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core::pack::task::operation::TaskOperation Class Referenceabstract

#include <TaskOperation.hh>

Inherits VirtualBase.

Inherited by core::pack::task::operation::AppendResidueRotamerSet, core::pack::task::operation::AppendRotamer, core::pack::task::operation::AppendRotamerSet, core::pack::task::operation::ClashBasedRepackShell, core::pack::task::operation::DesignRestrictions, core::pack::task::operation::DisallowIfNonnative, core::pack::task::operation::EnableMultiCoolAnnealer, core::pack::task::operation::EnableSmartAnnealer, core::pack::task::operation::ExtraChiCutoff, core::pack::task::operation::ExtraRotamers, core::pack::task::operation::ExtraRotamersGeneric, core::pack::task::operation::FillAUTOTaskOperation, core::pack::task::operation::IncludeCurrent, core::pack::task::operation::InitializeExtraRotsFromCommandline, core::pack::task::operation::InitializeFromCommandline, core::pack::task::operation::InitializeFromOptionCollection, core::pack::task::operation::KeepSequenceSymmetry, core::pack::task::operation::NoRepackDisulfides, core::pack::task::operation::OperateOnCertainResidues, core::pack::task::operation::OperateOnResidueSubset, core::pack::task::operation::OptCysHG, core::pack::task::operation::OptH, core::pack::task::operation::PreserveCBeta, core::pack::task::operation::PreventRepacking, core::pack::task::operation::ProhibitResidueProperties, core::pack::task::operation::ProhibitSpecifiedBaseResidueTypes, core::pack::task::operation::ReadResfile, core::pack::task::operation::ReplicateTask, core::pack::task::operation::RestrictAbsentCanonicalAAS, core::pack::task::operation::RestrictInteractionGraphThreadsOperation, core::pack::task::operation::RestrictResidueToRepacking, core::pack::task::operation::RestrictToRepacking, core::pack::task::operation::RestrictToResidueProperties, core::pack::task::operation::RestrictToSpecifiedBaseResidueTypes, core::pack::task::operation::RestrictYSDesign, core::pack::task::operation::RotamerExplosion, core::pack::task::operation::SetRotamerCouplings, core::pack::task::operation::SetRotamerLinks, core::pack::task::operation::UseMultiCoolAnnealer, protocols::antibody::task_operations::AddCDRProfileSetsOperation, protocols::antibody::task_operations::AddCDRProfilesOperation, protocols::antibody::task_operations::DisableAntibodyRegionOperation, protocols::antibody::task_operations::DisableCDRsOperation, protocols::antibody::task_operations::RestrictToCDRsAndNeighbors, protocols::denovo_design::task_operations::ConsensusLoopDesignOperation, protocols::dna::RestrictDesignToProteinDNAInterface, protocols::dna::WatsonCrickRotamerCouplings, protocols::enzdes::AddLigandMotifRotamers, protocols::enzdes::AddRigidBodyLigandConfs, protocols::enzdes::DetectProteinLigandInterface, protocols::enzdes::ProteinLigandInterfaceUpweighter, protocols::enzdes::SetCatalyticResPackBehavior, protocols::flxbb::CombinedTaskOperation, protocols::flxbb::LayerDesignOperation, protocols::forge::remodel::RemodelRotamerLinks, protocols::hbnet::ConstrainHBondNetwork, protocols::hotspot_hashing::AddSearchPatternRotSetOp, protocols::legacy_sewing::LegacyReadNativeRotamersFile, protocols::matdes::BuildingBlockInterfaceOperation, protocols::optimize_weights::ScaleAnnealerTemperatureOperation, protocols::pack_interface::ProteinProteinInterfaceUpweighter, protocols::simple_task_operations::DockingNoRepack1, protocols::simple_task_operations::DockingNoRepack2, protocols::simple_task_operations::InterfaceTaskOperation, protocols::simple_task_operations::RestrictToLoops, protocols::splice::SampleRotamersFromPDB, protocols::symmetric_docking::SymRestrictTaskForDocking, protocols::task_operations::ConservativeDesignOperation, protocols::task_operations::CrystalContactsOperation, protocols::task_operations::DsspDesignOperation, protocols::task_operations::ImportUnboundRotamersOperation, protocols::task_operations::InteractingRotamerExplosion, protocols::task_operations::JointSequenceOperation, protocols::task_operations::LimitAromaChi2Operation, protocols::task_operations::LinkResidues, protocols::task_operations::ModifyAnnealer, protocols::task_operations::MutationSetDesignOperation, protocols::task_operations::pHVariantTaskOperation, protocols::task_operations::PruneBuriedUnsatsOperation, protocols::task_operations::ReadResfileFromDB, protocols::task_operations::ResfileCommandOperation, protocols::task_operations::ResidueProbDesignOperation, protocols::task_operations::RestrictIdentitiesOperation, protocols::task_operations::RestrictInterGroupVectorOperation, protocols::task_operations::RestrictNativeResiduesOperation, protocols::task_operations::RestrictNonSurfaceToRepackingOperation, protocols::task_operations::RestrictOperationsBase, protocols::task_operations::RestrictToCDRH3Loop, protocols::task_operations::RestrictToMoveMapChiOperation, protocols::task_operations::RestrictToTerminiOperation, protocols::task_operations::RetrieveStoredTaskOperation, protocols::task_operations::SelectByDeltaScoreOperation, protocols::task_operations::SelectByDensityFitOperation, protocols::task_operations::SelectBySASAOperation, protocols::task_operations::SeqprofConsensusOperation, protocols::task_operations::SequenceMotifTaskOperation, and protocols::task_operations::SetIGTypeOperation.

Public Types

typedef utility::tag::TagCOP TagCOP
 
typedef basic::datacache::DataMap DataMap
 
typedef pose::Pose Pose
 

Public Member Functions

 ~TaskOperation () override
 
virtual TaskOperationOP clone () const =0
 Create another task operation of the type matching the most-derived version of the class. More...
 
virtual void apply (Pose const &, PackerTask &) const =0
 Change a packer task in some way. The input pose is the one to which the input task will be later applied. More...
 
virtual void parse_tag (TagCOP, DataMap &)
 Used to parse an xml-like tag to load parameters and properties. More...
 
virtual void provide_citation_info (basic::citation_manager::CitationCollectionList &) const
 Provide citations to the passed CitationCollectionList Subclasses should add the info for themselves and any other classes they use. More...
 

Member Typedef Documentation

typedef basic::datacache::DataMap core::pack::task::operation::TaskOperation::DataMap

Constructor & Destructor Documentation

core::pack::task::operation::TaskOperation::~TaskOperation ( )
overridedefault

Member Function Documentation

virtual void core::pack::task::operation::TaskOperation::apply ( Pose const &  ,
PackerTask  
) const
pure virtual

Change a packer task in some way. The input pose is the one to which the input task will be later applied.

Implemented in core::pack::task::operation::ExtraChiCutoff, core::pack::task::operation::ExtraRotamers, core::pack::task::operation::RestrictYSDesign, core::pack::task::operation::PreventRepacking, core::pack::task::operation::PreserveCBeta, core::pack::task::operation::AppendResidueRotamerSet, core::pack::task::operation::AppendRotamerSet, core::pack::task::operation::AppendRotamer, core::pack::task::operation::SetRotamerLinks, core::pack::task::operation::SetRotamerCouplings, core::pack::task::operation::ReadResfileAndObeyLengthEvents, core::pack::task::operation::ReadResfile, core::pack::task::operation::ExtraRotamersGeneric, core::pack::task::operation::IncludeCurrent, core::pack::task::operation::InitializeExtraRotsFromCommandline, core::pack::task::operation::InitializeFromOptionCollection, core::pack::task::operation::UseMultiCoolAnnealer, core::pack::task::operation::InitializeFromCommandline, core::pack::task::operation::RotamerExplosion, protocols::flxbb::CombinedTaskOperation, core::pack::task::operation::DisallowIfNonnative, protocols::enzdes::AddLigandMotifRotamers, core::pack::task::operation::RestrictAbsentCanonicalAAS, protocols::enzdes::AddRigidBodyLigandConfs, core::pack::task::operation::RestrictResidueToRepacking, protocols::flxbb::LayerDesignOperation, core::pack::task::operation::RestrictToRepacking, protocols::enzdes::ProteinLigandInterfaceUpweighter, protocols::denovo_design::task_operations::ConsensusLoopDesignOperation, protocols::splice::SampleRotamersFromPDB, protocols::task_operations::LimitAromaChi2Operation, core::pack::task::operation::ProhibitResidueProperties, protocols::optimize_weights::ScaleAnnealerTemperatureOperation, protocols::task_operations::RestrictConservedLowDdgOperation, protocols::simple_task_operations::RestrictToInterface, core::pack::task::operation::RestrictToResidueProperties, protocols::task_operations::PruneBuriedUnsatsOperation, core::pack::task::operation::DesignRestrictions, protocols::task_operations::DsspDesignOperation, core::pack::task::operation::ProhibitSpecifiedBaseResidueTypes, protocols::antibody::task_operations::AddCDRProfilesOperation, protocols::simple_task_operations::DockingNoRepack2, protocols::enzdes::DetectProteinLigandInterface, protocols::antibody::task_operations::RestrictToCDRsAndNeighbors, protocols::legacy_sewing::LegacyReadRepeatNativeRotamersFile, protocols::task_operations::RestrictInterGroupVectorOperation, protocols::antibody::task_operations::AddCDRProfileSetsOperation, protocols::task_operations::RestrictToInterfaceVectorOperation, protocols::task_operations::RestrictToMoveMapChiOperation, protocols::hotspot_hashing::AddSearchPatternRotSetOp, protocols::simple_task_operations::DockingNoRepack1, protocols::task_operations::ImportUnboundRotamersOperation, protocols::antibody::task_operations::DisableCDRsOperation, protocols::task_operations::SeqprofConsensusOperation, core::pack::task::operation::ClashBasedRepackShell, core::pack::task::operation::OptH, protocols::antibody::task_operations::DisableAntibodyRegionOperation, core::pack::task::operation::RestrictToSpecifiedBaseResidueTypes, core::pack::task::operation::OptCysHG, core::pack::task::operation::RestrictInteractionGraphThreadsOperation, core::pack::task::operation::NoRepackDisulfides, protocols::task_operations::JointSequenceOperation, protocols::task_operations::ProteinInterfaceDesignOperation, protocols::task_operations::RestrictToNeighborhoodOperation, core::pack::task::operation::OperateOnResidueSubset, protocols::task_operations::SequenceMotifTaskOperation, protocols::simple_task_operations::RestrictToLoops, protocols::task_operations::RestrictNativeResiduesOperation, core::pack::task::operation::OperateOnCertainResidues, protocols::task_operations::MutationSetDesignOperation, protocols::task_operations::ResidueProbDesignOperation, protocols::simple_task_operations::RestrictToLoopsAndNeighbors, protocols::task_operations::LinkResidues, protocols::task_operations::ResfileCommandOperation, protocols::task_operations::RestrictToTerminiOperation, core::pack::task::operation::ReplicateTask, protocols::splice::DesignInterfacesOperation, protocols::task_operations::DesignAroundOperation, protocols::task_operations::PreventResiduesFromRepackingOperation, protocols::task_operations::ReadResfileFromDB, protocols::task_operations::RestrictResiduesToRepackingOperation, protocols::task_operations::RestrictIdentitiesOperation, protocols::task_operations::ThreadSequenceOperation, protocols::enzdes::SetCatalyticResPackBehavior, protocols::matdes::BuildingBlockInterfaceOperation, protocols::task_operations::ConservativeDesignOperation, core::pack::task::operation::EnableMultiCoolAnnealer, core::pack::task::operation::EnableSmartAnnealer, protocols::pack_interface::ProteinProteinInterfaceUpweighter, protocols::task_operations::CrystalContactsOperation, protocols::task_operations::RestrictToInterfaceOperation, core::pack::task::operation::FillAUTOTaskOperation, core::pack::task::operation::KeepSequenceSymmetry, protocols::task_operations::pHVariantTaskOperation, protocols::task_operations::PreventChainFromRepackingOperation, protocols::hbnet::ConstrainHBondNetwork, protocols::task_operations::AlignedThreadOperation, protocols::task_operations::InteractingRotamerExplosion, protocols::task_operations::RestrictToAlignedSegmentsOperation, protocols::task_operations::RestrictToCDRH3Loop, protocols::dna::RestrictDesignToProteinDNAInterface, protocols::task_operations::RestrictByCalculatorsOperation, protocols::task_operations::RestrictIdentitiesAtAlignedPositionsOperation, protocols::task_operations::RestrictNonSurfaceToRepackingOperation, protocols::task_operations::RestrictChainToRepackingOperation, protocols::task_operations::RetrieveStoredTaskOperation, protocols::task_operations::SelectResiduesWithinChainOperation, protocols::legacy_sewing::LegacyReadNativeRotamersFile, protocols::splice::FindEndpointsOperation, protocols::task_operations::DatabaseThread, protocols::task_operations::ModifyAnnealer, protocols::task_operations::SelectByDeltaScoreOperation, protocols::task_operations::SetIGTypeOperation, protocols::task_operations::SelectByDensityFitOperation, protocols::task_operations::SelectBySASAOperation, protocols::symmetric_docking::SymRestrictTaskForDocking, protocols::task_operations::RestrictOperationsBase, protocols::dna::WatsonCrickRotamerCouplings, and protocols::forge::remodel::RemodelRotamerLinks.

virtual TaskOperationOP core::pack::task::operation::TaskOperation::clone ( ) const
pure virtual

Create another task operation of the type matching the most-derived version of the class.

Implemented in core::pack::task::operation::ExtraChiCutoff, core::pack::task::operation::ExtraRotamers, core::pack::task::operation::RestrictYSDesign, core::pack::task::operation::PreventRepacking, core::pack::task::operation::PreserveCBeta, core::pack::task::operation::AppendResidueRotamerSet, core::pack::task::operation::AppendRotamerSet, core::pack::task::operation::AppendRotamer, core::pack::task::operation::SetRotamerLinks, core::pack::task::operation::SetRotamerCouplings, core::pack::task::operation::ReadResfileAndObeyLengthEvents, core::pack::task::operation::ReadResfile, core::pack::task::operation::ExtraRotamersGeneric, core::pack::task::operation::IncludeCurrent, core::pack::task::operation::InitializeExtraRotsFromCommandline, core::pack::task::operation::InitializeFromOptionCollection, core::pack::task::operation::UseMultiCoolAnnealer, core::pack::task::operation::InitializeFromCommandline, core::pack::task::operation::RotamerExplosion, protocols::flxbb::CombinedTaskOperation, core::pack::task::operation::DisallowIfNonnative, protocols::enzdes::AddLigandMotifRotamers, core::pack::task::operation::RestrictAbsentCanonicalAAS, core::pack::task::operation::RestrictResidueToRepacking, protocols::enzdes::AddRigidBodyLigandConfs, core::pack::task::operation::RestrictToRepacking, protocols::denovo_design::task_operations::ConsensusLoopDesignOperation, protocols::enzdes::ProteinLigandInterfaceUpweighter, protocols::splice::SampleRotamersFromPDB, core::pack::task::operation::ProhibitResidueProperties, protocols::optimize_weights::ScaleAnnealerTemperatureOperation, protocols::task_operations::ResidueProbDesignOperation, protocols::task_operations::RestrictConservedLowDdgOperation, protocols::simple_task_operations::RestrictToInterface, core::pack::task::operation::RestrictToResidueProperties, protocols::task_operations::LimitAromaChi2Operation, protocols::task_operations::MutationSetDesignOperation, protocols::flxbb::LayerDesignOperation, protocols::task_operations::PruneBuriedUnsatsOperation, core::pack::task::operation::ProhibitSpecifiedBaseResidueTypes, protocols::task_operations::ConservativeDesignOperation, core::pack::task::operation::DesignRestrictions, protocols::simple_task_operations::DockingNoRepack2, protocols::enzdes::DetectProteinLigandInterface, protocols::legacy_sewing::LegacyReadRepeatNativeRotamersFile, protocols::antibody::task_operations::AddCDRProfilesOperation, protocols::task_operations::RestrictToInterfaceVectorOperation, protocols::task_operations::RestrictToMoveMapChiOperation, protocols::hotspot_hashing::AddSearchPatternRotSetOp, protocols::simple_task_operations::DockingNoRepack1, protocols::antibody::task_operations::RestrictToCDRsAndNeighbors, protocols::task_operations::DsspDesignOperation, protocols::task_operations::RestrictInterGroupVectorOperation, protocols::task_operations::ImportUnboundRotamersOperation, core::pack::task::operation::ClashBasedRepackShell, core::pack::task::operation::RestrictToSpecifiedBaseResidueTypes, core::pack::task::operation::OptH, protocols::antibody::task_operations::AddCDRProfileSetsOperation, protocols::task_operations::SeqprofConsensusOperation, core::pack::task::operation::OperateOnResidueSubset, core::pack::task::operation::OptCysHG, protocols::task_operations::ProteinInterfaceDesignOperation, protocols::task_operations::RestrictToNeighborhoodOperation, core::pack::task::operation::NoRepackDisulfides, protocols::antibody::task_operations::DisableCDRsOperation, core::pack::task::operation::OperateOnCertainResidues, protocols::antibody::task_operations::DisableAntibodyRegionOperation, protocols::task_operations::JointSequenceOperation, protocols::task_operations::LinkResidues, protocols::task_operations::RestrictNativeResiduesOperation, protocols::task_operations::RestrictToTerminiOperation, core::pack::task::operation::ReplicateTask, core::pack::task::operation::RestrictInteractionGraphThreadsOperation, protocols::task_operations::DesignAroundOperation, protocols::task_operations::PreventResiduesFromRepackingOperation, protocols::task_operations::ReadResfileFromDB, protocols::task_operations::RestrictResiduesToRepackingOperation, protocols::splice::DesignInterfacesOperation, protocols::simple_task_operations::RestrictToLoopsAndNeighbors, protocols::task_operations::SequenceMotifTaskOperation, protocols::enzdes::SetCatalyticResPackBehavior, protocols::matdes::BuildingBlockInterfaceOperation, protocols::task_operations::CrystalContactsOperation, protocols::task_operations::InteractingRotamerExplosion, protocols::task_operations::RestrictToInterfaceOperation, protocols::hbnet::ConstrainHBondNetwork, protocols::pack_interface::ProteinProteinInterfaceUpweighter, protocols::simple_task_operations::RestrictToLoops, protocols::task_operations::PreventChainFromRepackingOperation, protocols::task_operations::ThreadSequenceOperation, protocols::dna::RestrictDesignToProteinDNAInterface, protocols::task_operations::AlignedThreadOperation, protocols::task_operations::RestrictNonSurfaceToRepackingOperation, protocols::task_operations::RestrictToAlignedSegmentsOperation, protocols::task_operations::RestrictToCDRH3Loop, protocols::task_operations::RestrictByCalculatorsOperation, protocols::task_operations::RestrictIdentitiesAtAlignedPositionsOperation, protocols::task_operations::ResfileCommandOperation, protocols::task_operations::RestrictChainToRepackingOperation, protocols::task_operations::DatabaseThread, protocols::task_operations::RetrieveStoredTaskOperation, protocols::task_operations::SelectResiduesWithinChainOperation, protocols::legacy_sewing::LegacyReadNativeRotamersFile, protocols::task_operations::ModifyAnnealer, protocols::task_operations::RestrictIdentitiesOperation, protocols::task_operations::SelectByDeltaScoreOperation, protocols::splice::FindEndpointsOperation, protocols::task_operations::SetIGTypeOperation, core::pack::task::operation::EnableMultiCoolAnnealer, core::pack::task::operation::EnableSmartAnnealer, core::pack::task::operation::FillAUTOTaskOperation, core::pack::task::operation::KeepSequenceSymmetry, protocols::symmetric_docking::SymRestrictTaskForDocking, protocols::task_operations::SelectByDensityFitOperation, protocols::task_operations::SelectBySASAOperation, protocols::task_operations::pHVariantTaskOperation, protocols::task_operations::RestrictOperationsBase, protocols::dna::WatsonCrickRotamerCouplings, and protocols::forge::remodel::RemodelRotamerLinks.

void core::pack::task::operation::TaskOperation::parse_tag ( TagCOP  tag,
DataMap  
)
virtual

Used to parse an xml-like tag to load parameters and properties.

Reimplemented in core::pack::task::operation::ExtraChiCutoff, core::pack::task::operation::ExtraRotamers, core::pack::task::operation::PreventRepacking, core::pack::task::operation::ReadResfileAndObeyLengthEvents, core::pack::task::operation::ReadResfile, core::pack::task::operation::ExtraRotamersGeneric, core::pack::task::operation::InitializeFromOptionCollection, core::pack::task::operation::UseMultiCoolAnnealer, core::pack::task::operation::InitializeFromCommandline, core::pack::task::operation::RotamerExplosion, core::pack::task::operation::DisallowIfNonnative, core::pack::task::operation::RestrictAbsentCanonicalAAS, protocols::enzdes::AddLigandMotifRotamers, core::pack::task::operation::RestrictResidueToRepacking, protocols::enzdes::AddRigidBodyLigandConfs, protocols::denovo_design::task_operations::ConsensusLoopDesignOperation, core::pack::task::operation::RestrictToRepacking, protocols::flxbb::LayerDesignOperation, protocols::enzdes::ProteinLigandInterfaceUpweighter, protocols::splice::SampleRotamersFromPDB, protocols::task_operations::LimitAromaChi2Operation, core::pack::task::operation::ProhibitResidueProperties, protocols::task_operations::RestrictConservedLowDdgOperation, protocols::simple_task_operations::RestrictToInterface, core::pack::task::operation::RestrictToResidueProperties, protocols::task_operations::PruneBuriedUnsatsOperation, protocols::task_operations::DsspDesignOperation, core::pack::task::operation::ProhibitSpecifiedBaseResidueTypes, core::pack::task::operation::DesignRestrictions, protocols::enzdes::DetectProteinLigandInterface, protocols::task_operations::RestrictToInterfaceVectorOperation, core::pack::task::operation::OperateOnResidueSubset, protocols::antibody::task_operations::AddCDRProfilesOperation, protocols::task_operations::ImportUnboundRotamersOperation, protocols::antibody::task_operations::RestrictToCDRsAndNeighbors, core::pack::task::operation::OperateOnCertainResidues, protocols::hotspot_hashing::AddSearchPatternRotSetOp, core::pack::task::operation::ClashBasedRepackShell, core::pack::task::operation::RestrictToSpecifiedBaseResidueTypes, protocols::dna::RestrictDesignToProteinDNAInterface, protocols::task_operations::ReadResfileFromDB, protocols::antibody::task_operations::AddCDRProfileSetsOperation, protocols::task_operations::ProteinInterfaceDesignOperation, protocols::task_operations::SeqprofConsensusOperation, protocols::antibody::task_operations::DisableCDRsOperation, protocols::antibody::task_operations::DisableAntibodyRegionOperation, protocols::task_operations::JointSequenceOperation, protocols::task_operations::RestrictToTerminiOperation, protocols::task_operations::ResidueProbDesignOperation, protocols::task_operations::LinkResidues, protocols::task_operations::RestrictResiduesToRepackingOperation, core::pack::task::operation::RestrictInteractionGraphThreadsOperation, protocols::legacy_sewing::LegacyReadNativeRotamersFile, protocols::task_operations::RestrictNativeResiduesOperation, protocols::splice::DesignInterfacesOperation, protocols::task_operations::DesignAroundOperation, protocols::task_operations::PreventResiduesFromRepackingOperation, protocols::task_operations::ThreadSequenceOperation, protocols::task_operations::ConservativeDesignOperation, protocols::enzdes::SetCatalyticResPackBehavior, protocols::matdes::BuildingBlockInterfaceOperation, protocols::task_operations::RestrictIdentitiesOperation, protocols::pack_interface::ProteinProteinInterfaceUpweighter, protocols::task_operations::CrystalContactsOperation, protocols::task_operations::SequenceMotifTaskOperation, protocols::simple_task_operations::RestrictToLoopsAndNeighbors, protocols::task_operations::PreventChainFromRepackingOperation, protocols::task_operations::RestrictChainToRepackingOperation, protocols::hbnet::ConstrainHBondNetwork, protocols::task_operations::AlignedThreadOperation, protocols::task_operations::RestrictToAlignedSegmentsOperation, protocols::simple_task_operations::RestrictToLoops, protocols::task_operations::InteractingRotamerExplosion, protocols::task_operations::RestrictIdentitiesAtAlignedPositionsOperation, protocols::task_operations::SelectResiduesWithinChainOperation, protocols::task_operations::RestrictNonSurfaceToRepackingOperation, protocols::task_operations::ResfileCommandOperation, protocols::splice::FindEndpointsOperation, protocols::task_operations::RetrieveStoredTaskOperation, protocols::task_operations::ModifyAnnealer, protocols::task_operations::SelectBySASAOperation, protocols::task_operations::DatabaseThread, protocols::task_operations::SelectByDeltaScoreOperation, protocols::task_operations::SetIGTypeOperation, core::pack::task::operation::EnableMultiCoolAnnealer, core::pack::task::operation::EnableSmartAnnealer, protocols::task_operations::SelectByDensityFitOperation, core::pack::task::operation::FillAUTOTaskOperation, core::pack::task::operation::KeepSequenceSymmetry, protocols::task_operations::pHVariantTaskOperation, protocols::dna::WatsonCrickRotamerCouplings, and protocols::forge::remodel::RemodelRotamerLinks.

References core::pack::task::operation::TR().

void core::pack::task::operation::TaskOperation::provide_citation_info ( basic::citation_manager::CitationCollectionList &  ) const
virtual

Provide citations to the passed CitationCollectionList Subclasses should add the info for themselves and any other classes they use.

The default implementation of this function does nothing. It may be overriden by task operations wishing to provide citation information.


The documentation for this class was generated from the following files: