Rosetta
core::scoring::NeighborList Member List

This is the complete list of members for core::scoring::NeighborList, including all inherited members.

atom_needs_update_from_wide_core::scoring::NeighborListmutableprivate
atom_neighbors(int const pos, int const atomno) constcore::scoring::NeighborListinline
atom_neighbors(id::AtomID const &id) constcore::scoring::NeighborListinline
atom_pair_cutoff(bool atom1_is_hydrogen, bool atom2_is_hydrogen) constcore::scoring::NeighborListinlineprivate
atoms_to_update_core::scoring::NeighborListmutableprivate
auto_update_core::scoring::NeighborListprivate
check_domain_map(kinematics::DomainMap const &domain_map_in) constcore::scoring::NeighborList
clear()core::scoring::NeighborListinline
clone() constcore::scoring::NeighborListinline
declare_atom_neighbor_1sided(id::AtomID at1, id::AtomID at2, Size path_dist, Real weight, Real weight_func=1.0) constcore::scoring::NeighborListprotected
declare_atoms_neighbors(id::AtomID at1, id::AtomID at2, Size path_dist, Real weight, Real weight_func=1.0) constcore::scoring::NeighborListprotected
disable_auto_update()core::scoring::NeighborList
domain_map() constcore::scoring::NeighborListinline
domain_map_core::scoring::NeighborListprivate
HH_cutoff_core::scoring::NeighborListprivate
HH_cutoff_wide_core::scoring::NeighborListprivate
intrares_upper_atom_neighbors(int const pos, int const atomno) constcore::scoring::NeighborListinline
intrares_upper_atom_neighbors(id::AtomID const &id) constcore::scoring::NeighborListinline
intrares_upper_nblist_core::scoring::NeighborListmutableprivate
move_tolerance_sqr_core::scoring::NeighborListprivate
n_full_updates_core::scoring::NeighborListmutableprivate
n_prepare_for_scorings_core::scoring::NeighborListmutableprivate
n_update_from_wide_core::scoring::NeighborListmutableprivate
nblist_core::scoring::NeighborListmutableprivate
NeighborList(kinematics::DomainMap const &domain_map, Real const XX_cutoff, Real const XH_cutoff, Real const HH_cutoff)core::scoring::NeighborList
prepare_for_scoring(pose::Pose const &pose, ScoreFunction const &sfxn, T_Etable const &etable_method) constcore::scoring::NeighborList
reference_coords_core::scoring::NeighborListmutableprivate
set_auto_update(Distance move_tolerance)core::scoring::NeighborList
setup(pose::Pose const &pose, ScoreFunction const &sfxn, T_Etable const &etable_method) constcore::scoring::NeighborList
sqrt_HH_cutoff_core::scoring::NeighborListprivate
sqrt_XH_cutoff_core::scoring::NeighborListprivate
sqrt_XX_cutoff_core::scoring::NeighborListprivate
update_from_wide_nblist(pose::Pose const &pose) constcore::scoring::NeighborListprivate
upper_atom_neighbors(int const pos, int const atomno) constcore::scoring::NeighborListinline
upper_atom_neighbors(id::AtomID const &id) constcore::scoring::NeighborListinline
upper_nblist_core::scoring::NeighborListmutableprivate
wide_move_tolerance_sqr_core::scoring::NeighborListprivate
wide_nblist_core::scoring::NeighborListmutableprivate
wide_nblist_extension_core::scoring::NeighborListprivate
wide_reference_coords_core::scoring::NeighborListmutableprivate
XH_cutoff_core::scoring::NeighborListprivate
XH_cutoff_wide_core::scoring::NeighborListprivate
XX_cutoff_core::scoring::NeighborListprivate
XX_cutoff_wide_core::scoring::NeighborListprivate
~NeighborList() overridecore::scoring::NeighborList