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protocols::ligand_docking::HeavyAtomFilter Class Reference

#include <HeavyAtomFilter.hh>

Inheritance diagram for protocols::ligand_docking::HeavyAtomFilter:
Inheritance graph

Public Member Functions

 HeavyAtomFilter ()
 HeavyAtomFilter (std::string const &chain, core::Size heavy_atom_limit)
 HeavyAtomFilter (HeavyAtomFilter const &init)
 ~HeavyAtomFilter () override=default
bool apply (core::pose::Pose const &pose) const override
 Returns true if the given pose passes the filter, false otherwise. More...
protocols::filters::FilterOP clone () const override
core::Real report_sm (core::pose::Pose const &) const override
 used to report filter internals through a score or silent file More...
protocols::filters::FilterOP fresh_instance () const override
void parse_my_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &) override
 Called by FilterFactory when constructing new Filter. Takes care of the specific mover's parsing. More...
std::string name () const override
- Public Member Functions inherited from protocols::filters::Filter
 Filter ()
 Filter (std::string const &)
 Filter (Filter const &)
 ~Filter () override
virtual void report (std::ostream &, core::pose::Pose const &) const
virtual std::string get_type () const
std::string get_user_defined_name () const
void set_user_defined_name (std::string const &name)
virtual void clear ()
 used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual More...
virtual core::Real score (core::pose::Pose &pose)
virtual bool filter_provides_citation_info () const
 Does this filter provide information about how to cite it? More...
virtual utility::vector1
< basic::citation_manager::CitationCollectionCOP > 
provide_citation_info () const
 Provide the citation. More...
virtual bool filter_is_unpublished () const
 Does this filter indicate that it is unpublished (and, by extension, that the author should be included in publications resulting from it)? More...
virtual utility::vector1
< basic::citation_manager::UnpublishedModuleInfoCOP > 
provide_authorship_info_for_unpublished () const
 Provide a list of authors and their e-mail addresses, as strings. More...

Static Public Member Functions

static std::string class_name ()
static void provide_xml_schema (utility::tag::XMLSchemaDefinition &xsd)

Private Attributes

std::string chain_
core::Size heavy_atom_limit_

Additional Inherited Members

- Protected Attributes inherited from protocols::filters::Filter
std::string scorename_

Constructor & Destructor Documentation

protocols::ligand_docking::HeavyAtomFilter::HeavyAtomFilter ( )
protocols::ligand_docking::HeavyAtomFilter::HeavyAtomFilter ( std::string const &  chain,
core::Size  heavy_atom_limit 
protocols::ligand_docking::HeavyAtomFilter::HeavyAtomFilter ( HeavyAtomFilter const &  init)
protocols::ligand_docking::HeavyAtomFilter::~HeavyAtomFilter ( )

Member Function Documentation

bool protocols::ligand_docking::HeavyAtomFilter::apply ( core::pose::Pose const &  pose) const

Returns true if the given pose passes the filter, false otherwise.

Implements protocols::filters::Filter.

References heavy_atom_limit_, protocols::ligand_docking::heavy_atom_tracer(), and report_sm().

std::string protocols::ligand_docking::HeavyAtomFilter::class_name ( )
protocols::filters::FilterOP protocols::ligand_docking::HeavyAtomFilter::clone ( ) const
protocols::filters::FilterOP protocols::ligand_docking::HeavyAtomFilter::fresh_instance ( ) const
std::string protocols::ligand_docking::HeavyAtomFilter::name ( ) const

Reimplemented from protocols::filters::Filter.

References class_name().

void protocols::ligand_docking::HeavyAtomFilter::parse_my_tag ( utility::tag::TagCOP  ,
basic::datacache::DataMap &   

Called by FilterFactory when constructing new Filter. Takes care of the specific mover's parsing.

Reimplemented from protocols::filters::Filter.

References chain_, and heavy_atom_limit_.

void protocols::ligand_docking::HeavyAtomFilter::provide_xml_schema ( utility::tag::XMLSchemaDefinition &  xsd)
core::Real protocols::ligand_docking::HeavyAtomFilter::report_sm ( core::pose::Pose const &  ) const

Member Data Documentation

std::string protocols::ligand_docking::HeavyAtomFilter::chain_

Referenced by parse_my_tag(), and report_sm().

core::Size protocols::ligand_docking::HeavyAtomFilter::heavy_atom_limit_

Referenced by apply(), parse_my_tag(), and report_sm().

The documentation for this class was generated from the following files: