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Public Member Functions | Static Public Member Functions | Private Attributes | List of all members
protocols::task_operations::SelectByDeltaScoreOperation Class Reference

#include <SelectByDeltaScoreOperation.hh>

Inheritance diagram for protocols::task_operations::SelectByDeltaScoreOperation:
Inheritance graph
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Public Member Functions

 SelectByDeltaScoreOperation ()
 default constructor More...
 
 ~SelectByDeltaScoreOperation () override
 destructor More...
 
core::pack::task::operation::TaskOperationOP clone () const override
 make clone More...
 
void apply (core::pose::Pose const &, core::pack::task::PackerTask &) const override
 Change a packer task in some way. The input pose is the one to which the input task will be later applied. More...
 
void parse_tag (TagCOP tag, DataMap &) override
 Used to parse an xml-like tag to load parameters and properties. More...
 
core::scoring::ScoreFunctionOP scorefxn () const
 
void scorefxn (core::scoring::ScoreFunctionOP scorefxn)
 
core::scoring::ScoreType score_type () const
 
void score_type (core::scoring::ScoreType const st)
 
std::string score_type_name () const
 
void score_type_name (std::string const &name)
 
core::Real threshold () const
 
void threshold (core::Real const threshold)
 
bool lower () const
 
void lower (bool const lower)
 
core::pose::PoseOP reference_pose () const
 
void reference_pose (core::pose::PoseOP const reference_pose)
 
bool individual_hbonds () const
 
void individual_hbonds (bool const individual_hbonds)
 
- Public Member Functions inherited from core::pack::task::operation::TaskOperation
 ~TaskOperation () override
 
virtual bool task_operation_provides_citation_info () const
 Does this task operation provide information about how to cite it? More...
 
virtual utility::vector1
< basic::citation_manager::CitationCollectionCOP > 
provide_citation_info () const
 Provide the citation. More...
 
virtual bool task_operation_is_unpublished () const
 Does this task_operation indicate that it is unpublished (and, by extension, that the author should be included in publications resulting from it)? More...
 
virtual utility::vector1
< basic::citation_manager::UnpublishedModuleInfoCOP > 
provide_authorship_info_for_unpublished () const
 Provide a list of authors and their e-mail addresses, as strings. More...
 

Static Public Member Functions

static void provide_xml_schema (utility::tag::XMLSchemaDefinition &xsd)
 
static std::string keyname ()
 

Private Attributes

core::scoring::ScoreFunctionOP scorefxn_
 
core::scoring::ScoreType score_type_
 
std::string score_type_name_
 
core::Real threshold_
 
bool lower_
 
bool individual_hbonds_
 
core::pose::PoseOP reference_pose_
 

Additional Inherited Members

- Public Types inherited from core::pack::task::operation::TaskOperation
typedef utility::tag::TagCOP TagCOP
 
typedef basic::datacache::DataMap DataMap
 
typedef pose::Pose Pose
 

Constructor & Destructor Documentation

protocols::task_operations::SelectByDeltaScoreOperation::SelectByDeltaScoreOperation ( )

default constructor

protocols::task_operations::SelectByDeltaScoreOperation::~SelectByDeltaScoreOperation ( )
overridedefault

destructor

Member Function Documentation

void protocols::task_operations::SelectByDeltaScoreOperation::apply ( core::pose::Pose const &  ,
core::pack::task::PackerTask  
) const
overridevirtual
core::pack::task::operation::TaskOperationOP protocols::task_operations::SelectByDeltaScoreOperation::clone ( ) const
overridevirtual
bool protocols::task_operations::SelectByDeltaScoreOperation::individual_hbonds ( ) const

References individual_hbonds_.

Referenced by individual_hbonds(), and parse_tag().

void protocols::task_operations::SelectByDeltaScoreOperation::individual_hbonds ( bool const  individual_hbonds)
static std::string protocols::task_operations::SelectByDeltaScoreOperation::keyname ( )
inlinestatic
bool protocols::task_operations::SelectByDeltaScoreOperation::lower ( ) const

References lower_.

Referenced by lower(), and parse_tag().

void protocols::task_operations::SelectByDeltaScoreOperation::lower ( bool const  lower)

References lower(), and lower_.

void protocols::task_operations::SelectByDeltaScoreOperation::parse_tag ( TagCOP  tag,
DataMap  
)
overridevirtual
void protocols::task_operations::SelectByDeltaScoreOperation::provide_xml_schema ( utility::tag::XMLSchemaDefinition &  xsd)
static
core::pose::PoseOP protocols::task_operations::SelectByDeltaScoreOperation::reference_pose ( ) const

References reference_pose_.

Referenced by reference_pose().

void protocols::task_operations::SelectByDeltaScoreOperation::reference_pose ( core::pose::PoseOP const  reference_pose)
core::scoring::ScoreType protocols::task_operations::SelectByDeltaScoreOperation::score_type ( ) const

References score_type_.

Referenced by parse_tag(), and score_type().

void protocols::task_operations::SelectByDeltaScoreOperation::score_type ( core::scoring::ScoreType const  st)

References score_type(), and score_type_.

std::string protocols::task_operations::SelectByDeltaScoreOperation::score_type_name ( ) const

References score_type_name_.

Referenced by parse_tag(), and score_type_name().

void protocols::task_operations::SelectByDeltaScoreOperation::score_type_name ( std::string const &  name)
core::scoring::ScoreFunctionOP protocols::task_operations::SelectByDeltaScoreOperation::scorefxn ( ) const

References scorefxn_.

Referenced by apply(), parse_tag(), and scorefxn().

void protocols::task_operations::SelectByDeltaScoreOperation::scorefxn ( core::scoring::ScoreFunctionOP  scorefxn)

References scorefxn(), and scorefxn_.

core::Real protocols::task_operations::SelectByDeltaScoreOperation::threshold ( ) const

References threshold_.

Referenced by parse_tag(), and threshold().

void protocols::task_operations::SelectByDeltaScoreOperation::threshold ( core::Real const  threshold)

References threshold(), and threshold_.

Member Data Documentation

bool protocols::task_operations::SelectByDeltaScoreOperation::individual_hbonds_
private

Referenced by apply(), and individual_hbonds().

bool protocols::task_operations::SelectByDeltaScoreOperation::lower_
private

Referenced by apply(), and lower().

core::pose::PoseOP protocols::task_operations::SelectByDeltaScoreOperation::reference_pose_
private

Referenced by apply(), parse_tag(), and reference_pose().

core::scoring::ScoreType protocols::task_operations::SelectByDeltaScoreOperation::score_type_
private

Referenced by apply(), and score_type().

std::string protocols::task_operations::SelectByDeltaScoreOperation::score_type_name_
private

Referenced by apply(), and score_type_name().

core::scoring::ScoreFunctionOP protocols::task_operations::SelectByDeltaScoreOperation::scorefxn_
private

Referenced by scorefxn().

core::Real protocols::task_operations::SelectByDeltaScoreOperation::threshold_
private

Referenced by apply(), and threshold().


The documentation for this class was generated from the following files: