◆ MembraneEnvPenaltiesCreator_registrator

EnergyMethodRegistrator< energy_methods::MembraneEnvPenaltiesCreator > core::init::MembraneEnvPenaltiesCreator_registrator
static

◆ MembraneEnvSmoothEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::MembraneEnvSmoothEnergyCreator > core::init::MembraneEnvSmoothEnergyCreator_registrator
static

◆ MembraneLipoCreator_registrator

EnergyMethodRegistrator< energy_methods::MembraneLipoCreator > core::init::MembraneLipoCreator_registrator
static

◆ MgEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::MgEnergyCreator > core::init::MgEnergyCreator_registrator
static

◆ MHCEpitopeEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::MHCEpitopeEnergyCreator > core::init::MHCEpitopeEnergyCreator_registrator
static

◆ MissingEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::MissingEnergyCreator > core::init::MissingEnergyCreator_registrator
static

◆ MMBondAngleEnergyCreator_registrator

EnergyMethodRegistrator< scoring::methods::MMBondAngleEnergyCreator > core::init::MMBondAngleEnergyCreator_registrator
static

◆ MMBondLengthEnergyCreator_registrator

EnergyMethodRegistrator< scoring::methods::MMBondLengthEnergyCreator > core::init::MMBondLengthEnergyCreator_registrator
static

◆ MMLJEnergyInterCreator_registrator

EnergyMethodRegistrator< scoring::methods::MMLJEnergyInterCreator > core::init::MMLJEnergyInterCreator_registrator
static

◆ MMLJEnergyIntraCreator_registrator

EnergyMethodRegistrator< scoring::methods::MMLJEnergyIntraCreator > core::init::MMLJEnergyIntraCreator_registrator
static

◆ MMTorsionEnergyCreator_registrator

EnergyMethodRegistrator< scoring::methods::MMTorsionEnergyCreator > core::init::MMTorsionEnergyCreator_registrator
static

◆ MotifDockEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::MotifDockEnergyCreator > core::init::MotifDockEnergyCreator_registrator
static

◆ MPCbetaEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::MPCbetaEnergyCreator > core::init::MPCbetaEnergyCreator_registrator
static

◆ MPEnvEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::MPEnvEnergyCreator > core::init::MPEnvEnergyCreator_registrator
static

◆ MPHelicalityEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::MPHelicalityEnergyCreator > core::init::MPHelicalityEnergyCreator_registrator
static

◆ MPNonHelixPenaltyCreator_registrator

EnergyMethodRegistrator< scoring::membrane::MPNonHelixPenaltyCreator > core::init::MPNonHelixPenaltyCreator_registrator
static

◆ MPPairEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::MPPairEnergyCreator > core::init::MPPairEnergyCreator_registrator
static

◆ MPResidueLipophilicityEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::MPResidueLipophilicityEnergyCreator > core::init::MPResidueLipophilicityEnergyCreator_registrator
static

◆ MPSpanAngleEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::MPSpanAngleEnergyCreator > core::init::MPSpanAngleEnergyCreator_registrator
static

◆ MPSpanInsertionEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::MPSpanInsertionEnergyCreator > core::init::MPSpanInsertionEnergyCreator_registrator
static

◆ MPTerminiPenaltyCreator_registrator

EnergyMethodRegistrator< scoring::membrane::MPTerminiPenaltyCreator > core::init::MPTerminiPenaltyCreator_registrator
static

◆ MPTMProjPenaltyCreator_registrator

EnergyMethodRegistrator< scoring::membrane::MPTMProjPenaltyCreator > core::init::MPTMProjPenaltyCreator_registrator
static

◆ MultiConstraintCreator_registrator

ConstraintRegistrator< core::scoring::constraints::MultiConstraintCreator > core::init::MultiConstraintCreator_registrator
static

◆ MultipoleElecEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::MultipoleElecEnergyCreator > core::init::MultipoleElecEnergyCreator_registrator
static

◆ NA_ChemicalShiftEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::RNA_ChemicalShiftEnergyCreator > core::init::NA_ChemicalShiftEnergyCreator_registrator
static

◆ NamedAngleConstraintCreator_registrator

ConstraintRegistrator< core::scoring::constraints::NamedAngleConstraintCreator > core::init::NamedAngleConstraintCreator_registrator
static

◆ NamedAtomPairConstraintCreator_registrator

ConstraintRegistrator< core::scoring::constraints::NamedAtomPairConstraintCreator > core::init::NamedAtomPairConstraintCreator_registrator
static

◆ NCAARotamerLibrarySpecificationCreator_registrator

RotamerLibrarySpecificationRegistrator< chemical::rotamers::NCAARotamerLibrarySpecificationCreator > core::init::NCAARotamerLibrarySpecificationCreator_registrator
static

◆ NetChargeEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::NetChargeEnergyCreator > core::init::NetChargeEnergyCreator_registrator
static

◆ NMerPSSMEnergyCreator_registrator

EnergyMethodRegistrator< core::scoring::methods::NMerPSSMEnergyCreator > core::init::NMerPSSMEnergyCreator_registrator
static

◆ NMerRefEnergyCreator_registrator

EnergyMethodRegistrator< core::scoring::methods::NMerRefEnergyCreator > core::init::NMerRefEnergyCreator_registrator
static

◆ NMerSVMEnergyCreator_registrator

EnergyMethodRegistrator< core::scoring::methods::NMerSVMEnergyCreator > core::init::NMerSVMEnergyCreator_registrator
static

◆ NoRepackDisulfidesCreator_registrator

TaskOperationRegistrator< NoRepackDisulfidesCreator > core::init::NoRepackDisulfidesCreator_registrator
static

◆ NoResFilterCreator_registrator

ResFilterRegistrator< NoResFilterCreator > core::init::NoResFilterCreator_registrator
static

◆ NPDHBondEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::NPDHBondEnergyCreator > core::init::NPDHBondEnergyCreator_registrator
static

◆ NVscoreCreator_registrator

EnergyMethodRegistrator< scoring::nv::NVscoreCreator > core::init::NVscoreCreator_registrator
static

◆ OccludedHbondSolEnergy_onebodyCreator_registrator

EnergyMethodRegistrator< energy_methods::OccludedHbondSolEnergy_onebodyCreator > core::init::OccludedHbondSolEnergy_onebodyCreator_registrator
static

◆ OccludedHbondSolEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::OccludedHbondSolEnergyCreator > core::init::OccludedHbondSolEnergyCreator_registrator
static

◆ OmegaTetherEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::OmegaTetherEnergyCreator > core::init::OmegaTetherEnergyCreator_registrator
static

◆ OperateOnCertainResiduesCreator_registrator

TaskOperationRegistrator< OperateOnCertainResiduesCreator > core::init::OperateOnCertainResiduesCreator_registrator
static

◆ OperateOnResidueSubsetCreator_registrator

TaskOperationRegistrator< OperateOnResidueSubsetCreator > core::init::OperateOnResidueSubsetCreator_registrator
static

◆ OptCysHGCreator_registrator

TaskOperationRegistrator< OptCysHGCreator > core::init::OptCysHGCreator_registrator
static

◆ OptHCreator_registrator

TaskOperationRegistrator< OptHCreator > core::init::OptHCreator_registrator
static

◆ OrbitalsScoreCreator_registrator

EnergyMethodRegistrator< scoring::orbitals::OrbitalsScoreCreator > core::init::OrbitalsScoreCreator_registrator
static

◆ OtherPoseEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::OtherPoseEnergyCreator > core::init::OtherPoseEnergyCreator_registrator
static

◆ P_AA_EnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::P_AA_EnergyCreator > core::init::P_AA_EnergyCreator_registrator
static

◆ P_AA_pp_EnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::P_AA_pp_EnergyCreator > core::init::P_AA_pp_EnergyCreator_registrator
static

◆ P_AA_ss_EnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::P_AA_ss_EnergyCreator > core::init::P_AA_ss_EnergyCreator_registrator
static

◆ PackStatEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::PackStatEnergyCreator > core::init::PackStatEnergyCreator_registrator
static

◆ PairEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::PairEnergyCreator > core::init::PairEnergyCreator_registrator
static

◆ PDBRotamerLibrarySpecificationCreator_registrator

RotamerLibrarySpecificationRegistrator< chemical::rotamers::PDBRotamerLibrarySpecificationCreator > core::init::PDBRotamerLibrarySpecificationCreator_registrator
static

◆ PDBSilentStructCreator_registrator

SilentStructRegistrator< core::import_pose::PDBSilentStructCreator > core::init::PDBSilentStructCreator_registrator
static

◆ PeptideBondEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::PeptideBondEnergyCreator > core::init::PeptideBondEnergyCreator_registrator
static

◆ pHEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::pHEnergyCreator > core::init::pHEnergyCreator_registrator
static

◆ PointWaterEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::PointWaterEnergyCreator > core::init::PointWaterEnergyCreator_registrator
static

◆ PoissonBoltzmannEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::PoissonBoltzmannEnergyCreator > core::init::PoissonBoltzmannEnergyCreator_registrator
static

◆ PoseResourceLoaderCreator_registrator

ResourceLoaderRegistrator< core::import_pose::PoseResourceLoaderCreator > core::init::PoseResourceLoaderCreator_registrator
static

◆ PreserveCBetaCreator_registrator

TaskOperationRegistrator< PreserveCBetaCreator > core::init::PreserveCBetaCreator_registrator
static

◆ PreserveCBetaRLTCreator_registrator

ResLvlTaskOperationRegistrator< PreserveCBetaRLTCreator > core::init::PreserveCBetaRLTCreator_registrator
static

◆ PreventRepackingCreator_registrator

TaskOperationRegistrator< PreventRepackingCreator > core::init::PreventRepackingCreator_registrator
static

◆ PreventRepackingRLTCreator_registrator

ResLvlTaskOperationRegistrator< PreventRepackingRLTCreator > core::init::PreventRepackingRLTCreator_registrator
static

◆ ProClosureEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::ProClosureEnergyCreator > core::init::ProClosureEnergyCreator_registrator
static

◆ ProhibitResiduePropertiesCreator_registrator

TaskOperationRegistrator< ProhibitResiduePropertiesCreator > core::init::ProhibitResiduePropertiesCreator_registrator
static

◆ ProhibitSpecifiedBaseResidueTypesCreator_registrator

TaskOperationRegistrator< ProhibitSpecifiedBaseResidueTypesCreator > core::init::ProhibitSpecifiedBaseResidueTypesCreator_registrator
static

◆ ProQ_EnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::ProQ_EnergyCreator > core::init::ProQ_EnergyCreator_registrator
static

◆ ProteinSilentStruct_SinglePrecCreator_registrator

SilentStructRegistrator< core::io::silent::ProteinSilentStruct_SinglePrecCreator > core::init::ProteinSilentStruct_SinglePrecCreator_registrator
static

◆ ProteinSilentStructCreator_registrator

SilentStructRegistrator< core::io::silent::ProteinSilentStructCreator > core::init::ProteinSilentStructCreator_registrator
static

◆ RamachandranEnergy2BCreator_registrator

EnergyMethodRegistrator< energy_methods::RamachandranEnergy2BCreator > core::init::RamachandranEnergy2BCreator_registrator
static

◆ RamachandranEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::RamachandranEnergyCreator > core::init::RamachandranEnergyCreator_registrator
static

◆ RamaPreProEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::RamaPreProEnergyCreator > core::init::RamaPreProEnergyCreator_registrator
static

◆ ReadResfileAndObeyLengthEventsCreator_registrator

TaskOperationRegistrator< ReadResfileAndObeyLengthEventsCreator > core::init::ReadResfileAndObeyLengthEventsCreator_registrator
static

◆ ReadResfileCreator_registrator

TaskOperationRegistrator< ReadResfileCreator > core::init::ReadResfileCreator_registrator
static

◆ ReferenceEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::ReferenceEnergyCreator > core::init::ReferenceEnergyCreator_registrator
static

◆ ReferenceEnergyNoncanonicalCreator_registrator

EnergyMethodRegistrator< energy_methods::ReferenceEnergyNoncanonicalCreator > core::init::ReferenceEnergyNoncanonicalCreator_registrator
static

◆ reg_AndJumpSelectorCreator

JumpSelectorRegistrator< AndJumpSelectorCreator > core::init::reg_AndJumpSelectorCreator
static

◆ reg_AndResidueSelectorCreator

ResidueSelectorRegistrator< AndResidueSelectorCreator > core::init::reg_AndResidueSelectorCreator
static

◆ reg_AsymmetricUnitSelectorCreator

ResidueSelectorRegistrator< AsymmetricUnitSelectorCreator > core::init::reg_AsymmetricUnitSelectorCreator
static

◆ reg_BfactorSelectorCreator

ResidueSelectorRegistrator< BFactorSelectorCreator > core::init::reg_BfactorSelectorCreator
static

◆ reg_BinSelectorCreator

ResidueSelectorRegistrator< BinSelectorCreator > core::init::reg_BinSelectorCreator
static

◆ reg_BondedResidueSelectorCreator

ResidueSelectorRegistrator< BondedResidueSelectorCreator > core::init::reg_BondedResidueSelectorCreator
static

◆ reg_ChainSelectorCreator

ResidueSelectorRegistrator< ChainSelectorCreator > core::init::reg_ChainSelectorCreator
static

◆ reg_ClashBasedShellSelectorCreator

◆ reg_CloseContactResidueSelectorCreator

ResidueSelectorRegistrator< CloseContactResidueSelectorCreator > core::init::reg_CloseContactResidueSelectorCreator
static

◆ reg_CustomBaseTypePackerPaletteCreator

PackerPaletteRegistrator< CustomBaseTypePackerPaletteCreator > core::init::reg_CustomBaseTypePackerPaletteCreator
static

◆ reg_DefaultPackerPaletteCreator

PackerPaletteRegistrator< DefaultPackerPaletteCreator > core::init::reg_DefaultPackerPaletteCreator
static

◆ reg_DensityFitResidueSelectorCreator

ResidueSelectorRegistrator< DensityFitResidueSelectorCreator > core::init::reg_DensityFitResidueSelectorCreator
static

◆ reg_ExclusivelySharedJumpSelectorCreator

JumpSelectorRegistrator< ExclusivelySharedJumpSelectorCreator > core::init::reg_ExclusivelySharedJumpSelectorCreator
static

◆ reg_FalseResidueSelectorCreator

ResidueSelectorRegistrator< FalseResidueSelectorCreator > core::init::reg_FalseResidueSelectorCreator
static

◆ reg_GlycanLayerSelectorCreator

ResidueSelectorRegistrator< GlycanLayerSelectorCreator > core::init::reg_GlycanLayerSelectorCreator
static

◆ reg_GlycanResidueSelectorCreator

ResidueSelectorRegistrator< GlycanResidueSelectorCreator > core::init::reg_GlycanResidueSelectorCreator
static

◆ reg_GlycanSequonsSelectorCreator

ResidueSelectorRegistrator< GlycanSequonsSelectorCreator > core::init::reg_GlycanSequonsSelectorCreator
static

◆ reg_InterchainJumpSelectorCreator

JumpSelectorRegistrator< InterchainJumpSelectorCreator > core::init::reg_InterchainJumpSelectorCreator
static

◆ reg_InterGroupInterfaceByVectorSelectorCreator

ResidueSelectorRegistrator< InterGroupInterfaceByVectorSelectorCreator > core::init::reg_InterGroupInterfaceByVectorSelectorCreator
static

◆ reg_JumpDownstreamSelectorCreator

ResidueSelectorRegistrator< JumpDownstreamSelectorCreator > core::init::reg_JumpDownstreamSelectorCreator
static

◆ reg_JumpForResidueCreator

JumpSelectorRegistrator< JumpForResidueCreator > core::init::reg_JumpForResidueCreator
static

◆ reg_JumpIndexSelectorCreator

JumpSelectorRegistrator< JumpIndexSelectorCreator > core::init::reg_JumpIndexSelectorCreator
static

◆ reg_JumpUpstreamSelectorCreator

ResidueSelectorRegistrator< JumpUpstreamSelectorCreator > core::init::reg_JumpUpstreamSelectorCreator
static

◆ reg_LayerSelectorCreator

ResidueSelectorRegistrator< LayerSelectorCreator > core::init::reg_LayerSelectorCreator
static

◆ reg_LogicResidueSelectorCreator

ResidueSelectorRegistrator< LogicResidueSelectorCreator > core::init::reg_LogicResidueSelectorCreator
static

◆ reg_NeighborhoodResidueSelectorCreator

ResidueSelectorRegistrator< NeighborhoodResidueSelectorCreator > core::init::reg_NeighborhoodResidueSelectorCreator
static

◆ reg_NoDesignPackerPaletteCreator

PackerPaletteRegistrator< NoDesignPackerPaletteCreator > core::init::reg_NoDesignPackerPaletteCreator
static

◆ reg_NotJumpSelectorCreator

JumpSelectorRegistrator< NotJumpSelectorCreator > core::init::reg_NotJumpSelectorCreator
static

◆ reg_NotResidueSelectorCreator

ResidueSelectorRegistrator< NotResidueSelectorCreator > core::init::reg_NotResidueSelectorCreator
static

◆ reg_NumNeighborsSelectorCreator

ResidueSelectorRegistrator< NumNeighborsSelectorCreator > core::init::reg_NumNeighborsSelectorCreator
static

◆ reg_OrJumpSelectorCreator

JumpSelectorRegistrator< OrJumpSelectorCreator > core::init::reg_OrJumpSelectorCreator
static

◆ reg_OrResidueSelectorCreator

ResidueSelectorRegistrator< OrResidueSelectorCreator > core::init::reg_OrResidueSelectorCreator
static

◆ reg_PhiSelectorCreator

ResidueSelectorRegistrator< PhiSelectorCreator > core::init::reg_PhiSelectorCreator
static

◆ reg_PrimarySequenceNeighborhoodSelectorCreator

ResidueSelectorRegistrator< PrimarySequenceNeighborhoodSelectorCreator > core::init::reg_PrimarySequenceNeighborhoodSelectorCreator
static

◆ reg_RandomGlycanFoliageSelectorCreator

ResidueSelectorRegistrator< RandomGlycanFoliageSelectorCreator > core::init::reg_RandomGlycanFoliageSelectorCreator
static

◆ reg_RandomResidueSelectorCreator

ResidueSelectorRegistrator< RandomResidueSelectorCreator > core::init::reg_RandomResidueSelectorCreator
static

◆ reg_ResidueIndexSelectorCreator

ResidueSelectorRegistrator< ResidueIndexSelectorCreator > core::init::reg_ResidueIndexSelectorCreator
static

◆ reg_ResidueInMembraneSelectorCreator

ResidueSelectorRegistrator< ResidueInMembraneSelectorCreator > core::init::reg_ResidueInMembraneSelectorCreator
static

◆ reg_ResidueInSequenceMotifSelectorCreator

ResidueSelectorRegistrator< ResidueInSequenceMotifSelectorCreator > core::init::reg_ResidueInSequenceMotifSelectorCreator
static

◆ reg_ResidueNameSelectorCreator

ResidueSelectorRegistrator< ResidueNameSelectorCreator > core::init::reg_ResidueNameSelectorCreator
static

◆ reg_ResiduePDBInfoHasLabelSelectorCreator

ResidueSelectorRegistrator< ResiduePDBInfoHasLabelSelectorCreator > core::init::reg_ResiduePDBInfoHasLabelSelectorCreator
static

◆ reg_ResiduePropertySelectorCreator

ResidueSelectorRegistrator< ResiduePropertySelectorCreator > core::init::reg_ResiduePropertySelectorCreator
static

◆ reg_ResidueSpanSelectorCreator

ResidueSelectorRegistrator< ResidueSpanSelectorCreator > core::init::reg_ResidueSpanSelectorCreator
static

◆ reg_ScoreTermValueBasedSelectorCreator

ResidueSelectorRegistrator< ScoreTermValueBasedSelectorCreator > core::init::reg_ScoreTermValueBasedSelectorCreator
static

◆ reg_SecondaryStructureSelectorCreator

ResidueSelectorRegistrator< SecondaryStructureSelectorCreator > core::init::reg_SecondaryStructureSelectorCreator
static

◆ reg_SimpleMetricSelectorCreator

ResidueSelectorRegistrator< SimpleMetricSelectorCreator > core::init::reg_SimpleMetricSelectorCreator
static

◆ reg_SliceResidueSelectorCreator

ResidueSelectorRegistrator< SliceResidueSelectorCreator > core::init::reg_SliceResidueSelectorCreator
static

◆ reg_SSElementSelectorCreator

ResidueSelectorRegistrator< SSElementSelectorCreator > core::init::reg_SSElementSelectorCreator
static

◆ reg_SymmetricalResidueSelectorCreator

ResidueSelectorRegistrator< SymmetricalResidueSelectorCreator > core::init::reg_SymmetricalResidueSelectorCreator
static

◆ reg_TrueResidueSelectorCreator

ResidueSelectorRegistrator< TrueResidueSelectorCreator > core::init::reg_TrueResidueSelectorCreator
static

◆ ResidualDipolarCouplingEnergy_RohlCreator_registrator

EnergyMethodRegistrator< energy_methods::ResidualDipolarCouplingEnergy_RohlCreator > core::init::ResidualDipolarCouplingEnergy_RohlCreator_registrator
static

◆ ResidualDipolarCouplingEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::ResidualDipolarCouplingEnergyCreator > core::init::ResidualDipolarCouplingEnergyCreator_registrator
static

◆ ResidueHasPropertyCreator_registrator

ResFilterRegistrator< ResidueHasPropertyCreator > core::init::ResidueHasPropertyCreator_registrator
static

◆ ResidueIndexIsCreator_registrator

ResFilterRegistrator< ResidueIndexIsCreator > core::init::ResidueIndexIsCreator_registrator
static

◆ ResidueIndexIsntCreator_registrator

ResFilterRegistrator< ResidueIndexIsntCreator > core::init::ResidueIndexIsntCreator_registrator
static

◆ ResidueLacksPropertyCreator_registrator

ResFilterRegistrator< ResidueLacksPropertyCreator > core::init::ResidueLacksPropertyCreator_registrator
static

◆ ResidueName3IsCreator_registrator

ResFilterRegistrator< ResidueName3IsCreator > core::init::ResidueName3IsCreator_registrator
static

◆ ResidueName3IsntCreator_registrator

ResFilterRegistrator< ResidueName3IsntCreator > core::init::ResidueName3IsntCreator_registrator
static

◆ ResiduePDBInfoHasLabelCreator_registrator

ResFilterRegistrator< ResiduePDBInfoHasLabelCreator > core::init::ResiduePDBInfoHasLabelCreator_registrator
static

◆ ResidueTypeResFilterCreator_registrator

ResFilterRegistrator< ResidueTypeFilterCreator > core::init::ResidueTypeResFilterCreator_registrator
static

◆ restore_sc12_settings

pre_talaris_2013_behavior_settings const core::init::restore_sc12_settings

◆ RestrictAbsentCanonicalAASCreator_registrator

TaskOperationRegistrator< RestrictAbsentCanonicalAASCreator > core::init::RestrictAbsentCanonicalAASCreator_registrator
static

◆ RestrictAbsentCanonicalAASExceptNativeRLTCreator_registrator

ResLvlTaskOperationRegistrator< RestrictAbsentCanonicalAASExceptNativeRLTCreator > core::init::RestrictAbsentCanonicalAASExceptNativeRLTCreator_registrator
static

◆ RestrictAbsentCanonicalAASRLTCreator_registrator

ResLvlTaskOperationRegistrator< RestrictAbsentCanonicalAASRLTCreator > core::init::RestrictAbsentCanonicalAASRLTCreator_registrator
static

◆ RestrictInteractionGraphThreadsOperationCreator_registrator

TaskOperationRegistrator< RestrictInteractionGraphThreadsOperationCreator > core::init::RestrictInteractionGraphThreadsOperationCreator_registrator
static

◆ RestrictResidueToRepackingCreator_registrator

TaskOperationRegistrator< RestrictResidueToRepackingCreator > core::init::RestrictResidueToRepackingCreator_registrator
static

◆ RestrictToRepackingCreator_registrator

TaskOperationRegistrator< RestrictToRepackingCreator > core::init::RestrictToRepackingCreator_registrator
static

◆ RestrictToRepackingRLTCreator_registrator

ResLvlTaskOperationRegistrator< RestrictToRepackingRLTCreator > core::init::RestrictToRepackingRLTCreator_registrator
static

◆ RestrictToResiduePropertiesCreator_registrator

TaskOperationRegistrator< RestrictToResiduePropertiesCreator > core::init::RestrictToResiduePropertiesCreator_registrator
static

◆ RestrictToSpecifiedBaseResidueTypesCreator_registrator

TaskOperationRegistrator< RestrictToSpecifiedBaseResidueTypesCreator > core::init::RestrictToSpecifiedBaseResidueTypesCreator_registrator
static

◆ RestrictYSDesignCreator_registrator

TaskOperationRegistrator< RestrictYSDesignCreator > core::init::RestrictYSDesignCreator_registrator
static

◆ RG_Energy_FastCreator_registrator

EnergyMethodRegistrator< energy_methods::RG_Energy_FastCreator > core::init::RG_Energy_FastCreator_registrator
static

◆ RG_Energy_RNACreator_registrator

EnergyMethodRegistrator< energy_methods::RG_Energy_RNACreator > core::init::RG_Energy_RNACreator_registrator
static

◆ RG_LocalEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::RG_LocalEnergyCreator > core::init::RG_LocalEnergyCreator_registrator
static

◆ RigidBodySilentStructCreator_registrator

SilentStructRegistrator< core::io::silent::RigidBodySilentStructCreator > core::init::RigidBodySilentStructCreator_registrator
static

◆ RingClosureEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::RingClosureEnergyCreator > core::init::RingClosureEnergyCreator_registrator
static

◆ RMS_EnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::RMS_EnergyCreator > core::init::RMS_EnergyCreator_registrator
static

◆ RNA_BulgeEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::RNA_BulgeEnergyCreator > core::init::RNA_BulgeEnergyCreator_registrator
static

◆ RNA_ChemicalMappingEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::RNA_ChemicalMappingEnergyCreator > core::init::RNA_ChemicalMappingEnergyCreator_registrator
static

◆ RNA_CoarseDistEnergyCreator_registrator

EnergyMethodRegistrator< core::energy_methods::RNA_CoarseDistEnergyCreator > core::init::RNA_CoarseDistEnergyCreator_registrator
static

◆ RNA_DataBackboneEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::RNA_DataBackboneEnergyCreator > core::init::RNA_DataBackboneEnergyCreator_registrator
static

◆ RNA_FA_ElecEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::RNA_FA_ElecEnergyCreator > core::init::RNA_FA_ElecEnergyCreator_registrator
static

◆ RNA_FullAtomStackingEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::RNA_FullAtomStackingEnergyCreator > core::init::RNA_FullAtomStackingEnergyCreator_registrator
static

◆ RNA_FullAtomVDW_BasePhosphateCreator_registrator

EnergyMethodRegistrator< energy_methods::RNA_FullAtomVDW_BasePhosphateCreator > core::init::RNA_FullAtomVDW_BasePhosphateCreator_registrator
static

◆ RNA_JR_SuiteEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::RNA_JR_SuiteEnergyCreator > core::init::RNA_JR_SuiteEnergyCreator_registrator
static

◆ RNA_LJ_BaseEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::RNA_LJ_BaseEnergyCreator > core::init::RNA_LJ_BaseEnergyCreator_registrator
static

◆ RNA_MgPointEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::RNA_MgPointEnergyCreator > core::init::RNA_MgPointEnergyCreator_registrator
static

◆ RNA_PairwiseLowResolutionEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::RNA_PairwiseLowResolutionEnergyCreator > core::init::RNA_PairwiseLowResolutionEnergyCreator_registrator
static

◆ RNA_PartitionEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::RNA_PartitionEnergyCreator > core::init::RNA_PartitionEnergyCreator_registrator
static

◆ RNA_SilentStructCreator_registrator

SilentStructRegistrator< core::io::silent::RNA_SilentStructCreator > core::init::RNA_SilentStructCreator_registrator
static

◆ RNA_StubCoordinateEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::RNA_StubCoordinateEnergyCreator > core::init::RNA_StubCoordinateEnergyCreator_registrator
static

◆ RNA_SugarCloseEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::RNA_SugarCloseEnergyCreator > core::init::RNA_SugarCloseEnergyCreator_registrator
static

◆ RNA_SuiteEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::RNA_SuiteEnergyCreator > core::init::RNA_SuiteEnergyCreator_registrator
static

◆ RNA_TorsionEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::RNA_TorsionEnergyCreator > core::init::RNA_TorsionEnergyCreator_registrator
static

◆ RNA_VDW_EnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::RNA_VDW_EnergyCreator > core::init::RNA_VDW_EnergyCreator_registrator
static

◆ RNP_LowResEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::RNP_LowResEnergyCreator > core::init::RNP_LowResEnergyCreator_registrator
static

◆ RNP_LowResPairDistEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::RNP_LowResPairDistEnergyCreator > core::init::RNP_LowResPairDistEnergyCreator_registrator
static

◆ RNP_LowResStackEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::RNP_LowResStackEnergyCreator > core::init::RNP_LowResStackEnergyCreator_registrator
static

◆ RotamerExplosionCreator_registrator

TaskOperationRegistrator< RotamerExplosionCreator > core::init::RotamerExplosionCreator_registrator
static

◆ SA_EnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::SA_EnergyCreator > core::init::SA_EnergyCreator_registrator
static

◆ SapConstraintEnergyCreator_registrator

EnergyMethodRegistrator< pack::guidance_scoreterms::sap::SapConstraintEnergyCreator > core::init::SapConstraintEnergyCreator_registrator
static

◆ SASAEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::SASAEnergyCreator > core::init::SASAEnergyCreator_registrator
static

◆ SAXSEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::SAXSEnergyCreator > core::init::SAXSEnergyCreator_registrator
static

◆ SAXSEnergyCreatorCEN_registrator

EnergyMethodRegistrator< energy_methods::SAXSEnergyCreatorCEN > core::init::SAXSEnergyCreatorCEN_registrator
static

◆ SAXSEnergyCreatorFA_registrator

EnergyMethodRegistrator< energy_methods::SAXSEnergyCreatorFA > core::init::SAXSEnergyCreatorFA_registrator
static

◆ ScoreFileSilentStructCreator_registrator

SilentStructRegistrator< core::io::silent::ScoreFileSilentStructCreator > core::init::ScoreFileSilentStructCreator_registrator
static

◆ ScoreJumpFileSilentStructCreator_registrator

SilentStructRegistrator< core::io::silent::ScoreJumpFileSilentStructCreator > core::init::ScoreJumpFileSilentStructCreator_registrator
static

◆ SecondaryStructureEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::SecondaryStructureEnergyCreator > core::init::SecondaryStructureEnergyCreator_registrator
static

◆ SequenceCouplingCreator_registrator

SequenceRegistrator< core::sequence::SequenceCouplingCreator > core::init::SequenceCouplingCreator_registrator
static

◆ SequenceProfileConstraintCreator_registrator

ConstraintRegistrator< core::scoring::constraints::SequenceProfileConstraintCreator > core::init::SequenceProfileConstraintCreator_registrator
static

◆ SequenceProfileCreator_registrator

SequenceRegistrator< core::sequence::SequenceProfileCreator > core::init::SequenceProfileCreator_registrator
static

◆ SetRotamerCouplingsCreator_registrator

TaskOperationRegistrator< SetRotamerCouplingsCreator > core::init::SetRotamerCouplingsCreator_registrator
static

◆ SetRotamerLinksCreator_registrator

TaskOperationRegistrator< SetRotamerLinksCreator > core::init::SetRotamerLinksCreator_registrator
static

◆ SimpleSequenceCreator_registrator

SequenceRegistrator< core::sequence::SimpleSequenceCreator > core::init::SimpleSequenceCreator_registrator
static

◆ SingleBasicRotamerLibraryCreator_registrator

SingleResidueRotamerLibraryRegistrator< pack::rotamers::SingleBasicRotamerLibraryCreator > core::init::SingleBasicRotamerLibraryCreator_registrator
static

◆ SingleCenrotRotamerLibraryCreator_registrator

SingleResidueRotamerLibraryRegistrator< pack::dunbrack::cenrot::SingleResidueCenrotLibraryCreator > core::init::SingleCenrotRotamerLibraryCreator_registrator
static

◆ SingleLigandRotamerLibraryCreator_registrator

SingleResidueRotamerLibraryRegistrator< pack::rotamers::SingleLigandRotamerLibraryCreator > core::init::SingleLigandRotamerLibraryCreator_registrator
static

◆ SingleNCAARotamerLibraryCreator_registrator

SingleResidueRotamerLibraryRegistrator< pack::rotamers::SingleNCAARotamerLibraryCreator > core::init::SingleNCAARotamerLibraryCreator_registrator
static

◆ SingleResidueDunbrackLibraryCreator_registrator

SingleResidueRotamerLibraryRegistrator< pack::dunbrack::SingleResidueDunbrackLibraryCreator > core::init::SingleResidueDunbrackLibraryCreator_registrator
static

◆ SiteConstraintCreator_registrator

ConstraintRegistrator< core::scoring::constraints::SiteConstraintCreator > core::init::SiteConstraintCreator_registrator
static

◆ SiteConstraintResiduesCreator_registrator

ConstraintRegistrator< core::scoring::constraints::SiteConstraintResiduesCreator > core::init::SiteConstraintResiduesCreator_registrator
static

◆ SmoothCenPairEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::SmoothCenPairEnergyCreator > core::init::SmoothCenPairEnergyCreator_registrator
static

◆ SmoothEnvEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::SmoothEnvEnergyCreator > core::init::SmoothEnvEnergyCreator_registrator
static

◆ SplitUnfoldedTwoBodyEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::SplitUnfoldedTwoBodyEnergyCreator > core::init::SplitUnfoldedTwoBodyEnergyCreator_registrator
static

◆ SSElementMotifContactEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::SSElementMotifContactEnergyCreator > core::init::SSElementMotifContactEnergyCreator_registrator
static

◆ StackElecEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::StackElecEnergyCreator > core::init::StackElecEnergyCreator_registrator
static

◆ StoredRotamerLibraryCreator_registrator

SingleResidueRotamerLibraryRegistrator< pack::rotamers::StoredRotamerLibraryCreator > core::init::StoredRotamerLibraryCreator_registrator
static

◆ SuckerEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::SuckerEnergyCreator > core::init::SuckerEnergyCreator_registrator
static

◆ SugarBackboneEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::SugarBackboneEnergyCreator > core::init::SugarBackboneEnergyCreator_registrator
static

◆ SurfaceEnergyCreator_registrator

EnergyMethodRegistrator< pack::interaction_graph::SurfaceEnergyCreator > core::init::SurfaceEnergyCreator_registrator
static

◆ SurfEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::SurfEnergyCreator > core::init::SurfEnergyCreator_registrator
static

◆ SurfVolEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::SurfVolEnergyCreator > core::init::SurfVolEnergyCreator_registrator
static

◆ symECreator_registrator

EnergyMethodRegistrator< scoring::sym_e::symECreator > core::init::symECreator_registrator
static

◆ SymmDataLoaderCreator_registrator

ResourceLoaderRegistrator< core::conformation::symmetry::SymmDataLoaderCreator > core::init::SymmDataLoaderCreator_registrator
static

◆ SymmetricLigandEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::SymmetricLigandEnergyCreator > core::init::SymmetricLigandEnergyCreator_registrator
static

◆ TNA_SuiteEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::TNA_SuiteEnergyCreator > core::init::TNA_SuiteEnergyCreator_registrator
static

◆ UnfoldedStateEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::UnfoldedStateEnergyCreator > core::init::UnfoldedStateEnergyCreator_registrator
static

◆ UseMultiCoolAnnealerCreator_registrator

TaskOperationRegistrator< UseMultiCoolAnnealerCreator > core::init::UseMultiCoolAnnealerCreator_registrator
static

◆ VDW_EnergyCreator_registrator

EnergyMethodRegistrator< scoring::vdwaals::VDW_EnergyCreator > core::init::VDW_EnergyCreator_registrator
static

◆ VdWTinkerEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::VdWTinkerEnergyCreator > core::init::VdWTinkerEnergyCreator_registrator
static

◆ VoidsPenaltyEnergyCreator_registrator

◆ WaterAdductHBondEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::WaterAdductHBondEnergyCreator > core::init::WaterAdductHBondEnergyCreator_registrator
static

◆ WaterAdductIntraEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::WaterAdductIntraEnergyCreator > core::init::WaterAdductIntraEnergyCreator_registrator
static

◆ WaterSpecificEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::WaterSpecificEnergyCreator > core::init::WaterSpecificEnergyCreator_registrator
static

◆ XtalMLEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::XtalMLEnergyCreator > core::init::XtalMLEnergyCreator_registrator
static

◆ YYHPlanarityEnergyCreator_registrator

EnergyMethodRegistrator< energy_methods::YHHPlanarityEnergyCreator > core::init::YYHPlanarityEnergyCreator_registrator
static