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VarLengthBuild.cc File Reference

Component that performs a simplified version of a protocol for variable length remodeling of protein backbone segments. More...

#include <protocols/forge/components/VarLengthBuild.hh>
#include <protocols/forge/remodel/RemodelEnzdesCstModule.fwd.hh>
#include <protocols/forge/remodel/RemodelEnzdesCstModule.hh>
#include <protocols/toolbox/match_enzdes_util/EnzdesCacheableObserver.hh>
#include <protocols/toolbox/match_enzdes_util/EnzdesCstCache.hh>
#include <core/pose/datacache/ObserverCache.hh>
#include <core/pose/datacache/CacheableObserverType.hh>
#include <protocols/forge/build/BuildInstruction.hh>
#include <protocols/forge/build/Interval.hh>
#include <protocols/forge/remodel/RemodelConstraintGenerator.hh>
#include <protocols/forge/remodel/RemodelLoopMover.hh>
#include <protocols/forge/methods/chainbreak_eval.hh>
#include <protocols/forge/methods/fold_tree_functions.hh>
#include <protocols/forge/methods/fragment_functions.hh>
#include <protocols/forge/methods/pose_mod.hh>
#include <protocols/forge/methods/util.hh>
#include <core/chemical/ResidueTypeSet.hh>
#include <core/pose/symmetry/util.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/remodel.OptionKeys.gen.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/enzdes.OptionKeys.gen.hh>
#include <basic/options/keys/symmetry.OptionKeys.gen.hh>
#include <basic/options/keys/constraints.OptionKeys.gen.hh>
#include <protocols/constraint_movers/ConstraintSetMover.hh>
#include <protocols/symmetry/SetupForSymmetryMover.hh>
#include <core/chemical/ResidueType.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/chemical/ResidueTypeFinder.hh>
#include <core/fragment/ConstantLengthFragSet.hh>
#include <core/fragment/Frame.hh>
#include <core/fragment/FrameIteratorWorker_.hh>
#include <core/fragment/IndependentBBTorsionSRFD.hh>
#include <core/fragment/OrderedFragSet.hh>
#include <core/fragment/picking_old/FragmentLibraryManager.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/pose/Pose.hh>
#include <core/pose/PDBInfo.hh>
#include <core/chemical/VariantType.hh>
#include <core/scoring/Energies.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/id/SequenceMapping.hh>
#include <basic/Tracer.hh>
#include <core/fragment/picking_old/vall/util.hh>
#include <protocols/loops/Loops.hh>
#include <protocols/loops/loop_mover/IndependentLoopMover.hh>
#include <protocols/loops/LoopMoverFactory.hh>
#include <utility>
#include <utility/vector1.hh>
#include <core/fragment/FrameIterator.hh>
#include <core/util/SwitchResidueTypeSet.hh>

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::forge
 
 protocols::forge::components
 

Functions

static basic::Tracer protocols::forge::components::TR ("protocols.forge.components.VarLengthBuild")
 

Detailed Description

Component that performs a simplified version of a protocol for variable length remodeling of protein backbone segments.

Author
Yih-En Andrew Ban (yab@u.nosp@m..was.nosp@m.hingt.nosp@m.on.e.nosp@m.du)