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CCDLoopClosureMover.hh File Reference

Class definition and method declarations for CCDLoopClosureMover. More...

#include <protocols/loops/loop_closure/ccd/CCDLoopClosureMover.fwd.hh>
#include <protocols/moves/Mover.hh>
#include <protocols/loops/Loop.hh>
#include <protocols/loops/loop_closure/ccd/RamaCheck.fwd.hh>
#include <core/types.hh>
#include <core/id/TorsionID.fwd.hh>
#include <core/conformation/Residue.fwd.hh>
#include <core/kinematics/MoveMap.fwd.hh>
#include <string>

Classes

class  protocols::loops::loop_closure::ccd::CCDLoopClosureMover
 Close a loop (protein or otherwise) using bi-directional Cyclic Coordinate Descent. More...
 

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::loops
 
 protocols::loops::loop_closure
 
 protocols::loops::loop_closure::ccd
 

Enumerations

enum  protocols::loops::loop_closure::ccd::ChainDirection { protocols::loops::loop_closure::ccd::forward = 1, protocols::loops::loop_closure::ccd::backward, protocols::loops::loop_closure::ccd::n_chain_directions = backward }
 
enum  protocols::loops::loop_closure::ccd::SecondaryStructureType { protocols::loops::loop_closure::ccd::helix = 1, protocols::loops::loop_closure::ccd::strand, protocols::loops::loop_closure::ccd::coil, protocols::loops::loop_closure::ccd::n_secondary_structure_types = coil }
 

Functions

std::ostream & protocols::loops::loop_closure::ccd::operator<< (std::ostream &os, CCDLoopClosureMover const &mover)
 

Detailed Description

Class definition and method declarations for CCDLoopClosureMover.

Author
Phil Bradley
Oliver Lange
Brian Weitzner
Labonte JWLab.nosp@m.onte.nosp@m.@jhu..nosp@m.edu

Currently contains a classic ab initio implementation of CCD closure, according to Oliver....

Note
This file is the result of a refactor of code written by Phil and later wrapped in a Mover by Oliver.